RNA–Protein interactions for RNA: ENST00000544596.5

ABCA13-207, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene ABCA13, Length 7,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-207ENST00000544596 UFL1O94874 794 aa9.02□□□□□ -0.96
ABCA13-207ENST00000544596 SLC4A1P02730 911 aa9.02□□□□□ -0.96
ABCA13-207ENST00000544596 ALDH1L2Q3SY69 923 aa9.02□□□□□ -0.96
ABCA13-207ENST00000544596 BEND3Q5T5X7 828 aa9.02□□□□□ -0.96
ABCA13-207ENST00000544596 LARGE2Q8N3Y3 721 aa9.02□□□□□ -0.96
ABCA13-207ENST00000544596 CCDC68Q9H2F9 335 aa9.02□□□□□ -0.96
ABCA13-207ENST00000544596 DDX21Q9NR30 783 aaKnown RBP eCLIP9.02□□□□□ -0.96
ABCA13-207ENST00000544596 TXKP42681 527 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 HP1BP3Q5SSJ5 553 aaPredicted RBP9.02□□□□□ -0.97
ABCA13-207ENST00000544596 ANKRD35Q8N283 1001 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 HDAC11Q96DB2 347 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 TNNI1P19237 187 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 NOP14P78316 857 aaKnown RBP9.02□□□□□ -0.97
ABCA13-207ENST00000544596 APOBRQ0VD83 1088 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 ATP2A3Q93084 1043 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 VPS16Q9H269 839 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 LMCD1Q9NZU5 365 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 PALM3A6NDB9 673 aaPredicted RBP9.02□□□□□ -0.97
ABCA13-207ENST00000544596 GNPATO15228 680 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 CAVIN2O95810 425 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 KRT81Q14533 505 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 ZSCAN23Q3MJ62 389 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 SYT10Q6XYQ8 523 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 TRIM50Q86XT4 487 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 SPDL1Q96EA4 605 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 MMS19Q96T76 1030 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 PAG1Q9NWQ8 432 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 IFNKQ9P0W0 207 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 FAM83GA6ND36 823 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 ARHGAP42A6NI28 874 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 SLC12A1Q13621 1099 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 MYCT1Q8N699 235 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 PRKAG2Q9UGJ0 569 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 PTPRCP08575 1304 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 LRMPQ12912 555 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 RDH13Q8NBN7 331 aa9.02□□□□□ -0.97
ABCA13-207ENST00000544596 SLFN5Q08AF3 891 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 MCUQ8NE86 351 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 RBSNQ9H1K0 784 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 A0A1B0GUL7 405 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 TBC1D8BQ0IIM8 1120 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 IQUBQ8NA54 791 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 RHPN1Q8TCX5 695 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 GANCQ8TET4 914 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 HAUS8Q9BT25 410 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 HNRNPCL2B2RXH8 293 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 HNRNPCL1O60812 293 aaKnown RBP9.01□□□□□ -0.97
ABCA13-207ENST00000544596 PHEXP78562 749 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 DNM1Q05193 864 aaKnown RBP9.01□□□□□ -0.97
ABCA13-207ENST00000544596 TRAPPC3LQ5T215 181 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 USP48Q86UV5 1035 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 CCDC105Q8IYK2 499 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 PLEKHA4Q9H4M7 779 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 TRPC6Q9Y210 931 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 IRS4O14654 1257 aaPredicted RBP9.01□□□□□ -0.97
ABCA13-207ENST00000544596 GNAT2P19087 354 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 KLHL7Q8IXQ5 586 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 MORC4Q8TE76 937 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 PSMB7Q99436 277 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 RBM28Q9NW13 759 aaKnown RBP9.01□□□□□ -0.97
ABCA13-207ENST00000544596 DKC1O60832 514 aaKnown RBP eCLIP9.01□□□□□ -0.971e-5■■□□□ 13.2
ABCA13-207ENST00000544596 ANKRD20A3Q5VUR7 823 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 C8orf74Q6P047 294 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 SND1Q7KZF4 910 aaKnown RBP eCLIP9.01□□□□□ -0.97
ABCA13-207ENST00000544596 TAB3Q8N5C8 712 aaPredicted RBP9.01□□□□□ -0.97
ABCA13-207ENST00000544596 EFCC1Q9HA90 598 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 PIK3R4Q99570 1358 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 RUFY3Q7L099 469 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 PHLDB2Q86SQ0 1253 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.01□□□□□ -0.97
ABCA13-207ENST00000544596 RSAD2Q8WXG1 361 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 HMGB1P1B2RPK0 211 aaPredicted RBP9.01□□□□□ -0.97
ABCA13-207ENST00000544596 CFBP00751 764 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 COG7P83436 770 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 UVSSAQ2YD98 709 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 ARHGAP24Q8N264 748 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 FAM71BQ8TC56 605 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 TMX3Q96JJ7 454 aa9.01□□□□□ -0.97
ABCA13-207ENST00000544596 EXOC3O60645 756 aa9□□□□□ -0.97
ABCA13-207ENST00000544596 GIGYF1O75420 1035 aaPredicted RBP9□□□□□ -0.97
ABCA13-207ENST00000544596 GCNT3O95395 438 aa9□□□□□ -0.97
ABCA13-207ENST00000544596 ARHGAP44Q17R89 818 aa9□□□□□ -0.97
ABCA13-207ENST00000544596 PNMA8AQ86V59 439 aaPredicted RBP9□□□□□ -0.97
ABCA13-207ENST00000544596 PGBD1Q96JS3 809 aa9□□□□□ -0.97
ABCA13-207ENST00000544596 ANGPTL3Q9Y5C1 460 aa9□□□□□ -0.97
ABCA13-207ENST00000544596 RARSP54136 660 aaKnown RBP9□□□□□ -0.97
ABCA13-207ENST00000544596 TSNAXIP1Q2TAA8 658 aa9□□□□□ -0.97
ABCA13-207ENST00000544596 CAPN12Q6ZSI9 719 aa9□□□□□ -0.97
ABCA13-207ENST00000544596 CNGA4Q8IV77 575 aa9□□□□□ -0.97
ABCA13-207ENST00000544596 PALM2Q8IXS6 379 aa9□□□□□ -0.97
ABCA13-207ENST00000544596 NME8Q8N427 588 aa9□□□□□ -0.97
ABCA13-207ENST00000544596 TBC1D2Q9BYX2 928 aa9□□□□□ -0.97
ABCA13-207ENST00000544596 ANKRD2Q9GZV1 360 aa9□□□□□ -0.97
ABCA13-207ENST00000544596 IGSF3O75054 1194 aa9□□□□□ -0.97
ABCA13-207ENST00000544596 P4HA1P13674 534 aa9□□□□□ -0.97
ABCA13-207ENST00000544596 HAUS3Q68CZ6 603 aa9□□□□□ -0.97
ABCA13-207ENST00000544596 SMYD2Q9NRG4 433 aa9□□□□□ -0.97
ABCA13-207ENST00000544596 STK38LQ9Y2H1 464 aa9□□□□□ -0.97
ABCA13-207ENST00000544596 NOLC1Q14978 699 aaKnown RBP eCLIP9□□□□□ -0.97
ABCA13-207ENST00000544596 VWA3BQ502W6 1294 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms