RNA–Protein interactions for RNA: ENST00000542279.5

GTF2H3-209, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-209ENST00000542279 HNRNPUQ00839 825 aaKnown RBP eCLIP5.7□□□□□ -1.5
GTF2H3-209ENST00000542279 TMEM67Q5HYA8 995 aa5.7□□□□□ -1.5
GTF2H3-209ENST00000542279 WFDC3Q8IUB2 231 aa5.7□□□□□ -1.5
GTF2H3-209ENST00000542279 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.7□□□□□ -1.5
GTF2H3-209ENST00000542279 SCAMP3O14828 347 aaKnown RBP5.69□□□□□ -1.5
GTF2H3-209ENST00000542279 DYNC1LI2O43237 492 aaPredicted RBP5.69□□□□□ -1.5
GTF2H3-209ENST00000542279 GADD45BO75293 160 aaPredicted RBP5.69□□□□□ -1.5
GTF2H3-209ENST00000542279 PDE3AQ14432 1141 aa5.69□□□□□ -1.5
GTF2H3-209ENST00000542279 FBXO15Q8NCQ5 510 aaPredicted RBP5.69□□□□□ -1.5
GTF2H3-209ENST00000542279 ASB11Q8WXH4 323 aa5.69□□□□□ -1.5
GTF2H3-209ENST00000542279 RELTQ969Z4 430 aa5.69□□□□□ -1.5
GTF2H3-209ENST00000542279 CRELD1Q96HD1 420 aa5.69□□□□□ -1.5
GTF2H3-209ENST00000542279 KRTAP17-1Q9BYP8 105 aa5.69□□□□□ -1.5
GTF2H3-209ENST00000542279 SNX11Q9Y5W9 270 aa5.69□□□□□ -1.5
GTF2H3-209ENST00000542279 NPIPB6E9PJ23 425 aa5.68□□□□□ -1.5
GTF2H3-209ENST00000542279 GLI1P08151 1106 aa5.68□□□□□ -1.5
GTF2H3-209ENST00000542279 SLFN14P0C7P3 912 aa5.68□□□□□ -1.5
GTF2H3-209ENST00000542279 HDLBPQ00341 1268 aaKnown RBP5.68□□□□□ -1.5
GTF2H3-209ENST00000542279 ZP2Q05996 745 aa5.68□□□□□ -1.5
GTF2H3-209ENST00000542279 C9orf131Q5VYM1 1079 aa5.68□□□□□ -1.5
GTF2H3-209ENST00000542279 PRR23BQ6ZRT6 265 aa5.68□□□□□ -1.5
GTF2H3-209ENST00000542279 GALNT12Q8IXK2 581 aa5.68□□□□□ -1.5
GTF2H3-209ENST00000542279 FRMD6Q96NE9 622 aa5.68□□□□□ -1.5
GTF2H3-209ENST00000542279 BHLHE41Q9C0J9 482 aaPredicted RBP5.68□□□□□ -1.5
GTF2H3-209ENST00000542279 C12orf49Q9H741 205 aa5.68□□□□□ -1.5
GTF2H3-209ENST00000542279 LATS2Q9NRM7 1088 aa5.68□□□□□ -1.5
GTF2H3-209ENST00000542279 AK5Q9Y6K8 562 aa5.68□□□□□ -1.5
GTF2H3-209ENST00000542279 CEACAM5P06731 702 aa5.67□□□□□ -1.5
GTF2H3-209ENST00000542279 USP17L7P0C7H9 530 aa5.67□□□□□ -1.5
GTF2H3-209ENST00000542279 ERCC5P28715 1186 aaPredicted RBP5.67□□□□□ -1.5
GTF2H3-209ENST00000542279 PCDH1Q08174 1060 aa5.67□□□□□ -1.5
GTF2H3-209ENST00000542279 CDK5R2Q13319 367 aa5.67□□□□□ -1.5
GTF2H3-209ENST00000542279 IKZF1Q13422 519 aa5.67□□□□□ -1.5
GTF2H3-209ENST00000542279 LDLRAD1Q5T700 205 aa5.67□□□□□ -1.5
GTF2H3-209ENST00000542279 BCO2Q9BYV7 579 aa5.67□□□□□ -1.5
GTF2H3-209ENST00000542279 OSBPL7Q9BZF2 842 aa5.67□□□□□ -1.5
GTF2H3-209ENST00000542279 CLEC4MQ9H2X3 399 aaPredicted RBP5.67□□□□□ -1.5
GTF2H3-209ENST00000542279 GSX1Q9H4S2 264 aaPredicted RBP5.67□□□□□ -1.5
GTF2H3-209ENST00000542279 CRIM1Q9NZV1 1036 aa5.67□□□□□ -1.5
GTF2H3-209ENST00000542279 TCAF2A6NFQ2 919 aa5.66□□□□□ -1.5
GTF2H3-209ENST00000542279 RNGTTO60942 597 aaKnown RBP5.66□□□□□ -1.5
GTF2H3-209ENST00000542279 AOC2O75106 756 aa5.66□□□□□ -1.5
GTF2H3-209ENST00000542279 CTSHP09668 335 aa5.66□□□□□ -1.5
GTF2H3-209ENST00000542279 ZNF76P36508 570 aa5.66□□□□□ -1.5
GTF2H3-209ENST00000542279 FANCCQ00597 558 aa5.66□□□□□ -1.5
GTF2H3-209ENST00000542279 KRTAP5-3Q6L8H2 238 aa5.66□□□□□ -1.5
GTF2H3-209ENST00000542279 NXPE4Q6UWF7 544 aa5.66□□□□□ -1.5
GTF2H3-209ENST00000542279 KIRREL1Q96J84 757 aa5.66□□□□□ -1.5
GTF2H3-209ENST00000542279 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
GTF2H3-209ENST00000542279 SSU72Q9NP77 194 aaKnown RBP5.66□□□□□ -1.5
GTF2H3-209ENST00000542279 PRDM7Q9NQW5 492 aa5.66□□□□□ -1.5
GTF2H3-209ENST00000542279 FAM8A1Q9UBU6 413 aa5.66□□□□□ -1.5
GTF2H3-209ENST00000542279 JAG2Q9Y219 1238 aa5.66□□□□□ -1.5
GTF2H3-209ENST00000542279 A0A096LPE4 126 aa5.65□□□□□ -1.5
GTF2H3-209ENST00000542279 A0A1W2PPZ6 126 aa5.65□□□□□ -1.5
GTF2H3-209ENST00000542279 GRM2Q14416 872 aa5.65□□□□□ -1.5
GTF2H3-209ENST00000542279 KCNA10Q16322 511 aa5.65□□□□□ -1.5
GTF2H3-209ENST00000542279 MEI1Q5TIA1 1274 aa5.65□□□□□ -1.5
GTF2H3-209ENST00000542279 CYFIP1Q7L576 1253 aa5.65□□□□□ -1.5
GTF2H3-209ENST00000542279 NT5DC4Q86YG4 428 aa5.65□□□□□ -1.5
GTF2H3-209ENST00000542279 RNF34Q969K3 372 aa5.65□□□□□ -1.5
GTF2H3-209ENST00000542279 DIRC2Q96SL1 478 aa5.65□□□□□ -1.5
GTF2H3-209ENST00000542279 EHD4Q9H223 541 aa5.65□□□□□ -1.5
GTF2H3-209ENST00000542279 ATXN3LQ9H3M9 355 aa5.65□□□□□ -1.5
GTF2H3-209ENST00000542279 METTL5Q9NRN9 209 aaKnown RBP5.65□□□□□ -1.5
GTF2H3-209ENST00000542279 A0A1W2PP55 124 aa5.64□□□□□ -1.51
GTF2H3-209ENST00000542279 GIPC1O14908 333 aa5.64□□□□□ -1.51
GTF2H3-209ENST00000542279 ITIH2P19823 946 aa5.64□□□□□ -1.51
GTF2H3-209ENST00000542279 PEAR1Q5VY43 1037 aaPredicted RBP5.64□□□□□ -1.51
GTF2H3-209ENST00000542279 SMYD4Q8IYR2 804 aaPredicted RBP5.64□□□□□ -1.51
GTF2H3-209ENST00000542279 SRCIN1Q9C0H9 1055 aa5.64□□□□□ -1.51
GTF2H3-209ENST00000542279 USP35Q9P2H5 1018 aa5.64□□□□□ -1.51
GTF2H3-209ENST00000542279 CTNND2Q9UQB3 1225 aa5.64□□□□□ -1.51
GTF2H3-209ENST00000542279 SYNGAP1Q96PV0 1343 aa5.64□□□□□ -1.51
GTF2H3-209ENST00000542279 NUAK1O60285 661 aa5.63□□□□□ -1.51
GTF2H3-209ENST00000542279 IGSF3O75054 1194 aa5.63□□□□□ -1.51
GTF2H3-209ENST00000542279 OXCT1P55809 520 aa5.63□□□□□ -1.51
GTF2H3-209ENST00000542279 ZC3H6P61129 1189 aaKnown RBP5.63□□□□□ -1.51
GTF2H3-209ENST00000542279 ZNF423Q2M1K9 1284 aa5.63□□□□□ -1.51
GTF2H3-209ENST00000542279 ATG14Q6ZNE5 492 aa5.63□□□□□ -1.51
GTF2H3-209ENST00000542279 METTL16Q86W50 562 aaKnown RBP5.63□□□□□ -1.51
GTF2H3-209ENST00000542279 KCNN1Q92952 543 aa5.63□□□□□ -1.51
GTF2H3-209ENST00000542279 NRSN2Q9GZP1 204 aa5.63□□□□□ -1.51
GTF2H3-209ENST00000542279 NSUN3Q9H649 340 aaKnown RBP5.63□□□□□ -1.51
GTF2H3-209ENST00000542279 PCOLCE2Q9UKZ9 415 aa5.63□□□□□ -1.51
GTF2H3-209ENST00000542279 TTF2Q9UNY4 1162 aaKnown RBP5.63□□□□□ -1.51
GTF2H3-209ENST00000542279 TRAK1Q9UPV9 953 aa5.63□□□□□ -1.51
GTF2H3-209ENST00000542279 GSTT1P30711 240 aa5.62□□□□□ -1.51
GTF2H3-209ENST00000542279 FCGRTP55899 365 aa5.62□□□□□ -1.51
GTF2H3-209ENST00000542279 RAD51AP2Q09MP3 1159 aa5.62□□□□□ -1.51
GTF2H3-209ENST00000542279 KIAA0319Q5VV43 1072 aa5.62□□□□□ -1.51
GTF2H3-209ENST00000542279 FYB2Q5VWT5 728 aa5.62□□□□□ -1.51
GTF2H3-209ENST00000542279 CCSER2Q9H7U1 834 aa5.62□□□□□ -1.51
GTF2H3-209ENST00000542279 LIN7BQ9HAP6 207 aa5.62□□□□□ -1.51
GTF2H3-209ENST00000542279 DCP1AQ9NPI6 582 aaPredicted RBP5.62□□□□□ -1.51
GTF2H3-209ENST00000542279 GTF2IRD1Q9UHL9 959 aa5.62□□□□□ -1.51
GTF2H3-209ENST00000542279 PPP1R9AQ9ULJ8 1098 aa5.62□□□□□ -1.51
GTF2H3-209ENST00000542279 PCDHGB7Q9Y5F8 929 aa5.62□□□□□ -1.51
GTF2H3-209ENST00000542279 METTL12A8MUP2 240 aa5.61□□□□□ -1.51
GTF2H3-209ENST00000542279 CTSBP07858 339 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms