RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 CBX8Q9HC52 389 aa12.55□□□□□ -0.4
NECAP1-206ENST00000542095 ATP8A2Q9NTI2 1148 aa12.55□□□□□ -0.4
NECAP1-206ENST00000542095 AATFQ9NY61 560 aaKnown RBP eCLIP12.55□□□□□ -0.4
NECAP1-206ENST00000542095 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.55□□□□□ -0.4
NECAP1-206ENST00000542095 U2AF2P26368 475 aaKnown RBP eCLIP12.55□□□□□ -0.44e-6■■■■□ 20.9
NECAP1-206ENST00000542095 ST5P78524 1137 aa12.55□□□□□ -0.4
NECAP1-206ENST00000542095 PRR5LQ6MZQ0 368 aa12.55□□□□□ -0.4
NECAP1-206ENST00000542095 IQCA1Q86XH1 822 aa12.55□□□□□ -0.4
NECAP1-206ENST00000542095 FMR1NBQ8N0W7 255 aaPredicted RBP12.55□□□□□ -0.4
NECAP1-206ENST00000542095 WDR66Q8TBY9 1149 aa12.55□□□□□ -0.4
NECAP1-206ENST00000542095 NUP133Q8WUM0 1156 aa12.55□□□□□ -0.4
NECAP1-206ENST00000542095 ZSCAN10Q96SZ4 725 aaPredicted RBP12.55□□□□□ -0.4
NECAP1-206ENST00000542095 USP17L12C9JPN9 530 aa12.54□□□□□ -0.4
NECAP1-206ENST00000542095 USP17L21D6R901 530 aa12.54□□□□□ -0.4
NECAP1-206ENST00000542095 ZNF500O60304 480 aaPredicted RBP12.54□□□□□ -0.4
NECAP1-206ENST00000542095 DEXIO95424 95 aa12.54□□□□□ -0.4
NECAP1-206ENST00000542095 SLC3A2P08195 630 aaKnown RBP12.54□□□□□ -0.4
NECAP1-206ENST00000542095 SLC39A14Q15043 492 aa12.54□□□□□ -0.4
NECAP1-206ENST00000542095 SAFBQ15424 915 aaKnown RBP eCLIP12.54□□□□□ -0.4
NECAP1-206ENST00000542095 STX1AQ16623 288 aa12.54□□□□□ -0.4
NECAP1-206ENST00000542095 LUZP1Q86V48 1076 aa12.54□□□□□ -0.4
NECAP1-206ENST00000542095 QTRT2Q9H974 415 aaKnown RBP12.54□□□□□ -0.4
NECAP1-206ENST00000542095 CYP2D7A0A087X1C5 515 aa12.54□□□□□ -0.4
NECAP1-206ENST00000542095 GYS1P13807 737 aa12.54□□□□□ -0.4
NECAP1-206ENST00000542095 ZNF165P49910 485 aa12.54□□□□□ -0.4
NECAP1-206ENST00000542095 ZNF804AQ7Z570 1209 aa12.54□□□□□ -0.4
NECAP1-206ENST00000542095 NBPF11Q86T75 865 aa12.54□□□□□ -0.4
NECAP1-206ENST00000542095 CRACR2BQ8N4Y2 399 aaPredicted RBP12.54□□□□□ -0.4
NECAP1-206ENST00000542095 JMYQ8N9B5 988 aa12.54□□□□□ -0.4
NECAP1-206ENST00000542095 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.54□□□□□ -0.4
NECAP1-206ENST00000542095 DNAJC25Q9H1X3 360 aa12.54□□□□□ -0.4
NECAP1-206ENST00000542095 DCP1AQ9NPI6 582 aaPredicted RBP12.54□□□□□ -0.4
NECAP1-206ENST00000542095 ARPP21Q9UBL0 812 aaPredicted RBP12.54□□□□□ -0.4
NECAP1-206ENST00000542095 TAOK2Q9UL54 1235 aa12.54□□□□□ -0.4
NECAP1-206ENST00000542095 A0A1B0GVL5 298 aa12.53□□□□□ -0.4
NECAP1-206ENST00000542095 PPP6R2O75170 966 aa12.53□□□□□ -0.4
NECAP1-206ENST00000542095 IFIT1BQ5T764 474 aaKnown RBP12.53□□□□□ -0.4
NECAP1-206ENST00000542095 C15orf52Q6ZUT6 534 aaKnown RBP12.53□□□□□ -0.4
NECAP1-206ENST00000542095 CATIPQ7Z7H3 387 aa12.53□□□□□ -0.4
NECAP1-206ENST00000542095 ENAHQ8N8S7 591 aaPredicted RBP12.53□□□□□ -0.4
NECAP1-206ENST00000542095 TDRD7Q8NHU6 1098 aaKnown RBP12.53□□□□□ -0.4
NECAP1-206ENST00000542095 NAV1Q8NEY1 1877 aa12.53□□□□□ -0.4
NECAP1-206ENST00000542095 SMIM22K7EJ46 135 aa12.52□□□□□ -0.4
NECAP1-206ENST00000542095 AP5Z1O43299 807 aa12.52□□□□□ -0.4
NECAP1-206ENST00000542095 ORC4O43929 436 aa12.52□□□□□ -0.4
NECAP1-206ENST00000542095 MMP1P03956 469 aa12.52□□□□□ -0.4
NECAP1-206ENST00000542095 SERPINB2P05120 415 aa12.52□□□□□ -0.4
NECAP1-206ENST00000542095 LDHBP07195 334 aaKnown RBP12.52□□□□□ -0.4
NECAP1-206ENST00000542095 CALM1P0DP23 149 aa12.52□□□□□ -0.4
NECAP1-206ENST00000542095 CALM2P0DP24 149 aa12.52□□□□□ -0.4
NECAP1-206ENST00000542095 CALM3P0DP25 149 aa12.52□□□□□ -0.4
NECAP1-206ENST00000542095 CMA1P23946 247 aa12.52□□□□□ -0.4
NECAP1-206ENST00000542095 NDUFA8P51970 172 aa12.52□□□□□ -0.4
NECAP1-206ENST00000542095 SBK1Q52WX2 424 aa12.52□□□□□ -0.4
NECAP1-206ENST00000542095 RBM17Q96I25 401 aaKnown RBP12.52□□□□□ -0.4
NECAP1-206ENST00000542095 HMGB2P26583 209 aaKnown RBP12.52□□□□□ -0.41
NECAP1-206ENST00000542095 GUCY1A2P33402 732 aa12.52□□□□□ -0.41
NECAP1-206ENST00000542095 GSTO1P78417 241 aa12.52□□□□□ -0.41
NECAP1-206ENST00000542095 AKAP17AQ02040 695 aaKnown RBP12.52□□□□□ -0.41
NECAP1-206ENST00000542095 CRY2Q49AN0 593 aa12.52□□□□□ -0.41
NECAP1-206ENST00000542095 AXDND1Q5T1B0 1012 aaPredicted RBP12.52□□□□□ -0.41
NECAP1-206ENST00000542095 SDF4Q9BRK5 362 aa12.52□□□□□ -0.41
NECAP1-206ENST00000542095 RNF26Q9BY78 433 aaPredicted RBP12.52□□□□□ -0.41
NECAP1-206ENST00000542095 RBM28Q9NW13 759 aaKnown RBP12.52□□□□□ -0.41
NECAP1-206ENST00000542095 ANO10Q9NW15 660 aa12.52□□□□□ -0.41
NECAP1-206ENST00000542095 JAG2Q9Y219 1238 aa12.52□□□□□ -0.41
NECAP1-206ENST00000542095 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.52□□□□□ -0.41
NECAP1-206ENST00000542095 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.52□□□□□ -0.41
NECAP1-206ENST00000542095 CDK5RAP2Q96SN8 1893 aa12.51□□□□□ -0.41
NECAP1-206ENST00000542095 GOLGA6L6A8MZA4 724 aa12.51□□□□□ -0.41
NECAP1-206ENST00000542095 UBE2Q2LH0YL09 131 aa12.51□□□□□ -0.41
NECAP1-206ENST00000542095 PRDM1O75626 825 aa12.51□□□□□ -0.41
NECAP1-206ENST00000542095 KRT27Q7Z3Y8 459 aa12.51□□□□□ -0.41
NECAP1-206ENST00000542095 NOSTRINQ8IVI9 506 aa12.51□□□□□ -0.41
NECAP1-206ENST00000542095 MAP3K14Q99558 947 aa12.51□□□□□ -0.41
NECAP1-206ENST00000542095 FOXP1Q9H334 677 aaPredicted RBP12.51□□□□□ -0.41
NECAP1-206ENST00000542095 DDAH1O94760 285 aa12.51□□□□□ -0.41
NECAP1-206ENST00000542095 TPM3P06753 285 aa12.51□□□□□ -0.41
NECAP1-206ENST00000542095 ATP2B4P23634 1241 aa12.51□□□□□ -0.41
NECAP1-206ENST00000542095 PDE4BQ07343 736 aa12.51□□□□□ -0.41
NECAP1-206ENST00000542095 PTPAQ15257 358 aa12.51□□□□□ -0.41
NECAP1-206ENST00000542095 DIS3L2Q8IYB7 885 aaKnown RBP12.51□□□□□ -0.41
NECAP1-206ENST00000542095 CCDC82Q8N4S0 544 aa12.51□□□□□ -0.41
NECAP1-206ENST00000542095 XBP1P17861 261 aa12.5□□□□□ -0.41
NECAP1-206ENST00000542095 MARCKSP29966 332 aaPredicted RBP12.5□□□□□ -0.41
NECAP1-206ENST00000542095 NT5C2P49902 561 aa12.5□□□□□ -0.41
NECAP1-206ENST00000542095 GPSM2P81274 684 aa12.5□□□□□ -0.41
NECAP1-206ENST00000542095 CMTR1Q8N1G2 835 aaKnown RBP12.5□□□□□ -0.41
NECAP1-206ENST00000542095 NOL10Q9BSC4 688 aaKnown RBP12.5□□□□□ -0.41
NECAP1-206ENST00000542095 BTBD18B2RXH4 712 aa12.5□□□□□ -0.41
NECAP1-206ENST00000542095 GOLGA6L19H0YKK7 550 aa12.5□□□□□ -0.41
NECAP1-206ENST00000542095 WDHD1O75717 1129 aaPredicted RBP12.5□□□□□ -0.41
NECAP1-206ENST00000542095 ZNF202O95125 648 aa12.5□□□□□ -0.41
NECAP1-206ENST00000542095 PFKFB1P16118 471 aa12.5□□□□□ -0.41
NECAP1-206ENST00000542095 KIAA2012Q0VF49 1180 aa12.5□□□□□ -0.41
NECAP1-206ENST00000542095 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.5□□□□□ -0.41
NECAP1-206ENST00000542095 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.5□□□□□ -0.41
NECAP1-206ENST00000542095 MCM9Q9NXL9 1143 aa12.5□□□□□ -0.41
NECAP1-206ENST00000542095 GGA1Q9UJY5 639 aa12.5□□□□□ -0.41
NECAP1-206ENST00000542095 KCNJ14Q9UNX9 436 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms