RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 OSBPL5Q9H0X9 879 aaPredicted RBP10.04□□□□□ -0.8
CD4-209ENST00000539492 NR2E3Q9Y5X4 410 aa10.04□□□□□ -0.8
CD4-209ENST00000539492 ZBTB7BO15156 539 aaPredicted RBP10.03□□□□□ -0.8
CD4-209ENST00000539492 ELNP15502 786 aa10.03□□□□□ -0.8
CD4-209ENST00000539492 GSTO1P78417 241 aa10.03□□□□□ -0.8
CD4-209ENST00000539492 TFCP2Q12800 502 aa10.03□□□□□ -0.8
CD4-209ENST00000539492 CCDC84Q86UT8 332 aaPredicted RBP10.03□□□□□ -0.8
CD4-209ENST00000539492 ANKRD13CQ8N6S4 541 aa10.03□□□□□ -0.8
CD4-209ENST00000539492 ZNF384Q8TF68 577 aa10.03□□□□□ -0.8
CD4-209ENST00000539492 ARHGAP45Q92619 1136 aa10.03□□□□□ -0.8
CD4-209ENST00000539492 NSUN4Q96CB9 384 aaKnown RBP10.03□□□□□ -0.8
CD4-209ENST00000539492 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.03□□□□□ -0.8
CD4-209ENST00000539492 RBM27Q9P2N5 1060 aaKnown RBP10.03□□□□□ -0.8
CD4-209ENST00000539492 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.03□□□□□ -0.8
CD4-209ENST00000539492 DDX60LQ5H9U9 1706 aaKnown RBP10.02□□□□□ -0.8
CD4-209ENST00000539492 ARID4AP29374 1257 aaPredicted RBP10.02□□□□□ -0.81
CD4-209ENST00000539492 GCLCP48506 637 aaPredicted RBP10.02□□□□□ -0.81
CD4-209ENST00000539492 RARSP54136 660 aaKnown RBP10.02□□□□□ -0.81
CD4-209ENST00000539492 PABPC4Q13310 644 aaKnown RBP eCLIP10.02□□□□□ -0.81
CD4-209ENST00000539492 TREML2Q5T2D2 321 aa10.02□□□□□ -0.81
CD4-209ENST00000539492 GORABQ5T7V8 394 aa10.02□□□□□ -0.81
CD4-209ENST00000539492 SPATA5Q8NB90 893 aa10.02□□□□□ -0.81
CD4-209ENST00000539492 ZNF280CQ8ND82 737 aa10.02□□□□□ -0.81
CD4-209ENST00000539492 NEUROD6Q96NK8 337 aa10.02□□□□□ -0.81
CD4-209ENST00000539492 PRO3102Q9H379 93 aa10.02□□□□□ -0.81
CD4-209ENST00000539492 PAK6Q9NQU5 681 aaPredicted RBP10.02□□□□□ -0.81
CD4-209ENST00000539492 HMG20BQ9P0W2 317 aa10.02□□□□□ -0.81
CD4-209ENST00000539492 COL6A3P12111 3177 aa10.01□□□□□ -0.81
CD4-209ENST00000539492 FAM196BA6NMK8 535 aa10.01□□□□□ -0.81
CD4-209ENST00000539492 TFRCP02786 760 aaKnown RBP10.01□□□□□ -0.81
CD4-209ENST00000539492 HMGCS2P54868 508 aa10.01□□□□□ -0.81
CD4-209ENST00000539492 SPP2Q13103 211 aa10.01□□□□□ -0.81
CD4-209ENST00000539492 PI16Q6UXB8 463 aa10.01□□□□□ -0.81
CD4-209ENST00000539492 TEX11Q8IYF3 940 aa10.01□□□□□ -0.81
CD4-209ENST00000539492 DEFB118Q96PH6 123 aa10.01□□□□□ -0.81
CD4-209ENST00000539492 CRISPLD2Q9H0B8 497 aa10.01□□□□□ -0.81
CD4-209ENST00000539492 RAI14Q9P0K7 980 aa10.01□□□□□ -0.81
CD4-209ENST00000539492 HERC5Q9UII4 1024 aaKnown RBP10.01□□□□□ -0.81
CD4-209ENST00000539492 TAOK2Q9UL54 1235 aa10.01□□□□□ -0.81
CD4-209ENST00000539492 FRMPD3Q5JV73 1810 aa10□□□□□ -0.81
CD4-209ENST00000539492 A0A1W2PPC1 479 aa10□□□□□ -0.81
CD4-209ENST00000539492 USP17L5A8MUK1 530 aa10□□□□□ -0.81
CD4-209ENST00000539492 EVI5O60447 810 aa10□□□□□ -0.81
CD4-209ENST00000539492 HMGCRP04035 888 aa10□□□□□ -0.81
CD4-209ENST00000539492 GNAI2P04899 355 aa10□□□□□ -0.81
CD4-209ENST00000539492 UQCRFS1P1P0C7P4 283 aa10□□□□□ -0.81
CD4-209ENST00000539492 CAP2P40123 477 aa10□□□□□ -0.81
CD4-209ENST00000539492 MCAMP43121 646 aa10□□□□□ -0.81
CD4-209ENST00000539492 G3BP1Q13283 466 aaKnown RBP eCLIP10□□□□□ -0.81
CD4-209ENST00000539492 SH3D19Q5HYK7 790 aa10□□□□□ -0.81
CD4-209ENST00000539492 TBC1D9Q6ZT07 1266 aa10□□□□□ -0.81
CD4-209ENST00000539492 NOL10Q9BSC4 688 aaKnown RBP10□□□□□ -0.81
CD4-209ENST00000539492 XRN2Q9H0D6 950 aaKnown RBP eCLIP10□□□□□ -0.81
CD4-209ENST00000539492 AS3MTQ9HBK9 375 aa10□□□□□ -0.81
CD4-209ENST00000539492 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10□□□□□ -0.81
CD4-209ENST00000539492 MYH8P13535 1937 aa9.99□□□□□ -0.81
CD4-209ENST00000539492 IPO8O15397 1037 aaKnown RBP9.99□□□□□ -0.81
CD4-209ENST00000539492 TRIM27P14373 513 aa9.99□□□□□ -0.81
CD4-209ENST00000539492 PLCG2P16885 1265 aa9.99□□□□□ -0.81
CD4-209ENST00000539492 RRP1BQ14684 758 aaKnown RBP9.99□□□□□ -0.81
CD4-209ENST00000539492 NECAB2Q7Z6G3 386 aa9.99□□□□□ -0.81
CD4-209ENST00000539492 ANKLE1Q8NAG6 615 aa9.99□□□□□ -0.81
CD4-209ENST00000539492 ASCC2Q9H1I8 757 aaPredicted RBP9.99□□□□□ -0.81
CD4-209ENST00000539492 DHX36Q9H2U1 1008 aaKnown RBP9.99□□□□□ -0.81
CD4-209ENST00000539492 LRP2BPQ9P2M1 347 aa9.99□□□□□ -0.81
CD4-209ENST00000539492 PI4KBQ9UBF8 816 aa9.99□□□□□ -0.81
CD4-209ENST00000539492 PNMA6EA0A0J9YXQ4 647 aa9.98□□□□□ -0.81
CD4-209ENST00000539492 BAG3O95817 575 aa9.98□□□□□ -0.81
CD4-209ENST00000539492 ASNSP08243 561 aa9.98□□□□□ -0.81
CD4-209ENST00000539492 IRX3P78415 501 aaPredicted RBP9.98□□□□□ -0.81
CD4-209ENST00000539492 ATF7IPQ6VMQ6 1270 aa9.98□□□□□ -0.81
CD4-209ENST00000539492 SH3RF3Q8TEJ3 882 aaPredicted RBP9.98□□□□□ -0.81
CD4-209ENST00000539492 PAWRQ96IZ0 340 aaKnown RBP9.98□□□□□ -0.81
CD4-209ENST00000539492 WDR18Q9BV38 432 aa9.98□□□□□ -0.81
CD4-209ENST00000539492 GINM1Q9NU53 330 aa9.98□□□□□ -0.81
CD4-209ENST00000539492 AATFQ9NY61 560 aaKnown RBP eCLIP9.98□□□□□ -0.81
CD4-209ENST00000539492 MORF4L1Q9UBU8 362 aa9.98□□□□□ -0.81
CD4-209ENST00000539492 GJD2Q9UKL4 321 aa9.98□□□□□ -0.81
CD4-209ENST00000539492 RPTORQ8N122 1335 aa9.98□□□□□ -0.81
CD4-209ENST00000539492 MYO9BQ13459 2157 aa9.98□□□□□ -0.81
CD4-209ENST00000539492 A0A0C4DFX4 3053 aa9.97□□□□□ -0.81
CD4-209ENST00000539492 IGSF3O75054 1194 aa9.97□□□□□ -0.81
CD4-209ENST00000539492 HOXA7P31268 230 aaPredicted RBP9.97□□□□□ -0.81
CD4-209ENST00000539492 BACE1P56817 501 aa9.97□□□□□ -0.81
CD4-209ENST00000539492 PPP4CP60510 307 aa9.97□□□□□ -0.81
CD4-209ENST00000539492 MTMR2Q13614 643 aa9.97□□□□□ -0.81
CD4-209ENST00000539492 TTC39AQ5SRH9 613 aa9.97□□□□□ -0.81
CD4-209ENST00000539492 NAA16Q6N069 864 aaPredicted RBP9.97□□□□□ -0.81
CD4-209ENST00000539492 DIS3LQ8TF46 1054 aaKnown RBP9.97□□□□□ -0.81
CD4-209ENST00000539492 HMX1Q9NP08 348 aaPredicted RBP9.97□□□□□ -0.81
CD4-209ENST00000539492 GPR108Q9NPR9 543 aa9.97□□□□□ -0.81
CD4-209ENST00000539492 TMOD4Q9NZQ9 345 aa9.97□□□□□ -0.81
CD4-209ENST00000539492 FLT1P17948 1338 aa9.97□□□□□ -0.81
CD4-209ENST00000539492 NAV1Q8NEY1 1877 aa9.97□□□□□ -0.81
CD4-209ENST00000539492 ZNFX1Q9P2E3 1918 aaKnown RBP9.96□□□□□ -0.81
CD4-209ENST00000539492 C19orf81C9J6K1 198 aa9.96□□□□□ -0.82
CD4-209ENST00000539492 HERVK_113P62684 666 aa9.96□□□□□ -0.82
CD4-209ENST00000539492 TNNI3KQ59H18 835 aa9.96□□□□□ -0.82
CD4-209ENST00000539492 CCDC158Q5M9N0 1113 aa9.96□□□□□ -0.82
CD4-209ENST00000539492 METTL16Q86W50 562 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms