RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 SLAIN1Q8ND83 568 aa17.34■□□□□ 0.37
DDX11-228ENST00000545115 SHISA4Q96DD7 197 aa17.34■□□□□ 0.37
DDX11-228ENST00000545115 TBC1D2Q9BYX2 928 aa17.34■□□□□ 0.37
DDX11-228ENST00000545115 BIN2Q9UBW5 565 aaPredicted RBP17.34■□□□□ 0.37
DDX11-228ENST00000545115 HERC5Q9UII4 1024 aaKnown RBP17.34■□□□□ 0.37
DDX11-228ENST00000545115 PNMA3Q9UL41 463 aa17.34■□□□□ 0.37
DDX11-228ENST00000545115 MAST2Q6P0Q8 1798 aa17.33■□□□□ 0.37
DDX11-228ENST00000545115 BAG3O95817 575 aa17.33■□□□□ 0.36
DDX11-228ENST00000545115 PLCG2P16885 1265 aa17.33■□□□□ 0.36
DDX11-228ENST00000545115 NAA16Q6N069 864 aaPredicted RBP17.33■□□□□ 0.36
DDX11-228ENST00000545115 SH3RF3Q8TEJ3 882 aaPredicted RBP17.33■□□□□ 0.36
DDX11-228ENST00000545115 DBNDD2Q9BQY9 259 aa17.33■□□□□ 0.36
DDX11-228ENST00000545115 DHX36Q9H2U1 1008 aaKnown RBP17.33■□□□□ 0.36
DDX11-228ENST00000545115 SNRKQ9NRH2 765 aa17.33■□□□□ 0.36
DDX11-228ENST00000545115 AATFQ9NY61 560 aaKnown RBP eCLIP17.33■□□□□ 0.36
DDX11-228ENST00000545115 GABRQQ9UN88 632 aa17.33■□□□□ 0.36
DDX11-228ENST00000545115 MGAMO43451 1857 aa17.33■□□□□ 0.36
DDX11-228ENST00000545115 TNPO2O14787 897 aaKnown RBP17.32■□□□□ 0.36
DDX11-228ENST00000545115 IGSF3O75054 1194 aa17.32■□□□□ 0.36
DDX11-228ENST00000545115 SURF6O75683 361 aaKnown RBP17.32■□□□□ 0.36
DDX11-228ENST00000545115 GJB1P08034 283 aa17.32■□□□□ 0.36
DDX11-228ENST00000545115 CCL5P13501 91 aa17.32■□□□□ 0.36
DDX11-228ENST00000545115 CAP2P40123 477 aa17.32■□□□□ 0.36
DDX11-228ENST00000545115 GJA8P48165 433 aa17.32■□□□□ 0.36
DDX11-228ENST00000545115 HNRNPUQ00839 825 aaKnown RBP eCLIP17.32■□□□□ 0.36
DDX11-228ENST00000545115 SPP2Q13103 211 aa17.32■□□□□ 0.36
DDX11-228ENST00000545115 TREML2Q5T2D2 321 aa17.32■□□□□ 0.36
DDX11-228ENST00000545115 ZNF280CQ8ND82 737 aa17.32■□□□□ 0.36
DDX11-228ENST00000545115 ZNF512BQ96KM6 892 aaPredicted RBP17.32■□□□□ 0.36
DDX11-228ENST00000545115 RNF208Q9H0X6 261 aa17.32■□□□□ 0.36
DDX11-228ENST00000545115 C1orf115Q9H7X2 142 aa17.32■□□□□ 0.36
DDX11-228ENST00000545115 FLT3LGP49771 235 aa17.31■□□□□ 0.36
DDX11-228ENST00000545115 FAM110CQ1W6H9 321 aa17.31■□□□□ 0.36
DDX11-228ENST00000545115 ITPRIPQ8IWB1 547 aa17.31■□□□□ 0.36
DDX11-228ENST00000545115 ANKRD13CQ8N6S4 541 aa17.31■□□□□ 0.36
DDX11-228ENST00000545115 PI4KBQ9UBF8 816 aa17.31■□□□□ 0.36
DDX11-228ENST00000545115 LOC285556D6RIA3 1793 aa17.3■□□□□ 0.36
DDX11-228ENST00000545115 USP17L5A8MUK1 530 aa17.3■□□□□ 0.36
DDX11-228ENST00000545115 ADCY3O60266 1144 aa17.3■□□□□ 0.36
DDX11-228ENST00000545115 CYP2E1P05181 493 aaPredicted RBP17.3■□□□□ 0.36
DDX11-228ENST00000545115 HMGCS2P54868 508 aa17.3■□□□□ 0.36
DDX11-228ENST00000545115 PPP4CP60510 307 aa17.3■□□□□ 0.36
DDX11-228ENST00000545115 PABPC4Q13310 644 aaKnown RBP eCLIP17.3■□□□□ 0.36
DDX11-228ENST00000545115 IRF5Q13568 498 aa17.3■□□□□ 0.36
DDX11-228ENST00000545115 PXYLP1Q8TE99 480 aa17.3■□□□□ 0.36
DDX11-228ENST00000545115 AS3MTQ9HBK9 375 aa17.3■□□□□ 0.36
DDX11-228ENST00000545115 NOP58Q9Y2X3 529 aaKnown RBP17.3■□□□□ 0.36
DDX11-228ENST00000545115 FLT1P17948 1338 aa17.29■□□□□ 0.36
DDX11-228ENST00000545115 ATAD5Q96QE3 1844 aa17.29■□□□□ 0.36
DDX11-228ENST00000545115 ZBTB7BO15156 539 aaPredicted RBP17.29■□□□□ 0.36
DDX11-228ENST00000545115 ZAP70P43403 619 aa17.29■□□□□ 0.36
DDX11-228ENST00000545115 GCLCP48506 637 aaPredicted RBP17.29■□□□□ 0.36
DDX11-228ENST00000545115 RRP1BQ14684 758 aaKnown RBP17.29■□□□□ 0.36
DDX11-228ENST00000545115 SH3D19Q5HYK7 790 aa17.29■□□□□ 0.36
DDX11-228ENST00000545115 ADGRA1Q86SQ6 560 aa17.29■□□□□ 0.36
DDX11-228ENST00000545115 MAPKAPK5Q8IW41 473 aa17.29■□□□□ 0.36
DDX11-228ENST00000545115 U2AF1L4Q8WU68 220 aaKnown RBP17.29■□□□□ 0.36
DDX11-228ENST00000545115 TGFBRAP1Q8WUH2 860 aa17.29■□□□□ 0.36
DDX11-228ENST00000545115 COA7Q96BR5 231 aa17.29■□□□□ 0.36
DDX11-228ENST00000545115 DBNLQ9UJU6 430 aaKnown RBP17.29■□□□□ 0.36
DDX11-228ENST00000545115 ASNSP08243 561 aa17.28■□□□□ 0.36
DDX11-228ENST00000545115 RLBP1P12271 317 aa17.28■□□□□ 0.36
DDX11-228ENST00000545115 UNC93B1Q9H1C4 597 aa17.28■□□□□ 0.36
DDX11-228ENST00000545115 SIPA1L1O43166 1804 aa17.28■□□□□ 0.36
DDX11-228ENST00000545115 H0YGN5 161 aa17.27■□□□□ 0.36
DDX11-228ENST00000545115 INHAP05111 366 aa17.27■□□□□ 0.36
DDX11-228ENST00000545115 ELNP15502 786 aa17.27■□□□□ 0.36
DDX11-228ENST00000545115 UBE2Q1Q7Z7E8 422 aa17.27■□□□□ 0.36
DDX11-228ENST00000545115 METTL16Q86W50 562 aaKnown RBP17.27■□□□□ 0.36
DDX11-228ENST00000545115 FOXP4Q8IVH2 680 aaPredicted RBP17.27■□□□□ 0.36
DDX11-228ENST00000545115 CRACR2BQ8N4Y2 399 aaPredicted RBP17.27■□□□□ 0.36
DDX11-228ENST00000545115 HTATIP2Q9BUP3 242 aa17.27■□□□□ 0.36
DDX11-228ENST00000545115 TRIM34Q9BYJ4 488 aa17.27■□□□□ 0.36
DDX11-228ENST00000545115 ASCC2Q9H1I8 757 aaPredicted RBP17.27■□□□□ 0.36
DDX11-228ENST00000545115 DNAJC18Q9H819 358 aa17.27■□□□□ 0.36
DDX11-228ENST00000545115 PIH1D3Q9NQM4 214 aaKnown RBP17.27■□□□□ 0.36
DDX11-228ENST00000545115 TLR7Q9NYK1 1049 aaKnown RBP17.27■□□□□ 0.36
DDX11-228ENST00000545115 COLQQ9Y215 455 aaPredicted RBP17.27■□□□□ 0.36
DDX11-228ENST00000545115 MTMR2Q13614 643 aa17.26■□□□□ 0.35
DDX11-228ENST00000545115 DPF3Q92784 378 aa17.26■□□□□ 0.35
DDX11-228ENST00000545115 EAF2Q96CJ1 260 aaPredicted RBP17.26■□□□□ 0.35
DDX11-228ENST00000545115 WDR18Q9BV38 432 aa17.26■□□□□ 0.35
DDX11-228ENST00000545115 CCDC8Q9H0W5 538 aaPredicted RBP17.26■□□□□ 0.35
DDX11-228ENST00000545115 TAOK2Q9UL54 1235 aa17.26■□□□□ 0.35
DDX11-228ENST00000545115 PALD1Q9ULE6 856 aa17.26■□□□□ 0.35
DDX11-228ENST00000545115 FOCADQ5VW36 1801 aa17.26■□□□□ 0.35
DDX11-228ENST00000545115 FARP2O94887 1054 aaPredicted RBP17.25■□□□□ 0.35
DDX11-228ENST00000545115 SGPL1O95470 568 aa17.25■□□□□ 0.35
DDX11-228ENST00000545115 HLA-DOAP06340 250 aa17.25■□□□□ 0.35
DDX11-228ENST00000545115 CAPN2P17655 700 aa17.25■□□□□ 0.35
DDX11-228ENST00000545115 BACE1P56817 501 aa17.25■□□□□ 0.35
DDX11-228ENST00000545115 CEP85Q6P2H3 762 aa17.25■□□□□ 0.35
DDX11-228ENST00000545115 CERS3Q8IU89 383 aa17.25■□□□□ 0.35
DDX11-228ENST00000545115 GINM1Q9NU53 330 aa17.25■□□□□ 0.35
DDX11-228ENST00000545115 TMOD4Q9NZQ9 345 aa17.25■□□□□ 0.35
DDX11-228ENST00000545115 CDK5RAP2Q96SN8 1893 aa17.24■□□□□ 0.35
DDX11-228ENST00000545115 C19orf81C9J6K1 198 aa17.24■□□□□ 0.35
DDX11-228ENST00000545115 IDH1O75874 414 aaKnown RBP17.24■□□□□ 0.35
DDX11-228ENST00000545115 CYP7A1P22680 504 aa17.24■□□□□ 0.35
DDX11-228ENST00000545115 FXR1P51114 621 aaKnown RBP eCLIP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms