RNA–Protein interactions for RNA: ENST00000541157.5

MRE11-210, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 4

Gene MRE11, Length 594 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-210ENST00000541157 DIXDC1Q155Q3 683 aa11.88□□□□□ -0.51
MRE11-210ENST00000541157 STRIP1Q5VSL9 837 aa11.88□□□□□ -0.51
MRE11-210ENST00000541157 SMYD5Q6GMV2 418 aa11.88□□□□□ -0.51
MRE11-210ENST00000541157 GIMAP6Q6P9H5 292 aa11.88□□□□□ -0.51
MRE11-210ENST00000541157 NEK1Q96PY6 1258 aa11.88□□□□□ -0.51
MRE11-210ENST00000541157 CRNKL1Q9BZJ0 848 aaKnown RBP11.88□□□□□ -0.51
MRE11-210ENST00000541157 NBPF3Q9H094 633 aa11.88□□□□□ -0.51
MRE11-210ENST00000541157 NAPBQ9H115 298 aa11.88□□□□□ -0.51
MRE11-210ENST00000541157 ALDH8A1Q9H2A2 487 aaPredicted RBP11.88□□□□□ -0.51
MRE11-210ENST00000541157 PDRG1Q9NUG6 133 aa11.88□□□□□ -0.51
MRE11-210ENST00000541157 AATFQ9NY61 560 aaKnown RBP eCLIP11.88□□□□□ -0.51
MRE11-210ENST00000541157 GPR75-ASB3A0A0A6YYF3 556 aa11.87□□□□□ -0.51
MRE11-210ENST00000541157 PPP1R3GB7ZBB8 358 aa11.87□□□□□ -0.51
MRE11-210ENST00000541157 ZNF213O14771 459 aa11.87□□□□□ -0.51
MRE11-210ENST00000541157 BAG3O95817 575 aa11.87□□□□□ -0.51
MRE11-210ENST00000541157 COL9A1P20849 921 aa11.87□□□□□ -0.51
MRE11-210ENST00000541157 TDO2P48775 406 aa11.87□□□□□ -0.51
MRE11-210ENST00000541157 AK2P54819 239 aa11.87□□□□□ -0.51
MRE11-210ENST00000541157 HAND2P61296 217 aa11.87□□□□□ -0.51
MRE11-210ENST00000541157 COL9A3Q14050 684 aaPredicted RBP11.87□□□□□ -0.51
MRE11-210ENST00000541157 DACT2Q5SW24 774 aa11.87□□□□□ -0.51
MRE11-210ENST00000541157 NOL10Q9BSC4 688 aaKnown RBP11.87□□□□□ -0.51
MRE11-210ENST00000541157 COL4A5P29400 1685 aa11.87□□□□□ -0.51
MRE11-210ENST00000541157 USP17L3A6NCW0 530 aa11.86□□□□□ -0.51
MRE11-210ENST00000541157 USP17L4A6NCW7 530 aa11.86□□□□□ -0.51
MRE11-210ENST00000541157 USP17L1Q7RTZ2 530 aa11.86□□□□□ -0.51
MRE11-210ENST00000541157 TBC1D10CQ8IV04 446 aa11.86□□□□□ -0.51
MRE11-210ENST00000541157 LARGE2Q8N3Y3 721 aa11.86□□□□□ -0.51
MRE11-210ENST00000541157 SDR42E1Q8WUS8 393 aa11.86□□□□□ -0.51
MRE11-210ENST00000541157 TMX3Q96JJ7 454 aa11.86□□□□□ -0.51
MRE11-210ENST00000541157 MXD3Q9BW11 206 aa11.86□□□□□ -0.51
MRE11-210ENST00000541157 CDHR5Q9HBB8 845 aa11.86□□□□□ -0.51
MRE11-210ENST00000541157 KCNQ5Q9NR82 932 aa11.86□□□□□ -0.51
MRE11-210ENST00000541157 ZNF277Q9NRM2 450 aaPredicted RBP11.86□□□□□ -0.51
MRE11-210ENST00000541157 ATP8A2Q9NTI2 1148 aa11.86□□□□□ -0.51
MRE11-210ENST00000541157 FER1L6Q2WGJ9 1857 aa11.86□□□□□ -0.51
MRE11-210ENST00000541157 SCN9AQ15858 1988 aa11.86□□□□□ -0.51
MRE11-210ENST00000541157 PSME4Q14997 1843 aa11.86□□□□□ -0.51
MRE11-210ENST00000541157 LTBP3Q9NS15 1303 aa11.86□□□□□ -0.51
MRE11-210ENST00000541157 YDJCA8MPS7 323 aa11.85□□□□□ -0.51
MRE11-210ENST00000541157 IARSP41252 1262 aaKnown RBP11.85□□□□□ -0.51
MRE11-210ENST00000541157 BTDP43251 543 aa11.85□□□□□ -0.51
MRE11-210ENST00000541157 ANKRD1Q15327 319 aa11.85□□□□□ -0.51
MRE11-210ENST00000541157 DHX32Q7L7V1 743 aaKnown RBP11.85□□□□□ -0.51
MRE11-210ENST00000541157 NLGN2Q8NFZ4 835 aa11.85□□□□□ -0.51
MRE11-210ENST00000541157 SH3RF3Q8TEJ3 882 aaPredicted RBP11.85□□□□□ -0.51
MRE11-210ENST00000541157 TAOK3Q9H2K8 898 aa11.85□□□□□ -0.51
MRE11-210ENST00000541157 ANAPC4Q9UJX5 808 aa11.85□□□□□ -0.51
MRE11-210ENST00000541157 TTF2Q9UNY4 1162 aaKnown RBP11.85□□□□□ -0.51
MRE11-210ENST00000541157 LIMCH1Q9UPQ0 1083 aa11.85□□□□□ -0.51
MRE11-210ENST00000541157 DAGLAQ9Y4D2 1042 aa11.85□□□□□ -0.51
MRE11-210ENST00000541157 MYH2Q9UKX2 1941 aa11.85□□□□□ -0.51
MRE11-210ENST00000541157 WDR19Q8NEZ3 1342 aa11.85□□□□□ -0.51
MRE11-210ENST00000541157 ARFGEF1Q9Y6D6 1849 aa11.84□□□□□ -0.51
MRE11-210ENST00000541157 NFKBIEO00221 500 aa11.84□□□□□ -0.51
MRE11-210ENST00000541157 HSP90AA1P07900 732 aaKnown RBP11.84□□□□□ -0.51
MRE11-210ENST00000541157 HDLBPQ00341 1268 aaKnown RBP11.84□□□□□ -0.51
MRE11-210ENST00000541157 EXOSC10Q01780 885 aaKnown RBP11.84□□□□□ -0.51
MRE11-210ENST00000541157 PPARAQ07869 468 aa11.84□□□□□ -0.51
MRE11-210ENST00000541157 CUL4AQ13619 759 aa11.84□□□□□ -0.51
MRE11-210ENST00000541157 HHIPL2Q6UWX4 724 aa11.84□□□□□ -0.51
MRE11-210ENST00000541157 NOL8Q76FK4 1167 aaKnown RBP11.84□□□□□ -0.51
MRE11-210ENST00000541157 RALYLQ86SE5 291 aaKnown RBP11.84□□□□□ -0.51
MRE11-210ENST00000541157 NIM1KQ8IY84 436 aa11.84□□□□□ -0.51
MRE11-210ENST00000541157 MB21D2Q8IYB1 491 aaPredicted RBP11.84□□□□□ -0.51
MRE11-210ENST00000541157 NCOA7Q8NI08 942 aa11.84□□□□□ -0.51
MRE11-210ENST00000541157 MRIQ9BWK5 157 aa11.84□□□□□ -0.51
MRE11-210ENST00000541157 DCP1AQ9NPI6 582 aaPredicted RBP11.84□□□□□ -0.51
MRE11-210ENST00000541157 MKRN1Q9UHC7 482 aaKnown RBP11.84□□□□□ -0.51
MRE11-210ENST00000541157 ZNRF3Q9ULT6 936 aa11.84□□□□□ -0.51
MRE11-210ENST00000541157 BCS1LQ9Y276 419 aa11.84□□□□□ -0.51
MRE11-210ENST00000541157 LAMB1P07942 1786 aa11.84□□□□□ -0.51
MRE11-210ENST00000541157 F8W031 263 aaPredicted RBP11.83□□□□□ -0.52
MRE11-210ENST00000541157 DDIT3P35638 169 aa11.83□□□□□ -0.52
MRE11-210ENST00000541157 RHBDL3P58872 404 aa11.83□□□□□ -0.52
MRE11-210ENST00000541157 CTDSPL2Q05D32 466 aa11.83□□□□□ -0.52
MRE11-210ENST00000541157 TRDNQ13061 729 aa11.83□□□□□ -0.52
MRE11-210ENST00000541157 TOB2Q14106 344 aaPredicted RBP11.83□□□□□ -0.52
MRE11-210ENST00000541157 SBK1Q52WX2 424 aa11.83□□□□□ -0.52
MRE11-210ENST00000541157 AKNAD1Q5T1N1 836 aa11.83□□□□□ -0.52
MRE11-210ENST00000541157 RBM26Q5T8P6 1007 aaKnown RBP11.83□□□□□ -0.52
MRE11-210ENST00000541157 CTR9Q6PD62 1173 aa11.83□□□□□ -0.52
MRE11-210ENST00000541157 ADGRD1Q6QNK2 874 aa11.83□□□□□ -0.52
MRE11-210ENST00000541157 FBXL16Q8N461 479 aa11.83□□□□□ -0.52
MRE11-210ENST00000541157 STAG1Q8WVM7 1258 aa11.83□□□□□ -0.52
MRE11-210ENST00000541157 TEKT1Q969V4 418 aa11.83□□□□□ -0.52
MRE11-210ENST00000541157 ZSCAN31Q96LW9 406 aaPredicted RBP11.83□□□□□ -0.52
MRE11-210ENST00000541157 TCEANC2Q96MN5 208 aa11.83□□□□□ -0.52
MRE11-210ENST00000541157 ZBED2Q9BTP6 218 aa11.83□□□□□ -0.52
MRE11-210ENST00000541157 CNNM2Q9H8M5 875 aa11.83□□□□□ -0.52
MRE11-210ENST00000541157 ARPP21Q9UBL0 812 aaPredicted RBP11.83□□□□□ -0.52
MRE11-210ENST00000541157 NEDD4P46934 1319 aa11.83□□□□□ -0.52
MRE11-210ENST00000541157 MYO3BQ8WXR4 1341 aa11.83□□□□□ -0.52
MRE11-210ENST00000541157 DDX60LQ5H9U9 1706 aaKnown RBP11.83□□□□□ -0.52
MRE11-210ENST00000541157 USP17L12C9JPN9 530 aa11.82□□□□□ -0.52
MRE11-210ENST00000541157 USP17L21D6R901 530 aa11.82□□□□□ -0.52
MRE11-210ENST00000541157 MCM5P33992 734 aa11.82□□□□□ -0.52
MRE11-210ENST00000541157 USP5P45974 858 aa11.82□□□□□ -0.52
MRE11-210ENST00000541157 SCNN1DP51172 638 aa11.82□□□□□ -0.52
MRE11-210ENST00000541157 ANTXR2P58335 489 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms