RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 TMEM67Q5HYA8 995 aa13.83□□□□□ -0.2
VTN-202ENST00000539746 C16orf86Q6ZW13 317 aa13.83□□□□□ -0.2
VTN-202ENST00000539746 CATIPQ7Z7H3 387 aa13.83□□□□□ -0.2
VTN-202ENST00000539746 DGKHQ86XP1 1220 aa13.83□□□□□ -0.2
VTN-202ENST00000539746 MAPKAPK5Q8IW41 473 aa13.83□□□□□ -0.2
VTN-202ENST00000539746 ZNF384Q8TF68 577 aa13.83□□□□□ -0.2
VTN-202ENST00000539746 FAM151AQ8WW52 585 aa13.83□□□□□ -0.2
VTN-202ENST00000539746 WASF1Q92558 559 aa13.83□□□□□ -0.2
VTN-202ENST00000539746 AGXT2Q9BYV1 514 aa13.83□□□□□ -0.2
VTN-202ENST00000539746 TCP11L1Q9NUJ3 509 aa13.83□□□□□ -0.2
VTN-202ENST00000539746 RNF181Q9P0P0 153 aa13.83□□□□□ -0.2
VTN-202ENST00000539746 MKRN1Q9UHC7 482 aaKnown RBP13.83□□□□□ -0.2
VTN-202ENST00000539746 ATP6V1DQ9Y5K8 247 aa13.83□□□□□ -0.2
VTN-202ENST00000539746 SLC12A7Q9Y666 1083 aa13.83□□□□□ -0.2
VTN-202ENST00000539746 LAMA4Q16363 1823 aa13.83□□□□□ -0.2
VTN-202ENST00000539746 ATRNL1Q5VV63 1379 aa13.83□□□□□ -0.2
VTN-202ENST00000539746 PRKAB2O43741 272 aa13.82□□□□□ -0.2
VTN-202ENST00000539746 PTMSP20962 102 aa13.82□□□□□ -0.2
VTN-202ENST00000539746 GNAQP50148 359 aa13.82□□□□□ -0.2
VTN-202ENST00000539746 AK2P54819 239 aa13.82□□□□□ -0.2
VTN-202ENST00000539746 EVCP57679 992 aa13.82□□□□□ -0.2
VTN-202ENST00000539746 EXOSC10Q01780 885 aaKnown RBP13.82□□□□□ -0.2
VTN-202ENST00000539746 SPDYE2Q495Y8 402 aa13.82□□□□□ -0.2
VTN-202ENST00000539746 RRP12Q5JTH9 1297 aaKnown RBP13.82□□□□□ -0.2
VTN-202ENST00000539746 DCAF15Q66K64 600 aa13.82□□□□□ -0.2
VTN-202ENST00000539746 Q6ZUG5 572 aa13.82□□□□□ -0.2
VTN-202ENST00000539746 SGMS1Q86VZ5 419 aa13.82□□□□□ -0.2
VTN-202ENST00000539746 MB21D2Q8IYB1 491 aaPredicted RBP13.82□□□□□ -0.2
VTN-202ENST00000539746 MAP3K14Q99558 947 aa13.82□□□□□ -0.2
VTN-202ENST00000539746 SH2D4AQ9H788 454 aa13.82□□□□□ -0.2
VTN-202ENST00000539746 SMC3Q9UQE7 1217 aa13.82□□□□□ -0.2
VTN-202ENST00000539746 GJA3Q9Y6H8 435 aa13.82□□□□□ -0.2
VTN-202ENST00000539746 MYH2Q9UKX2 1941 aa13.82□□□□□ -0.2
VTN-202ENST00000539746 KDM4AO75164 1064 aa13.81□□□□□ -0.2
VTN-202ENST00000539746 WDHD1O75717 1129 aaPredicted RBP13.81□□□□□ -0.2
VTN-202ENST00000539746 DDAH1O94760 285 aa13.81□□□□□ -0.2
VTN-202ENST00000539746 PICALMQ13492 652 aa13.81□□□□□ -0.2
VTN-202ENST00000539746 CUL4AQ13619 759 aa13.81□□□□□ -0.2
VTN-202ENST00000539746 ADCK5Q3MIX3 580 aa13.81□□□□□ -0.2
VTN-202ENST00000539746 IFIT1BQ5T764 474 aaKnown RBP13.81□□□□□ -0.2
VTN-202ENST00000539746 FAM177A1Q8N128 213 aaPredicted RBP13.81□□□□□ -0.2
VTN-202ENST00000539746 TMX3Q96JJ7 454 aa13.81□□□□□ -0.2
VTN-202ENST00000539746 ZSCAN10Q96SZ4 725 aaPredicted RBP13.81□□□□□ -0.2
VTN-202ENST00000539746 LZTS2Q9BRK4 669 aa13.81□□□□□ -0.2
VTN-202ENST00000539746 CABP5Q9NP86 173 aa13.81□□□□□ -0.2
VTN-202ENST00000539746 RBM28Q9NW13 759 aaKnown RBP13.81□□□□□ -0.2
VTN-202ENST00000539746 CHMP5Q9NZZ3 219 aa13.81□□□□□ -0.2
VTN-202ENST00000539746 CNOT7Q9UIV1 285 aaKnown RBP13.81□□□□□ -0.2
VTN-202ENST00000539746 PITPNM2Q9BZ72 1349 aa13.81□□□□□ -0.2
VTN-202ENST00000539746 FOXP2O15409 715 aa13.8□□□□□ -0.2
VTN-202ENST00000539746 TBC1D12O60347 775 aa13.8□□□□□ -0.2
VTN-202ENST00000539746 XBP1P17861 261 aa13.8□□□□□ -0.2
VTN-202ENST00000539746 GMPSP49915 693 aaPredicted RBP13.8□□□□□ -0.2
VTN-202ENST00000539746 RASSF7Q02833 373 aa13.8□□□□□ -0.2
VTN-202ENST00000539746 SLFNL1Q499Z3 407 aa13.8□□□□□ -0.2
VTN-202ENST00000539746 PNMA8AQ86V59 439 aaPredicted RBP13.8□□□□□ -0.2
VTN-202ENST00000539746 TBC1D10CQ8IV04 446 aa13.8□□□□□ -0.2
VTN-202ENST00000539746 MICALL2Q8IY33 904 aa13.8□□□□□ -0.2
VTN-202ENST00000539746 TRIM22Q8IYM9 498 aa13.8□□□□□ -0.2
VTN-202ENST00000539746 BRF1Q92994 677 aa13.8□□□□□ -0.2
VTN-202ENST00000539746 KAT14Q9H8E8 782 aa13.8□□□□□ -0.2
VTN-202ENST00000539746 ADARB2Q9NS39 739 aaKnown RBP13.8□□□□□ -0.2
VTN-202ENST00000539746 B4E1Z4 1266 aa13.79□□□□□ -0.2
VTN-202ENST00000539746 ZBTB43O43298 467 aa13.79□□□□□ -0.2
VTN-202ENST00000539746 CHGBP05060 677 aa13.79□□□□□ -0.2
VTN-202ENST00000539746 AKAP17AQ02040 695 aaKnown RBP13.79□□□□□ -0.2
VTN-202ENST00000539746 CTDSPL2Q05D32 466 aa13.79□□□□□ -0.2
VTN-202ENST00000539746 TRAF1Q13077 416 aa13.79□□□□□ -0.2
VTN-202ENST00000539746 KIF4BQ2VIQ3 1234 aa13.79□□□□□ -0.2
VTN-202ENST00000539746 SUPT20HL1Q3ZLR7 823 aa13.79□□□□□ -0.2
VTN-202ENST00000539746 FAM184AQ8NB25 1140 aa13.79□□□□□ -0.2
VTN-202ENST00000539746 CTCFLQ8NI51 663 aaPredicted RBP13.79□□□□□ -0.2
VTN-202ENST00000539746 ZC3H15Q8WU90 426 aaKnown RBP13.79□□□□□ -0.2
VTN-202ENST00000539746 GPRC5DQ9NZD1 345 aa13.79□□□□□ -0.2
VTN-202ENST00000539746 ZSWIM5Q9P217 1185 aa13.79□□□□□ -0.2
VTN-202ENST00000539746 ZNF70Q9UC06 446 aaPredicted RBP13.79□□□□□ -0.2
VTN-202ENST00000539746 NAP1L2Q9ULW6 460 aaPredicted RBP13.79□□□□□ -0.2
VTN-202ENST00000539746 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.79□□□□□ -0.2
VTN-202ENST00000539746 PLIN4Q96Q06 1357 aa13.79□□□□□ -0.2
VTN-202ENST00000539746 GOLGA8BA8MQT2 603 aa13.78□□□□□ -0.2
VTN-202ENST00000539746 GOLGA6L22H0YM25 854 aa13.78□□□□□ -0.2
VTN-202ENST00000539746 SH2B2O14492 632 aaPredicted RBP13.78□□□□□ -0.2
VTN-202ENST00000539746 PFKFB2O60825 505 aa13.78□□□□□ -0.2
VTN-202ENST00000539746 NF2P35240 595 aa13.78□□□□□ -0.2
VTN-202ENST00000539746 METAP2P50579 478 aaKnown RBP eCLIP13.78□□□□□ -0.2
VTN-202ENST00000539746 C9orf131Q5VYM1 1079 aa13.78□□□□□ -0.2
VTN-202ENST00000539746 USP50Q70EL3 339 aaPredicted RBP13.78□□□□□ -0.2
VTN-202ENST00000539746 NEDD1Q8NHV4 660 aa13.78□□□□□ -0.2
VTN-202ENST00000539746 L3MBTL3Q96JM7 780 aaPredicted RBP13.78□□□□□ -0.2
VTN-202ENST00000539746 CSRNP1Q96S65 589 aa13.78□□□□□ -0.2
VTN-202ENST00000539746 VEZTQ9HBM0 779 aa13.78□□□□□ -0.2
VTN-202ENST00000539746 KLF18A0A0U1RQI7 1052 aa13.77□□□□□ -0.21
VTN-202ENST00000539746 TNKSO95271 1327 aa13.77□□□□□ -0.21
VTN-202ENST00000539746 LAMB1P07942 1786 aa13.77□□□□□ -0.21
VTN-202ENST00000539746 NEDD4P46934 1319 aa13.77□□□□□ -0.21
VTN-202ENST00000539746 CDK8P49336 464 aa13.77□□□□□ -0.21
VTN-202ENST00000539746 TFAP4Q01664 338 aa13.77□□□□□ -0.21
VTN-202ENST00000539746 TRIM29Q14134 588 aa13.77□□□□□ -0.21
VTN-202ENST00000539746 GRIK5Q16478 980 aa13.77□□□□□ -0.21
VTN-202ENST00000539746 RCSD1Q6JBY9 416 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms