RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 GPS2Q13227 327 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 MUM1L1Q5H9M0 696 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 STK11IPQ8N1F8 1099 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 CCDC34Q96HJ3 373 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 WDR24Q96S15 920 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 MTA3Q9BTC8 594 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 TSPYL1Q9H0U9 437 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 CNNM2Q9H8M5 875 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 FAM217BQ9NTX9 383 aaPredicted RBP10.01□□□□□ -0.81
TDP1-204ENST00000545686 FBXO2Q9UK22 296 aaPredicted RBP10.01□□□□□ -0.81
TDP1-204ENST00000545686 CEP131Q9UPN4 1083 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 ITGB4P16144 1822 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 A0A1B0GTH6 734 aa10□□□□□ -0.81
TDP1-204ENST00000545686 B4E1Z4 1266 aa10□□□□□ -0.81
TDP1-204ENST00000545686 POTEB2H3BUK9 544 aa10□□□□□ -0.81
TDP1-204ENST00000545686 CCDC175P0C221 793 aa10□□□□□ -0.81
TDP1-204ENST00000545686 PLCD1P51178 756 aa10□□□□□ -0.81
TDP1-204ENST00000545686 SLC20A2Q08357 652 aa10□□□□□ -0.81
TDP1-204ENST00000545686 BRD3Q15059 726 aa10□□□□□ -0.81
TDP1-204ENST00000545686 TMEM67Q5HYA8 995 aa10□□□□□ -0.81
TDP1-204ENST00000545686 SLC9C2Q5TAH2 1124 aa10□□□□□ -0.81
TDP1-204ENST00000545686 NFXL1Q6ZNB6 911 aa10□□□□□ -0.81
TDP1-204ENST00000545686 PROSER2Q86WR7 435 aaPredicted RBP10□□□□□ -0.81
TDP1-204ENST00000545686 ZBTB38Q8NAP3 1195 aaPredicted RBP10□□□□□ -0.81
TDP1-204ENST00000545686 SPATA20Q8TB22 786 aa10□□□□□ -0.81
TDP1-204ENST00000545686 RIPOR2Q9Y4F9 1068 aa10□□□□□ -0.81
TDP1-204ENST00000545686 TULP2O00295 520 aa10□□□□□ -0.81
TDP1-204ENST00000545686 UQCRFS1P1P0C7P4 283 aa10□□□□□ -0.81
TDP1-204ENST00000545686 CDK11BP21127 795 aaKnown RBP10□□□□□ -0.81
TDP1-204ENST00000545686 ARID4AP29374 1257 aaPredicted RBP10□□□□□ -0.81
TDP1-204ENST00000545686 GOLGA8FQ08AF8 430 aa10□□□□□ -0.81
TDP1-204ENST00000545686 GOLGA8DPQ0D2H9 430 aa10□□□□□ -0.81
TDP1-204ENST00000545686 NR1I3Q14994 352 aa10□□□□□ -0.81
TDP1-204ENST00000545686 METTL24Q5JXM2 366 aa10□□□□□ -0.81
TDP1-204ENST00000545686 PI16Q6UXB8 463 aa10□□□□□ -0.81
TDP1-204ENST00000545686 TOGARAM2Q6ZUX3 1019 aa10□□□□□ -0.81
TDP1-204ENST00000545686 TRIM22Q8IYM9 498 aa10□□□□□ -0.81
TDP1-204ENST00000545686 MSL3Q8N5Y2 521 aaKnown RBP10□□□□□ -0.81
TDP1-204ENST00000545686 PDILTQ8N807 584 aa10□□□□□ -0.81
TDP1-204ENST00000545686 SLC12A7Q9Y666 1083 aa10□□□□□ -0.81
TDP1-204ENST00000545686 TCRBV5S4A2TA0A5A2 114 aa9.99□□□□□ -0.81
TDP1-204ENST00000545686 SEMA3EO15041 775 aa9.99□□□□□ -0.81
TDP1-204ENST00000545686 PDE6AP16499 860 aa9.99□□□□□ -0.81
TDP1-204ENST00000545686 OAS2P29728 719 aaKnown RBP9.99□□□□□ -0.81
TDP1-204ENST00000545686 TXLNAP40222 546 aa9.99□□□□□ -0.81
TDP1-204ENST00000545686 FMR1Q06787 632 aaKnown RBP eCLIP9.99□□□□□ -0.81
TDP1-204ENST00000545686 SMC1AQ14683 1233 aaKnown RBP9.99□□□□□ -0.81
TDP1-204ENST00000545686 KIF6Q6ZMV9 814 aa9.99□□□□□ -0.81
TDP1-204ENST00000545686 VGLL2Q8N8G2 317 aa9.99□□□□□ -0.81
TDP1-204ENST00000545686 ZCRB1Q8TBF4 217 aaKnown RBP9.99□□□□□ -0.81
TDP1-204ENST00000545686 SLC26A6Q9BXS9 759 aa9.99□□□□□ -0.81
TDP1-204ENST00000545686 KRT23Q9C075 422 aa9.99□□□□□ -0.81
TDP1-204ENST00000545686 PSD3Q9NYI0 1048 aa9.99□□□□□ -0.81
TDP1-204ENST00000545686 SRPRBQ9Y5M8 271 aaKnown RBP9.99□□□□□ -0.81
TDP1-204ENST00000545686 BCL9LQ86UU0 1499 aa9.99□□□□□ -0.81
TDP1-204ENST00000545686 NHSL1Q5SYE7 1610 aa9.99□□□□□ -0.81
TDP1-204ENST00000545686 ABCA3Q99758 1704 aa9.99□□□□□ -0.81
TDP1-204ENST00000545686 AKR1B15C9JRZ8 316 aaPredicted RBP9.99□□□□□ -0.81
TDP1-204ENST00000545686 ACTN4O43707 911 aaKnown RBP9.99□□□□□ -0.81
TDP1-204ENST00000545686 SASH3O75995 380 aa9.99□□□□□ -0.81
TDP1-204ENST00000545686 SEC31AO94979 1220 aaKnown RBP9.99□□□□□ -0.81
TDP1-204ENST00000545686 RXRAP19793 462 aa9.99□□□□□ -0.81
TDP1-204ENST00000545686 TOB1P50616 345 aaPredicted RBP9.99□□□□□ -0.81
TDP1-204ENST00000545686 DIS3L2Q8IYB7 885 aaKnown RBP9.99□□□□□ -0.81
TDP1-204ENST00000545686 HNRNPLLQ8WVV9 542 aaKnown RBP9.99□□□□□ -0.81
TDP1-204ENST00000545686 STRBPQ96SI9 672 aaKnown RBP9.99□□□□□ -0.81
TDP1-204ENST00000545686 PIH1D3Q9NQM4 214 aaKnown RBP9.99□□□□□ -0.81
TDP1-204ENST00000545686 DENND2AQ9ULE3 1009 aa9.99□□□□□ -0.81
TDP1-204ENST00000545686 ZNF532Q9HCE3 1301 aa9.99□□□□□ -0.81
TDP1-204ENST00000545686 STRCP1A6NGW2 1772 aa9.99□□□□□ -0.81
TDP1-204ENST00000545686 FOXN1O15353 648 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 POLR2DO15514 142 aaKnown RBP9.98□□□□□ -0.81
TDP1-204ENST00000545686 DEXIO95424 95 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 APPP05067 770 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 SRGAP1Q7Z6B7 1085 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 CEP112Q8N8E3 955 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 AIDAQ96BJ3 306 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 DHX58Q96C10 678 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 CCDC51Q96ER9 411 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 CTAGE1Q96RT6 745 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 FUT8Q9BYC5 575 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 PARD6BQ9BYG5 372 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 SENP2Q9HC62 589 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 CCDC196A0A1B0GTZ2 297 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 IFIT3O14879 490 aaKnown RBP9.98□□□□□ -0.81
TDP1-204ENST00000545686 FECHP22830 423 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 ADKP55263 362 aaKnown RBP9.98□□□□□ -0.81
TDP1-204ENST00000545686 SART3Q15020 963 aaKnown RBP9.98□□□□□ -0.81
TDP1-204ENST00000545686 CHRNA2Q15822 529 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 FAM177A1Q8N128 213 aaPredicted RBP9.98□□□□□ -0.81
TDP1-204ENST00000545686 NKX2-3Q8TAU0 364 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 CCDC12Q8WUD4 166 aaPredicted RBP9.98□□□□□ -0.81
TDP1-204ENST00000545686 EXOC4Q96A65 974 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 TEX13AQ9BXU3 409 aaPredicted RBP9.98□□□□□ -0.81
TDP1-204ENST00000545686 PODXL2Q9NZ53 605 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 SERTAD1Q9UHV2 236 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 LAMB2P55268 1798 aa9.98□□□□□ -0.81
TDP1-204ENST00000545686 ITIH6Q6UXX5 1313 aa9.97□□□□□ -0.81
TDP1-204ENST00000545686 ANKRD18BA2A2Z9 1011 aa9.97□□□□□ -0.81
TDP1-204ENST00000545686 BTBD18B2RXH4 712 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms