RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.02□□□□□ -0.64
CNOT4-212ENST00000541284 ZSWIM5Q9P217 1185 aa11.02□□□□□ -0.64
CNOT4-212ENST00000541284 LIFRP42702 1097 aa11.02□□□□□ -0.65
CNOT4-212ENST00000541284 TBX2Q13207 712 aaPredicted RBP11.02□□□□□ -0.65
CNOT4-212ENST00000541284 ELF2Q15723 593 aa11.02□□□□□ -0.65
CNOT4-212ENST00000541284 KIF6Q6ZMV9 814 aa11.02□□□□□ -0.65
CNOT4-212ENST00000541284 REXO1L1PQ8IX06 675 aa11.02□□□□□ -0.65
CNOT4-212ENST00000541284 SEC31BQ9NQW1 1179 aa11.02□□□□□ -0.65
CNOT4-212ENST00000541284 MYH6P13533 1939 aa11.02□□□□□ -0.65
CNOT4-212ENST00000541284 GSG1L2A8MUP6 293 aa11.02□□□□□ -0.65
CNOT4-212ENST00000541284 SNAP23O00161 211 aa11.02□□□□□ -0.65
CNOT4-212ENST00000541284 SMC2O95347 1197 aa11.02□□□□□ -0.65
CNOT4-212ENST00000541284 H2AFXP16104 143 aaPredicted RBP11.02□□□□□ -0.65
CNOT4-212ENST00000541284 SYNE3Q6ZMZ3 975 aa11.02□□□□□ -0.65
CNOT4-212ENST00000541284 ELOA2Q8IYF1 753 aaPredicted RBP11.02□□□□□ -0.65
CNOT4-212ENST00000541284 ZBTB1Q9Y2K1 713 aa11.02□□□□□ -0.65
CNOT4-212ENST00000541284 IRS4O14654 1257 aaPredicted RBP11.01□□□□□ -0.65
CNOT4-212ENST00000541284 FMNL1O95466 1100 aaPredicted RBP11.01□□□□□ -0.65
CNOT4-212ENST00000541284 NT5DC1Q5TFE4 455 aa11.01□□□□□ -0.65
CNOT4-212ENST00000541284 KRBA2Q6ZNG9 492 aa11.01□□□□□ -0.65
CNOT4-212ENST00000541284 MICU3Q86XE3 530 aa11.01□□□□□ -0.65
CNOT4-212ENST00000541284 VSTM4Q8IW00 320 aa11.01□□□□□ -0.65
CNOT4-212ENST00000541284 FBXO2Q9UK22 296 aaPredicted RBP11.01□□□□□ -0.65
CNOT4-212ENST00000541284 SARSP49591 514 aaKnown RBP11.01□□□□□ -0.65
CNOT4-212ENST00000541284 CTDSPL2Q05D32 466 aa11.01□□□□□ -0.65
CNOT4-212ENST00000541284 RASGRF1Q13972 1273 aa11.01□□□□□ -0.65
CNOT4-212ENST00000541284 TTF1Q15361 905 aaPredicted RBP11.01□□□□□ -0.65
CNOT4-212ENST00000541284 PTPN21Q16825 1174 aa11.01□□□□□ -0.65
CNOT4-212ENST00000541284 IFNL3Q8IZI9 196 aa11.01□□□□□ -0.65
CNOT4-212ENST00000541284 ZNF397Q8NF99 534 aaPredicted RBP11.01□□□□□ -0.65
CNOT4-212ENST00000541284 BCL11BQ9C0K0 894 aaPredicted RBP11.01□□□□□ -0.65
CNOT4-212ENST00000541284 ANKRD18BA2A2Z9 1011 aa11.01□□□□□ -0.65
CNOT4-212ENST00000541284 ZBTB43O43298 467 aa11.01□□□□□ -0.65
CNOT4-212ENST00000541284 CUTAO60888 179 aa11.01□□□□□ -0.65
CNOT4-212ENST00000541284 PRR29P0C7W0 189 aa11.01□□□□□ -0.65
CNOT4-212ENST00000541284 ZNF18P17022 549 aa11.01□□□□□ -0.65
CNOT4-212ENST00000541284 GOLGA8FQ08AF8 430 aa11.01□□□□□ -0.65
CNOT4-212ENST00000541284 GOLGA8DPQ0D2H9 430 aa11.01□□□□□ -0.65
CNOT4-212ENST00000541284 TAF7LQ5H9L4 462 aa11.01□□□□□ -0.65
CNOT4-212ENST00000541284 ZNF330Q9Y3S2 320 aaPredicted RBP11.01□□□□□ -0.65
CNOT4-212ENST00000541284 BRCA1P38398 1863 aaKnown RBP11.01□□□□□ -0.65
CNOT4-212ENST00000541284 IDH1O75874 414 aaKnown RBP11□□□□□ -0.65
CNOT4-212ENST00000541284 SLU7O95391 586 aaKnown RBP11□□□□□ -0.65
CNOT4-212ENST00000541284 NTSR2O95665 410 aa11□□□□□ -0.65
CNOT4-212ENST00000541284 IFNAR1P17181 557 aa11□□□□□ -0.65
CNOT4-212ENST00000541284 MYL5Q02045 173 aa11□□□□□ -0.65
CNOT4-212ENST00000541284 ZHX1Q9UKY1 873 aaPredicted RBP11□□□□□ -0.65
CNOT4-212ENST00000541284 PCDHA5Q9Y5H7 936 aa11□□□□□ -0.65
CNOT4-212ENST00000541284 BAZ2AQ9UIF9 1905 aaKnown RBP11□□□□□ -0.65
CNOT4-212ENST00000541284 SPATA31A6Q5VVP1 1343 aa11□□□□□ -0.65
CNOT4-212ENST00000541284 PATL2C9JE40 543 aaKnown RBP11□□□□□ -0.65
CNOT4-212ENST00000541284 PRKAB2O43741 272 aa11□□□□□ -0.65
CNOT4-212ENST00000541284 FMR1Q06787 632 aaKnown RBP eCLIP11□□□□□ -0.65
CNOT4-212ENST00000541284 SYT10Q6XYQ8 523 aa11□□□□□ -0.65
CNOT4-212ENST00000541284 SMIM22K7EJ46 135 aa11□□□□□ -0.65
CNOT4-212ENST00000541284 PDE8AO60658 829 aa11□□□□□ -0.65
CNOT4-212ENST00000541284 MMP1P03956 469 aa11□□□□□ -0.65
CNOT4-212ENST00000541284 SFPQP23246 707 aaKnown RBP eCLIP11□□□□□ -0.65
CNOT4-212ENST00000541284 SPATA20Q8TB22 786 aa11□□□□□ -0.65
CNOT4-212ENST00000541284 STRN4Q9NRL3 753 aa11□□□□□ -0.65
CNOT4-212ENST00000541284 FANCLQ9NW38 375 aa11□□□□□ -0.65
CNOT4-212ENST00000541284 GOLGA8AA7E2F4 631 aa10.99□□□□□ -0.65
CNOT4-212ENST00000541284 KIF2AO00139 706 aaPredicted RBP10.99□□□□□ -0.65
CNOT4-212ENST00000541284 CDKL5O76039 1030 aa10.99□□□□□ -0.65
CNOT4-212ENST00000541284 SLFN14P0C7P3 912 aa10.99□□□□□ -0.65
CNOT4-212ENST00000541284 PUM3Q15397 648 aaKnown RBP10.99□□□□□ -0.65
CNOT4-212ENST00000541284 NOSTRINQ8IVI9 506 aa10.99□□□□□ -0.65
CNOT4-212ENST00000541284 SPATA5Q8NB90 893 aa10.99□□□□□ -0.65
CNOT4-212ENST00000541284 HELBQ8NG08 1087 aaPredicted RBP10.99□□□□□ -0.65
CNOT4-212ENST00000541284 CNNM1Q9NRU3 951 aa10.99□□□□□ -0.65
CNOT4-212ENST00000541284 KCNH3Q9ULD8 1083 aa10.99□□□□□ -0.65
CNOT4-212ENST00000541284 ZNF804BA4D1E1 1349 aa10.99□□□□□ -0.65
CNOT4-212ENST00000541284 BTBD18B2RXH4 712 aa10.99□□□□□ -0.65
CNOT4-212ENST00000541284 MBD4O95243 580 aa10.99□□□□□ -0.65
CNOT4-212ENST00000541284 PTPREP23469 700 aa10.99□□□□□ -0.65
CNOT4-212ENST00000541284 IARSP41252 1262 aaKnown RBP10.99□□□□□ -0.65
CNOT4-212ENST00000541284 TMEM67Q5HYA8 995 aa10.99□□□□□ -0.65
CNOT4-212ENST00000541284 APTXQ7Z2E3 356 aaKnown RBP10.99□□□□□ -0.65
CNOT4-212ENST00000541284 STAG1Q8WVM7 1258 aa10.99□□□□□ -0.65
CNOT4-212ENST00000541284 LPIN2Q92539 896 aa10.99□□□□□ -0.65
CNOT4-212ENST00000541284 ARMT1Q9H993 441 aa10.99□□□□□ -0.65
CNOT4-212ENST00000541284 MAN1B1Q9UKM7 699 aa10.99□□□□□ -0.65
CNOT4-212ENST00000541284 PHLPP2Q6ZVD8 1323 aa10.99□□□□□ -0.65
CNOT4-212ENST00000541284 VWA3AA6NCI4 1184 aa10.98□□□□□ -0.65
CNOT4-212ENST00000541284 TRDNQ13061 729 aa10.98□□□□□ -0.65
CNOT4-212ENST00000541284 SPECC1Q5M775 1068 aa10.98□□□□□ -0.65
CNOT4-212ENST00000541284 LCORLQ8N3X6 602 aa10.98□□□□□ -0.65
CNOT4-212ENST00000541284 PNPLA7Q6ZV29 1317 aa10.98□□□□□ -0.65
CNOT4-212ENST00000541284 ACTN4O43707 911 aaKnown RBP10.98□□□□□ -0.65
CNOT4-212ENST00000541284 STARD3NLO95772 234 aa10.98□□□□□ -0.65
CNOT4-212ENST00000541284 UQCRFS1P1P0C7P4 283 aa10.98□□□□□ -0.65
CNOT4-212ENST00000541284 ADAMTSL1Q8N6G6 1762 aa10.98□□□□□ -0.65
CNOT4-212ENST00000541284 MROH5Q6ZUA9 1318 aa10.98□□□□□ -0.65
CNOT4-212ENST00000541284 ETF1P62495 437 aaKnown RBP10.98□□□□□ -0.65
CNOT4-212ENST00000541284 MORC3Q14149 939 aa10.98□□□□□ -0.65
CNOT4-212ENST00000541284 ERCC6LQ2NKX8 1250 aa10.98□□□□□ -0.65
CNOT4-212ENST00000541284 AKNAD1Q5T1N1 836 aa10.98□□□□□ -0.65
CNOT4-212ENST00000541284 ADGRA1Q86SQ6 560 aa10.98□□□□□ -0.65
CNOT4-212ENST00000541284 MAGEB6Q8N7X4 407 aa10.98□□□□□ -0.65
CNOT4-212ENST00000541284 OXER1Q8TDS5 423 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms