RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 FSD1Q9BTV5 496 aa14.28□□□□□ -0.12
LTBR-214ENST00000545445 MAP4K4O95819 1239 aaPredicted RBP14.27□□□□□ -0.13
LTBR-214ENST00000545445 SDSP20132 328 aa14.27□□□□□ -0.13
LTBR-214ENST00000545445 GTF2A2P52657 109 aa14.27□□□□□ -0.13
LTBR-214ENST00000545445 LACTBP83111 547 aaPredicted RBP14.27□□□□□ -0.13
LTBR-214ENST00000545445 UBE3CQ15386 1083 aa14.27□□□□□ -0.13
LTBR-214ENST00000545445 MTFR1Q15390 333 aa14.27□□□□□ -0.13
LTBR-214ENST00000545445 GRIK5Q16478 980 aa14.27□□□□□ -0.13
LTBR-214ENST00000545445 SPDYE2Q495Y8 402 aa14.27□□□□□ -0.13
LTBR-214ENST00000545445 SLC9C2Q5TAH2 1124 aa14.27□□□□□ -0.13
LTBR-214ENST00000545445 ZNF70Q9UC06 446 aaPredicted RBP14.27□□□□□ -0.13
LTBR-214ENST00000545445 GAKO14976 1311 aa14.26□□□□□ -0.13
LTBR-214ENST00000545445 PDE6AP16499 860 aa14.26□□□□□ -0.13
LTBR-214ENST00000545445 ADD2P35612 726 aa14.26□□□□□ -0.13
LTBR-214ENST00000545445 CRKP46108 304 aa14.26□□□□□ -0.13
LTBR-214ENST00000545445 TNFAIP1Q13829 316 aa14.26□□□□□ -0.13
LTBR-214ENST00000545445 SKAP1Q86WV1 359 aa14.26□□□□□ -0.13
LTBR-214ENST00000545445 MAGEB6Q8N7X4 407 aa14.26□□□□□ -0.13
LTBR-214ENST00000545445 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.26□□□□□ -0.13
LTBR-214ENST00000545445 ZDHHC15Q96MV8 337 aa14.26□□□□□ -0.13
LTBR-214ENST00000545445 TEPSINQ96N21 525 aa14.26□□□□□ -0.13
LTBR-214ENST00000545445 NOL10Q9BSC4 688 aaKnown RBP14.26□□□□□ -0.13
LTBR-214ENST00000545445 TMEM39BQ9GZU3 492 aa14.26□□□□□ -0.13
LTBR-214ENST00000545445 TDRD3Q9H7E2 651 aaKnown RBP14.26□□□□□ -0.13
LTBR-214ENST00000545445 MROH7-TTC4A0A0A0MT08 1334 aa14.25□□□□□ -0.13
LTBR-214ENST00000545445 TCP10L2B9ZVM9 353 aa14.25□□□□□ -0.13
LTBR-214ENST00000545445 RNF113AO15541 343 aaKnown RBP14.25□□□□□ -0.13
LTBR-214ENST00000545445 TLR2O60603 784 aa14.25□□□□□ -0.13
LTBR-214ENST00000545445 BAG3O95817 575 aa14.25□□□□□ -0.13
LTBR-214ENST00000545445 CYP7A1P22680 504 aa14.25□□□□□ -0.13
LTBR-214ENST00000545445 MAP3K9P80192 1104 aa14.25□□□□□ -0.13
LTBR-214ENST00000545445 KIF22Q14807 665 aa14.25□□□□□ -0.13
LTBR-214ENST00000545445 PRO3102Q9H379 93 aa14.25□□□□□ -0.13
LTBR-214ENST00000545445 CSADQ9Y600 493 aa14.25□□□□□ -0.13
LTBR-214ENST00000545445 A0A0C4DFX4 3053 aa14.25□□□□□ -0.13
LTBR-214ENST00000545445 COL6A3P12111 3177 aa14.24□□□□□ -0.13
LTBR-214ENST00000545445 ZNF532Q9HCE3 1301 aa14.24□□□□□ -0.13
LTBR-214ENST00000545445 GPR75-ASB3A0A0A6YYF3 556 aa14.24□□□□□ -0.13
LTBR-214ENST00000545445 TCRBV5S4A2TA0A5A2 114 aa14.24□□□□□ -0.13
LTBR-214ENST00000545445 BTBD19C9JJ37 291 aa14.24□□□□□ -0.13
LTBR-214ENST00000545445 WDHD1O75717 1129 aaPredicted RBP14.24□□□□□ -0.13
LTBR-214ENST00000545445 PLCG2P16885 1265 aa14.24□□□□□ -0.13
LTBR-214ENST00000545445 DIXDC1Q155Q3 683 aa14.24□□□□□ -0.13
LTBR-214ENST00000545445 ZNF384Q8TF68 577 aa14.24□□□□□ -0.13
LTBR-214ENST00000545445 APPBP2Q92624 585 aa14.24□□□□□ -0.13
LTBR-214ENST00000545445 DAGLAQ9Y4D2 1042 aa14.24□□□□□ -0.13
LTBR-214ENST00000545445 DOCK2Q92608 1830 aa14.24□□□□□ -0.13
LTBR-214ENST00000545445 SPDYE5A6NIY4 337 aa14.23□□□□□ -0.13
LTBR-214ENST00000545445 CTGFP29279 349 aa14.23□□□□□ -0.13
LTBR-214ENST00000545445 PPP4CP60510 307 aa14.23□□□□□ -0.13
LTBR-214ENST00000545445 UBE2Q1Q7Z7E8 422 aa14.23□□□□□ -0.13
LTBR-214ENST00000545445 DIAPH3Q9NSV4 1193 aa14.23□□□□□ -0.13
LTBR-214ENST00000545445 SNCAIPQ9Y6H5 919 aa14.23□□□□□ -0.13
LTBR-214ENST00000545445 MAST2Q6P0Q8 1798 aa14.22□□□□□ -0.13
LTBR-214ENST00000545445 SOX1O00570 391 aaPredicted RBP14.22□□□□□ -0.13
LTBR-214ENST00000545445 CETPP11597 493 aa14.22□□□□□ -0.13
LTBR-214ENST00000545445 ZMYM1Q5SVZ6 1142 aa14.22□□□□□ -0.13
LTBR-214ENST00000545445 APOBEC3HQ6NTF7 200 aaKnown RBP14.22□□□□□ -0.13
LTBR-214ENST00000545445 CASC1Q6TDU7 716 aa14.22□□□□□ -0.13
LTBR-214ENST00000545445 RUFY2Q8WXA3 655 aa14.22□□□□□ -0.13
LTBR-214ENST00000545445 TRIM47Q96LD4 638 aa14.22□□□□□ -0.13
LTBR-214ENST00000545445 HTATIP2Q9BUP3 242 aa14.22□□□□□ -0.13
LTBR-214ENST00000545445 HELLSQ9NRZ9 838 aa14.22□□□□□ -0.13
LTBR-214ENST00000545445 CPA4Q9UI42 421 aa14.22□□□□□ -0.13
LTBR-214ENST00000545445 LAMA3Q16787 3333 aa14.22□□□□□ -0.13
LTBR-214ENST00000545445 MAGEB6P1A0A0J9YX57 407 aa14.21□□□□□ -0.13
LTBR-214ENST00000545445 IRF6O14896 467 aa14.21□□□□□ -0.13
LTBR-214ENST00000545445 GNRH1P01148 92 aa14.21□□□□□ -0.13
LTBR-214ENST00000545445 CCL5P13501 91 aa14.21□□□□□ -0.13
LTBR-214ENST00000545445 BTDP43251 543 aa14.21□□□□□ -0.13
LTBR-214ENST00000545445 MFAP1P55081 439 aaKnown RBP14.21□□□□□ -0.13
LTBR-214ENST00000545445 PRMT2P55345 433 aa14.21□□□□□ -0.13
LTBR-214ENST00000545445 SNAPC2Q13487 334 aa14.21□□□□□ -0.13
LTBR-214ENST00000545445 WRNIP1Q96S55 665 aa14.21□□□□□ -0.13
LTBR-214ENST00000545445 TMOD2Q9NZR1 351 aa14.21□□□□□ -0.13
LTBR-214ENST00000545445 SRRDQ9UH36 339 aa14.21□□□□□ -0.13
LTBR-214ENST00000545445 CDC45O75419 566 aa14.2□□□□□ -0.14
LTBR-214ENST00000545445 OSBPP22059 807 aa14.2□□□□□ -0.14
LTBR-214ENST00000545445 CHMLP26374 656 aa14.2□□□□□ -0.14
LTBR-214ENST00000545445 GRK4P32298 578 aa14.2□□□□□ -0.14
LTBR-214ENST00000545445 PSMC4P43686 418 aa14.2□□□□□ -0.14
LTBR-214ENST00000545445 GJA8P48165 433 aa14.2□□□□□ -0.14
LTBR-214ENST00000545445 TNNI2P48788 182 aa14.2□□□□□ -0.14
LTBR-214ENST00000545445 CACNB3P54284 484 aa14.2□□□□□ -0.14
LTBR-214ENST00000545445 MCMDC2Q4G0Z9 681 aa14.2□□□□□ -0.14
LTBR-214ENST00000545445 FKBP1CQ5VVH2 108 aa14.2□□□□□ -0.14
LTBR-214ENST00000545445 ADGRA1Q86SQ6 560 aa14.2□□□□□ -0.14
LTBR-214ENST00000545445 ERO1BQ86YB8 467 aa14.2□□□□□ -0.14
LTBR-214ENST00000545445 NKX2-3Q8TAU0 364 aa14.2□□□□□ -0.14
LTBR-214ENST00000545445 RAET1EQ8TD07 263 aa14.2□□□□□ -0.14
LTBR-214ENST00000545445 ZKSCAN4Q969J2 545 aaPredicted RBP14.2□□□□□ -0.14
LTBR-214ENST00000545445 OSBP2Q969R2 916 aa14.2□□□□□ -0.14
LTBR-214ENST00000545445 LRCH3Q96II8 777 aa14.2□□□□□ -0.14
LTBR-214ENST00000545445 ZCCHC17Q9NP64 241 aaKnown RBP14.2□□□□□ -0.14
LTBR-214ENST00000545445 NR2E3Q9Y5X4 410 aa14.2□□□□□ -0.14
LTBR-214ENST00000545445 CUL9Q8IWT3 2517 aa14.2□□□□□ -0.14
LTBR-214ENST00000545445 MYPNQ86TC9 1320 aa14.19□□□□□ -0.14
LTBR-214ENST00000545445 RAD50Q92878 1312 aa14.19□□□□□ -0.14
LTBR-214ENST00000545445 NPM3O75607 178 aaKnown RBP14.19□□□□□ -0.14
LTBR-214ENST00000545445 FARP2O94887 1054 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms