RNA–Protein interactions for RNA: ENST00000542279.5

GTF2H3-209, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-209ENST00000542279 AEBP2Q6ZN18 517 aaPredicted RBP22.83■■□□□ 1.25
GTF2H3-209ENST00000542279 CHIC1Q5VXU3 224 aa21.59■■□□□ 1.05
GTF2H3-209ENST00000542279 SENP3Q9H4L4 574 aaPredicted RBP19.74■□□□□ 0.75
GTF2H3-209ENST00000542279 PHF23Q9BUL5 403 aaPredicted RBP19.4■□□□□ 0.7
GTF2H3-209ENST00000542279 FOXD1Q16676 465 aa18.33■□□□□ 0.52
GTF2H3-209ENST00000542279 POTEDQ86YR6 584 aa17.57■□□□□ 0.4
GTF2H3-209ENST00000542279 MSH5O43196 834 aa17.45■□□□□ 0.38
GTF2H3-209ENST00000542279 PIAS4Q8N2W9 510 aaPredicted RBP17.14■□□□□ 0.33
GTF2H3-209ENST00000542279 PLPPR3Q6T4P5 718 aa17.04■□□□□ 0.32
GTF2H3-209ENST00000542279 PPP6R1Q9UPN7 881 aa16.8■□□□□ 0.28
GTF2H3-209ENST00000542279 ADRA2BP18089 450 aa16.79■□□□□ 0.28
GTF2H3-209ENST00000542279 SCAF1Q9H7N4 1312 aaKnown RBP15.6■□□□□ 0.09
GTF2H3-209ENST00000542279 MAPK8IP2Q13387 824 aaPredicted RBP15.52■□□□□ 0.08
GTF2H3-209ENST00000542279 DMRT2Q9Y5R5 561 aa15.52■□□□□ 0.08
GTF2H3-209ENST00000542279 CACNB1Q02641 598 aaPredicted RBP15.26■□□□□ 0.03
GTF2H3-209ENST00000542279 DCAF8L1A6NGE4 600 aa15.1■□□□□ 0.01
GTF2H3-209ENST00000542279 PPP4R3CPQ6ZMV5 832 aa14.85□□□□□ -0.03
GTF2H3-209ENST00000542279 HOXD11P31277 338 aaPredicted RBP14.78□□□□□ -0.04
GTF2H3-209ENST00000542279 RNF39Q9H2S5 420 aa14.74□□□□□ -0.05
GTF2H3-209ENST00000542279 CNKSR2Q8WXI2 1034 aa14.69□□□□□ -0.06
GTF2H3-209ENST00000542279 RNF216Q9NWF9 866 aaPredicted RBP14.62□□□□□ -0.07
GTF2H3-209ENST00000542279 C1QBPQ07021 282 aaKnown RBP14.61□□□□□ -0.07
GTF2H3-209ENST00000542279 DNAJC5BQ9UF47 199 aa14.39□□□□□ -0.11
GTF2H3-209ENST00000542279 NCBP3Q53F19 620 aaKnown RBP14.31□□□□□ -0.12
GTF2H3-209ENST00000542279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.26□□□□□ -0.13
GTF2H3-209ENST00000542279 NPM3O75607 178 aaKnown RBP13.89□□□□□ -0.19
GTF2H3-209ENST00000542279 CAPN15O75808 1086 aa13.81□□□□□ -0.2
GTF2H3-209ENST00000542279 POTEHQ6S545 545 aa13.75□□□□□ -0.21
GTF2H3-209ENST00000542279 U3KPZ7 1027 aaPredicted RBP13.71□□□□□ -0.21
GTF2H3-209ENST00000542279 DSG3P32926 999 aa13.69□□□□□ -0.22
GTF2H3-209ENST00000542279 SPINK5Q9NQ38 1064 aaPredicted RBP13.66□□□□□ -0.22
GTF2H3-209ENST00000542279 APLP2Q06481 763 aa13.58□□□□□ -0.24
GTF2H3-209ENST00000542279 TRHP20396 242 aaPredicted RBP13.49□□□□□ -0.25
GTF2H3-209ENST00000542279 ZNF219Q9P2Y4 722 aaPredicted RBP13.44□□□□□ -0.26
GTF2H3-209ENST00000542279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.43□□□□□ -0.26
GTF2H3-209ENST00000542279 HNRNPUL2Q1KMD3 747 aaKnown RBP13.43□□□□□ -0.26
GTF2H3-209ENST00000542279 ABCB7O75027 752 aa13.37□□□□□ -0.27
GTF2H3-209ENST00000542279 SLC4A2P04920 1241 aa13.31□□□□□ -0.28
GTF2H3-209ENST00000542279 SAMD1Q6SPF0 538 aaPredicted RBP13.29□□□□□ -0.28
GTF2H3-209ENST00000542279 KCNA4P22459 653 aa13.26□□□□□ -0.29
GTF2H3-209ENST00000542279 RBM42Q9BTD8 480 aaKnown RBP13.22□□□□□ -0.29
GTF2H3-209ENST00000542279 POLA2Q14181 598 aa13□□□□□ -0.33
GTF2H3-209ENST00000542279 CHRDL2Q6WN34 429 aa13□□□□□ -0.33
GTF2H3-209ENST00000542279 MYCNP04198 464 aaPredicted RBP12.94□□□□□ -0.34
GTF2H3-209ENST00000542279 ZBTB12Q9Y330 459 aaPredicted RBP12.79□□□□□ -0.36
GTF2H3-209ENST00000542279 AKT1S1Q96B36 256 aa12.78□□□□□ -0.36
GTF2H3-209ENST00000542279 SP7Q8TDD2 431 aaPredicted RBP12.71□□□□□ -0.37
GTF2H3-209ENST00000542279 REM2Q8IYK8 340 aaPredicted RBP12.61□□□□□ -0.39
GTF2H3-209ENST00000542279 HAX1O00165 279 aa12.59□□□□□ -0.39
GTF2H3-209ENST00000542279 FOXD4L1Q9NU39 408 aa12.58□□□□□ -0.4
GTF2H3-209ENST00000542279 PIP4P2Q8N4L2 257 aa12.56□□□□□ -0.4
GTF2H3-209ENST00000542279 SLC4A1APQ9BWU0 796 aaKnown RBP12.55□□□□□ -0.4
GTF2H3-209ENST00000542279 ATF5Q9Y2D1 282 aaPredicted RBP12.53□□□□□ -0.4
GTF2H3-209ENST00000542279 OSCARQ8IYS5 282 aa12.52□□□□□ -0.41
GTF2H3-209ENST00000542279 PITPNM1O00562 1244 aa12.44□□□□□ -0.42
GTF2H3-209ENST00000542279 FXR2P51116 673 aaKnown RBP eCLIP12.42□□□□□ -0.42
GTF2H3-209ENST00000542279 FBLN2P98095 1184 aa12.33□□□□□ -0.44
GTF2H3-209ENST00000542279 SPDYE2BA6NHP3 402 aa12.29□□□□□ -0.44
GTF2H3-209ENST00000542279 SPDYE6P0CI01 402 aa12.29□□□□□ -0.44
GTF2H3-209ENST00000542279 SPDYE2Q495Y8 402 aa12.29□□□□□ -0.44
GTF2H3-209ENST00000542279 ATXN8OSP0DMR3 200 aa12.27□□□□□ -0.45
GTF2H3-209ENST00000542279 CLEC11AQ9Y240 323 aa12.25□□□□□ -0.45
GTF2H3-209ENST00000542279 SPDYE1Q8NFV5 336 aaPredicted RBP12.22□□□□□ -0.45
GTF2H3-209ENST00000542279 PRKAR2AP13861 404 aaKnown RBP12.2□□□□□ -0.46
GTF2H3-209ENST00000542279 EVX2Q03828 476 aa12.17□□□□□ -0.46
GTF2H3-209ENST00000542279 ZNF692Q9BU19 519 aaPredicted RBP12.14□□□□□ -0.47
GTF2H3-209ENST00000542279 ZBTB22O15209 634 aa12.08□□□□□ -0.48
GTF2H3-209ENST00000542279 C19orf67A6NJJ6 358 aa12.03□□□□□ -0.48
GTF2H3-209ENST00000542279 PRR29P0C7W0 189 aa12□□□□□ -0.49
GTF2H3-209ENST00000542279 GABBR2O75899 941 aa11.99□□□□□ -0.49
GTF2H3-209ENST00000542279 SSUH2Q9Y2M2 353 aa11.97□□□□□ -0.49
GTF2H3-209ENST00000542279 LHX8Q68G74 356 aa11.96□□□□□ -0.49
GTF2H3-209ENST00000542279 CHADLQ6NUI6 762 aa11.93□□□□□ -0.5
GTF2H3-209ENST00000542279 MKRN4PQ13434 485 aaPredicted RBP11.92□□□□□ -0.5
GTF2H3-209ENST00000542279 PABPN1Q86U42 306 aaKnown RBP eCLIP11.88□□□□□ -0.51
GTF2H3-209ENST00000542279 CLCN6P51797 869 aa11.82□□□□□ -0.52
GTF2H3-209ENST00000542279 CD44P16070 742 aaKnown RBP11.79□□□□□ -0.52
GTF2H3-209ENST00000542279 FARP1Q9Y4F1 1045 aaPredicted RBP11.75□□□□□ -0.53
GTF2H3-209ENST00000542279 DCBLD2Q96PD2 775 aa11.73□□□□□ -0.53
GTF2H3-209ENST00000542279 POTEIP0CG38 1075 aa11.61□□□□□ -0.55
GTF2H3-209ENST00000542279 ZRANB1Q9UGI0 708 aa11.6□□□□□ -0.55
GTF2H3-209ENST00000542279 STAG3Q9UJ98 1225 aa11.6□□□□□ -0.55
GTF2H3-209ENST00000542279 PLSCR2Q9NRY7 297 aa11.59□□□□□ -0.55
GTF2H3-209ENST00000542279 PAK3O75914 559 aaPredicted RBP11.54□□□□□ -0.56
GTF2H3-209ENST00000542279 ZNF579Q8NAF0 562 aaKnown RBP11.53□□□□□ -0.56
GTF2H3-209ENST00000542279 CREBZFQ9NS37 354 aa11.43□□□□□ -0.58
GTF2H3-209ENST00000542279 NPM1P06748 294 aaKnown RBP eCLIP11.42□□□□□ -0.58
GTF2H3-209ENST00000542279 GALR2O43603 387 aaPredicted RBP11.39□□□□□ -0.59
GTF2H3-209ENST00000542279 SPDYE4A6NLX3 237 aa11.33□□□□□ -0.6
GTF2H3-209ENST00000542279 OTUD5Q96G74 571 aa11.32□□□□□ -0.6
GTF2H3-209ENST00000542279 PHF12Q96QT6 1004 aa11.29□□□□□ -0.6
GTF2H3-209ENST00000542279 POTEMA6NI47 508 aa11.26□□□□□ -0.61
GTF2H3-209ENST00000542279 CSRNP3Q8WYN3 585 aa11.26□□□□□ -0.61
GTF2H3-209ENST00000542279 MAMSTRQ6ZN01 415 aa11.23□□□□□ -0.61
GTF2H3-209ENST00000542279 POTEB2H3BUK9 544 aa11.22□□□□□ -0.61
GTF2H3-209ENST00000542279 C7P10643 843 aa11.22□□□□□ -0.61
GTF2H3-209ENST00000542279 POTEGQ6S5H5 508 aa11.22□□□□□ -0.61
GTF2H3-209ENST00000542279 SLC39A7Q92504 469 aa11.21□□□□□ -0.61
GTF2H3-209ENST00000542279 PCDH10Q9P2E7 1040 aa11.21□□□□□ -0.61
GTF2H3-209ENST00000542279 METRNQ9UJH8 293 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms