RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 OTUD7BQ6GQQ9 843 aa18.72■□□□□ 0.59
ECHDC2-223ENST00000542552 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.72■□□□□ 0.59
ECHDC2-223ENST00000542552 PALD1Q9ULE6 856 aa18.72■□□□□ 0.59
ECHDC2-223ENST00000542552 TTC41PQ6P2S7 1318 aa18.72■□□□□ 0.59
ECHDC2-223ENST00000542552 SALL3Q9BXA9 1300 aa18.72■□□□□ 0.59
ECHDC2-223ENST00000542552 DDX60LQ5H9U9 1706 aaKnown RBP18.71■□□□□ 0.59
ECHDC2-223ENST00000542552 FAM196BA6NMK8 535 aa18.71■□□□□ 0.59
ECHDC2-223ENST00000542552 PTPRAP18433 802 aa18.71■□□□□ 0.59
ECHDC2-223ENST00000542552 TSHZ3Q63HK5 1081 aa18.71■□□□□ 0.59
ECHDC2-223ENST00000542552 FOXP4Q8IVH2 680 aaPredicted RBP18.71■□□□□ 0.59
ECHDC2-223ENST00000542552 OTUD7AQ8TE49 926 aaPredicted RBP18.71■□□□□ 0.59
ECHDC2-223ENST00000542552 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.71■□□□□ 0.59
ECHDC2-223ENST00000542552 GPR25O00155 361 aa18.7■□□□□ 0.58
ECHDC2-223ENST00000542552 MOGSQ13724 837 aa18.7■□□□□ 0.58
ECHDC2-223ENST00000542552 RRP1BQ14684 758 aaKnown RBP18.7■□□□□ 0.58
ECHDC2-223ENST00000542552 UBE3CQ15386 1083 aa18.7■□□□□ 0.58
ECHDC2-223ENST00000542552 SLFNL1Q499Z3 407 aa18.7■□□□□ 0.58
ECHDC2-223ENST00000542552 PI4K2BQ8TCG2 481 aa18.7■□□□□ 0.58
ECHDC2-223ENST00000542552 DNAJC18Q9H819 358 aa18.7■□□□□ 0.58
ECHDC2-223ENST00000542552 PICK1Q9NRD5 415 aa18.7■□□□□ 0.58
ECHDC2-223ENST00000542552 SAP30BPQ9UHR5 308 aaKnown RBP18.7■□□□□ 0.58
ECHDC2-223ENST00000542552 ATAD5Q96QE3 1844 aa18.7■□□□□ 0.58
ECHDC2-223ENST00000542552 CXCL11O14625 94 aa18.69■□□□□ 0.58
ECHDC2-223ENST00000542552 CHGBP05060 677 aa18.69■□□□□ 0.58
ECHDC2-223ENST00000542552 USP5P45974 858 aa18.69■□□□□ 0.58
ECHDC2-223ENST00000542552 ANKRD45Q5TZF3 282 aa18.69■□□□□ 0.58
ECHDC2-223ENST00000542552 SMC5Q8IY18 1101 aa18.69■□□□□ 0.58
ECHDC2-223ENST00000542552 FAM43AQ8N2R8 423 aa18.69■□□□□ 0.58
ECHDC2-223ENST00000542552 ZNF296Q8WUU4 475 aaPredicted RBP18.69■□□□□ 0.58
ECHDC2-223ENST00000542552 RWDD1Q9H446 243 aaPredicted RBP18.69■□□□□ 0.58
ECHDC2-223ENST00000542552 ZCCHC17Q9NP64 241 aaKnown RBP18.69■□□□□ 0.58
ECHDC2-223ENST00000542552 AFG3L2Q9Y4W6 797 aa18.69■□□□□ 0.58
ECHDC2-223ENST00000542552 ZHX2Q9Y6X8 837 aa18.69■□□□□ 0.58
ECHDC2-223ENST00000542552 BTBD19C9JJ37 291 aa18.68■□□□□ 0.58
ECHDC2-223ENST00000542552 CAP2P40123 477 aa18.68■□□□□ 0.58
ECHDC2-223ENST00000542552 CRHR2Q13324 411 aa18.68■□□□□ 0.58
ECHDC2-223ENST00000542552 ZSCAN25Q6NSZ9 544 aa18.68■□□□□ 0.58
ECHDC2-223ENST00000542552 LCORLQ8N3X6 602 aa18.68■□□□□ 0.58
ECHDC2-223ENST00000542552 KBTBD3Q8NAB2 608 aa18.68■□□□□ 0.58
ECHDC2-223ENST00000542552 CRNKL1Q9BZJ0 848 aaKnown RBP18.68■□□□□ 0.58
ECHDC2-223ENST00000542552 PTPRFP10586 1907 aa18.68■□□□□ 0.58
ECHDC2-223ENST00000542552 NAV1Q8NEY1 1877 aa18.67■□□□□ 0.58
ECHDC2-223ENST00000542552 GLRX3O76003 335 aaKnown RBP18.67■□□□□ 0.58
ECHDC2-223ENST00000542552 IGHDP01880 384 aa18.67■□□□□ 0.58
ECHDC2-223ENST00000542552 HLA-DOAP06340 250 aa18.67■□□□□ 0.58
ECHDC2-223ENST00000542552 MX1P20591 662 aa18.67■□□□□ 0.58
ECHDC2-223ENST00000542552 EHD4Q9H223 541 aa18.67■□□□□ 0.58
ECHDC2-223ENST00000542552 STAP2Q9UGK3 403 aa18.67■□□□□ 0.58
ECHDC2-223ENST00000542552 ERC2O15083 957 aa18.66■□□□□ 0.58
ECHDC2-223ENST00000542552 ARMT1Q9H993 441 aa18.66■□□□□ 0.58
ECHDC2-223ENST00000542552 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.66■□□□□ 0.58
ECHDC2-223ENST00000542552 A0A0G2JLL6 359 aaPredicted RBP18.65■□□□□ 0.58
ECHDC2-223ENST00000542552 FKTNO75072 461 aa18.65■□□□□ 0.58
ECHDC2-223ENST00000542552 MBD4O95243 580 aa18.65■□□□□ 0.58
ECHDC2-223ENST00000542552 JAG1P78504 1218 aa18.65■□□□□ 0.58
ECHDC2-223ENST00000542552 PRRT2Q7Z6L0 340 aaPredicted RBP18.65■□□□□ 0.58
ECHDC2-223ENST00000542552 ANKRD23Q86SG2 305 aa18.65■□□□□ 0.58
ECHDC2-223ENST00000542552 TTC6Q86TZ1 520 aa18.65■□□□□ 0.58
ECHDC2-223ENST00000542552 CRACR2BQ8N4Y2 399 aaPredicted RBP18.65■□□□□ 0.58
ECHDC2-223ENST00000542552 MCOLN1Q9GZU1 580 aa18.65■□□□□ 0.58
ECHDC2-223ENST00000542552 DCP1AQ9NPI6 582 aaPredicted RBP18.65■□□□□ 0.58
ECHDC2-223ENST00000542552 HTTP42858 3142 aa18.64■□□□□ 0.57
ECHDC2-223ENST00000542552 PLCD1P51178 756 aa18.64■□□□□ 0.57
ECHDC2-223ENST00000542552 DGKZQ13574 1117 aa18.64■□□□□ 0.57
ECHDC2-223ENST00000542552 TAF1CQ15572 869 aaPredicted RBP18.64■□□□□ 0.57
ECHDC2-223ENST00000542552 SLC4A8Q2Y0W8 1093 aa18.64■□□□□ 0.57
ECHDC2-223ENST00000542552 GPAT2Q6NUI2 795 aa18.64■□□□□ 0.57
ECHDC2-223ENST00000542552 TATDN1Q6P1N9 297 aa18.64■□□□□ 0.57
ECHDC2-223ENST00000542552 CTU1Q7Z7A3 348 aaKnown RBP18.64■□□□□ 0.57
ECHDC2-223ENST00000542552 CCDC84Q86UT8 332 aaPredicted RBP18.64■□□□□ 0.57
ECHDC2-223ENST00000542552 SDR42E1Q8WUS8 393 aa18.64■□□□□ 0.57
ECHDC2-223ENST00000542552 TBC1D2Q9BYX2 928 aa18.64■□□□□ 0.57
ECHDC2-223ENST00000542552 PUS7LQ9H0K6 701 aaKnown RBP18.64■□□□□ 0.57
ECHDC2-223ENST00000542552 ATP8A2Q9NTI2 1148 aa18.64■□□□□ 0.57
ECHDC2-223ENST00000542552 GINM1Q9NU53 330 aa18.64■□□□□ 0.57
ECHDC2-223ENST00000542552 ZBTB47Q9UFB7 747 aaPredicted RBP18.64■□□□□ 0.57
ECHDC2-223ENST00000542552 SERPINB13Q9UIV8 391 aa18.64■□□□□ 0.57
ECHDC2-223ENST00000542552 RNF113AO15541 343 aaKnown RBP18.63■□□□□ 0.57
ECHDC2-223ENST00000542552 PRKAB2O43741 272 aa18.63■□□□□ 0.57
ECHDC2-223ENST00000542552 ZFYP08048 801 aaPredicted RBP18.63■□□□□ 0.57
ECHDC2-223ENST00000542552 GABPAQ06546 454 aa18.63■□□□□ 0.57
ECHDC2-223ENST00000542552 ABHD8Q96I13 439 aa18.63■□□□□ 0.57
ECHDC2-223ENST00000542552 TRIM34Q9BYJ4 488 aa18.63■□□□□ 0.57
ECHDC2-223ENST00000542552 ZFYVE28Q9HCC9 887 aa18.63■□□□□ 0.57
ECHDC2-223ENST00000542552 USP17L5A8MUK1 530 aa18.62■□□□□ 0.57
ECHDC2-223ENST00000542552 ASNSP08243 561 aa18.62■□□□□ 0.57
ECHDC2-223ENST00000542552 PDE1AP54750 535 aa18.62■□□□□ 0.57
ECHDC2-223ENST00000542552 NUCB1Q02818 461 aa18.62■□□□□ 0.57
ECHDC2-223ENST00000542552 SHROOM1Q2M3G4 852 aaPredicted RBP18.62■□□□□ 0.57
ECHDC2-223ENST00000542552 FASTKD5Q7L8L6 764 aaKnown RBP18.62■□□□□ 0.57
ECHDC2-223ENST00000542552 ZNF280CQ8ND82 737 aa18.62■□□□□ 0.57
ECHDC2-223ENST00000542552 OSBP2Q969R2 916 aa18.62■□□□□ 0.57
ECHDC2-223ENST00000542552 STRBPQ96SI9 672 aaKnown RBP18.62■□□□□ 0.57
ECHDC2-223ENST00000542552 WDR18Q9BV38 432 aa18.62■□□□□ 0.57
ECHDC2-223ENST00000542552 MCM9Q9NXL9 1143 aa18.62■□□□□ 0.57
ECHDC2-223ENST00000542552 BAZ2AQ9UIF9 1905 aaKnown RBP18.62■□□□□ 0.57
ECHDC2-223ENST00000542552 LOC285556D6RIA3 1793 aa18.61■□□□□ 0.57
ECHDC2-223ENST00000542552 TRIM75PA6NK02 468 aa18.61■□□□□ 0.57
ECHDC2-223ENST00000542552 PDHXO00330 501 aa18.61■□□□□ 0.57
ECHDC2-223ENST00000542552 TLR2O60603 784 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms