RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 PRKAG2Q9UGJ0 569 aa19.47■□□□□ 0.71
PUDP-206ENST00000540122 LTBP2Q14767 1821 aa19.46■□□□□ 0.71
PUDP-206ENST00000540122 RFX7Q2KHR2 1363 aa19.46■□□□□ 0.71
PUDP-206ENST00000540122 PABPC4Q13310 644 aaKnown RBP eCLIP19.46■□□□□ 0.71
PUDP-206ENST00000540122 TRMT44Q8IYL2 757 aaKnown RBP19.46■□□□□ 0.71
PUDP-206ENST00000540122 LOC285556D6RIA3 1793 aa19.46■□□□□ 0.71
PUDP-206ENST00000540122 DDTLA6NHG4 134 aaPredicted RBP19.45■□□□□ 0.7
PUDP-206ENST00000540122 ATN1P54259 1190 aaPredicted RBP19.45■□□□□ 0.7
PUDP-206ENST00000540122 SPP2Q13103 211 aa19.45■□□□□ 0.7
PUDP-206ENST00000540122 IFIT1P09914 478 aaKnown RBP19.44■□□□□ 0.7
PUDP-206ENST00000540122 FGFR2P21802 821 aa19.44■□□□□ 0.7
PUDP-206ENST00000540122 HOXD11P31277 338 aaPredicted RBP19.44■□□□□ 0.7
PUDP-206ENST00000540122 HMGCS2P54868 508 aa19.44■□□□□ 0.7
PUDP-206ENST00000540122 PUM3Q15397 648 aaKnown RBP19.44■□□□□ 0.7
PUDP-206ENST00000540122 CCL14Q16627 93 aa19.44■□□□□ 0.7
PUDP-206ENST00000540122 LDHBP07195 334 aaKnown RBP19.43■□□□□ 0.7
PUDP-206ENST00000540122 RTP1P59025 263 aa19.43■□□□□ 0.7
PUDP-206ENST00000540122 ZNF280CQ8ND82 737 aa19.43■□□□□ 0.7
PUDP-206ENST00000540122 PEX10O60683 326 aa19.42■□□□□ 0.7
PUDP-206ENST00000540122 PDE3AQ14432 1141 aa19.42■□□□□ 0.7
PUDP-206ENST00000540122 USP6NLQ92738 828 aa19.42■□□□□ 0.7
PUDP-206ENST00000540122 ALDH1L1O75891 902 aa19.41■□□□□ 0.7
PUDP-206ENST00000540122 MAP3K12Q12852 859 aa19.41■□□□□ 0.7
PUDP-206ENST00000540122 BICC1Q9H694 974 aaKnown RBP19.41■□□□□ 0.7
PUDP-206ENST00000540122 TXNRD2Q9NNW7 524 aa19.41■□□□□ 0.7
PUDP-206ENST00000540122 DDX4Q9NQI0 724 aaKnown RBP19.41■□□□□ 0.7
PUDP-206ENST00000540122 FAM196BA6NMK8 535 aa19.4■□□□□ 0.7
PUDP-206ENST00000540122 RGS2P41220 211 aa19.4■□□□□ 0.7
PUDP-206ENST00000540122 RABL6Q3YEC7 729 aaPredicted RBP19.4■□□□□ 0.7
PUDP-206ENST00000540122 GPRC5AQ8NFJ5 357 aa19.4■□□□□ 0.7
PUDP-206ENST00000540122 KLHDC4Q8TBB5 520 aa19.4■□□□□ 0.7
PUDP-206ENST00000540122 APBA2Q99767 749 aa19.4■□□□□ 0.7
PUDP-206ENST00000540122 FRMPD3Q5JV73 1810 aa19.39■□□□□ 0.7
PUDP-206ENST00000540122 NBPF7P0C2Y1 421 aaPredicted RBP19.39■□□□□ 0.69
PUDP-206ENST00000540122 MAPK4P31152 587 aa19.39■□□□□ 0.69
PUDP-206ENST00000540122 IRX3P78415 501 aaPredicted RBP19.39■□□□□ 0.69
PUDP-206ENST00000540122 PICALMQ13492 652 aa19.39■□□□□ 0.69
PUDP-206ENST00000540122 SH3D19Q5HYK7 790 aa19.39■□□□□ 0.69
PUDP-206ENST00000540122 MORN1Q5T089 497 aa19.39■□□□□ 0.69
PUDP-206ENST00000540122 BADQ92934 168 aa19.39■□□□□ 0.69
PUDP-206ENST00000540122 TBC1D2Q9BYX2 928 aa19.39■□□□□ 0.69
PUDP-206ENST00000540122 PRDM5Q9NQX1 630 aaPredicted RBP19.39■□□□□ 0.69
PUDP-206ENST00000540122 ATP11BQ9Y2G3 1177 aa19.39■□□□□ 0.69
PUDP-206ENST00000540122 GAKO14976 1311 aa19.39■□□□□ 0.69
PUDP-206ENST00000540122 MYH13Q9UKX3 1938 aa19.39■□□□□ 0.69
PUDP-206ENST00000540122 DNM1LO00429 736 aa19.38■□□□□ 0.69
PUDP-206ENST00000540122 TBC1D12O60347 775 aa19.38■□□□□ 0.69
PUDP-206ENST00000540122 CACNA1FO60840 1977 aa19.38■□□□□ 0.69
PUDP-206ENST00000540122 VAMP4O75379 141 aa19.38■□□□□ 0.69
PUDP-206ENST00000540122 SLC5A1P13866 664 aa19.38■□□□□ 0.69
PUDP-206ENST00000540122 GRIN2CQ14957 1233 aa19.38■□□□□ 0.69
PUDP-206ENST00000540122 ANKRD44Q8N8A2 993 aa19.38■□□□□ 0.69
PUDP-206ENST00000540122 P2RX7Q99572 595 aaKnown RBP19.38■□□□□ 0.69
PUDP-206ENST00000540122 OSBPL5Q9H0X9 879 aaPredicted RBP19.38■□□□□ 0.69
PUDP-206ENST00000540122 SALL1Q9NSC2 1324 aa19.38■□□□□ 0.69
PUDP-206ENST00000540122 HERVK_113P62684 666 aa19.37■□□□□ 0.69
PUDP-206ENST00000540122 SLC4A10Q6U841 1118 aa19.37■□□□□ 0.69
PUDP-206ENST00000540122 GPR142Q7Z601 462 aa19.37■□□□□ 0.69
PUDP-206ENST00000540122 LPIN2Q92539 896 aa19.37■□□□□ 0.69
PUDP-206ENST00000540122 LPAR1Q92633 364 aa19.37■□□□□ 0.69
PUDP-206ENST00000540122 SRCIN1Q9C0H9 1055 aa19.37■□□□□ 0.69
PUDP-206ENST00000540122 PORCNQ9H237 461 aa19.37■□□□□ 0.69
PUDP-206ENST00000540122 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.37■□□□□ 0.69
PUDP-206ENST00000540122 DDX20Q9UHI6 824 aaKnown RBP19.37■□□□□ 0.69
PUDP-206ENST00000540122 UTYO14607 1347 aa19.36■□□□□ 0.69
PUDP-206ENST00000540122 FANCIQ9NVI1 1328 aa19.36■□□□□ 0.69
PUDP-206ENST00000540122 WWC1Q8IX03 1113 aa19.36■□□□□ 0.69
PUDP-206ENST00000540122 ADAMTS19Q8TE59 1207 aa19.36■□□□□ 0.69
PUDP-206ENST00000540122 ATXN2LQ8WWM7 1075 aaKnown RBP19.36■□□□□ 0.69
PUDP-206ENST00000540122 IL16Q14005 1332 aa19.35■□□□□ 0.69
PUDP-206ENST00000540122 USP17L5A8MUK1 530 aa19.35■□□□□ 0.69
PUDP-206ENST00000540122 HOXA7P31268 230 aaPredicted RBP19.35■□□□□ 0.69
PUDP-206ENST00000540122 RRP1BQ14684 758 aaKnown RBP19.35■□□□□ 0.69
PUDP-206ENST00000540122 CCDC27Q2M243 656 aa19.35■□□□□ 0.69
PUDP-206ENST00000540122 Q3C1V9 767 aa19.35■□□□□ 0.69
PUDP-206ENST00000540122 PLEKHH3Q7Z736 793 aa19.35■□□□□ 0.69
PUDP-206ENST00000540122 CCAR1Q8IX12 1150 aaKnown RBP19.35■□□□□ 0.69
PUDP-206ENST00000540122 RBPJLQ9UBG7 517 aa19.35■□□□□ 0.69
PUDP-206ENST00000540122 MSCO60682 206 aa19.34■□□□□ 0.69
PUDP-206ENST00000540122 ERVK-9P63128 1117 aa19.34■□□□□ 0.69
PUDP-206ENST00000540122 ERVK-24P63145 666 aa19.34■□□□□ 0.69
PUDP-206ENST00000540122 MTMR2Q13614 643 aa19.34■□□□□ 0.69
PUDP-206ENST00000540122 MFSD14CQ5VZR4 134 aa19.34■□□□□ 0.69
PUDP-206ENST00000540122 RNPC3Q96LT9 517 aaKnown RBP19.34■□□□□ 0.69
PUDP-206ENST00000540122 ASB2Q96Q27 587 aa19.34■□□□□ 0.69
PUDP-206ENST00000540122 AS3MTQ9HBK9 375 aa19.34■□□□□ 0.69
PUDP-206ENST00000540122 PDLIM7Q9NR12 457 aa19.34■□□□□ 0.69
PUDP-206ENST00000540122 FLRT1Q9NZU1 646 aa19.34■□□□□ 0.69
PUDP-206ENST00000540122 CAP2P40123 477 aa19.33■□□□□ 0.68
PUDP-206ENST00000540122 BTDP43251 543 aa19.33■□□□□ 0.68
PUDP-206ENST00000540122 MAP2K5Q13163 448 aa19.33■□□□□ 0.68
PUDP-206ENST00000540122 TRIM60Q495X7 471 aa19.33■□□□□ 0.68
PUDP-206ENST00000540122 SLC39A5Q6ZMH5 540 aa19.33■□□□□ 0.68
PUDP-206ENST00000540122 UHRF1Q96T88 793 aaPredicted RBP19.33■□□□□ 0.68
PUDP-206ENST00000540122 TRIM43BA6NCK2 446 aa19.32■□□□□ 0.68
PUDP-206ENST00000540122 CNGA1P29973 690 aa19.32■□□□□ 0.68
PUDP-206ENST00000540122 GJC2Q5T442 439 aaPredicted RBP19.32■□□□□ 0.68
PUDP-206ENST00000540122 SH3RF1Q7Z6J0 888 aa19.32■□□□□ 0.68
PUDP-206ENST00000540122 DZIP1Q86YF9 867 aaKnown RBP19.32■□□□□ 0.68
PUDP-206ENST00000540122 TRIM43Q96BQ3 446 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms