RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 GMLQ99445 158 aa10.39□□□□□ -0.75
DDB1-213ENST00000539332 NOL10Q9BSC4 688 aaKnown RBP10.39□□□□□ -0.75
DDB1-213ENST00000539332 CNNM2Q9H8M5 875 aa10.39□□□□□ -0.75
DDB1-213ENST00000539332 ATP8A2Q9NTI2 1148 aa10.39□□□□□ -0.75
DDB1-213ENST00000539332 DAGLAQ9Y4D2 1042 aa10.39□□□□□ -0.75
DDB1-213ENST00000539332 FZD9O00144 591 aa10.38□□□□□ -0.75
DDB1-213ENST00000539332 PRC1O43663 620 aa10.38□□□□□ -0.75
DDB1-213ENST00000539332 OFD1O75665 1012 aa10.38□□□□□ -0.75
DDB1-213ENST00000539332 FGRP09769 529 aa10.38□□□□□ -0.75
DDB1-213ENST00000539332 BTDP43251 543 aa10.38□□□□□ -0.75
DDB1-213ENST00000539332 HDLBPQ00341 1268 aaKnown RBP10.38□□□□□ -0.75
DDB1-213ENST00000539332 TNIP1Q15025 636 aa10.38□□□□□ -0.75
DDB1-213ENST00000539332 CIAPIN1Q6FI81 312 aa10.38□□□□□ -0.75
DDB1-213ENST00000539332 RALYLQ86SE5 291 aaKnown RBP10.38□□□□□ -0.75
DDB1-213ENST00000539332 CERS3Q8IU89 383 aa10.38□□□□□ -0.75
DDB1-213ENST00000539332 NECAB1Q8N987 351 aa10.38□□□□□ -0.75
DDB1-213ENST00000539332 SDR42E1Q8WUS8 393 aa10.38□□□□□ -0.75
DDB1-213ENST00000539332 MRIQ9BWK5 157 aa10.38□□□□□ -0.75
DDB1-213ENST00000539332 LRRC2Q9BYS8 371 aa10.38□□□□□ -0.75
DDB1-213ENST00000539332 CRNKL1Q9BZJ0 848 aaKnown RBP10.38□□□□□ -0.75
DDB1-213ENST00000539332 SMC3Q9UQE7 1217 aa10.38□□□□□ -0.75
DDB1-213ENST00000539332 MTMR7Q9Y216 660 aa10.38□□□□□ -0.75
DDB1-213ENST00000539332 ZBTB12Q9Y330 459 aaPredicted RBP10.38□□□□□ -0.75
DDB1-213ENST00000539332 NID2Q14112 1375 aa10.38□□□□□ -0.75
DDB1-213ENST00000539332 BAG4O95429 457 aaKnown RBP10.37□□□□□ -0.75
DDB1-213ENST00000539332 PCP11498 1178 aaKnown RBP10.37□□□□□ -0.75
DDB1-213ENST00000539332 CRKP46108 304 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 TDO2P48775 406 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 PPARAQ07869 468 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 TRDNQ13061 729 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 SBK1Q52WX2 424 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 CYB5R4Q7L1T6 521 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 AGBL3Q8NEM8 1001 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 SMARCC2Q8TAQ2 1214 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 NKX2-3Q8TAU0 364 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 SH3RF3Q8TEJ3 882 aaPredicted RBP10.37□□□□□ -0.75
DDB1-213ENST00000539332 TMEM87BQ96K49 555 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 ZDHHC15Q96MV8 337 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 LLPHQ9BRT6 129 aaKnown RBP10.37□□□□□ -0.75
DDB1-213ENST00000539332 MKRN1Q9UHC7 482 aaKnown RBP10.37□□□□□ -0.75
DDB1-213ENST00000539332 SERPINA10Q9UK55 444 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 ROBO3Q96MS0 1386 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 WDR33Q9C0J8 1336 aaKnown RBP10.37□□□□□ -0.75
DDB1-213ENST00000539332 B4E1Z4 1266 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 PLCG2P16885 1265 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 SYT1P21579 422 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 MSNP26038 577 aaKnown RBP10.37□□□□□ -0.75
DDB1-213ENST00000539332 GJB2P29033 226 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 EIF6P56537 245 aaKnown RBP10.37□□□□□ -0.75
DDB1-213ENST00000539332 RHBDL3P58872 404 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 APOBRQ0VD83 1088 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 GPR162Q16538 588 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 APOBEC3HQ6NTF7 200 aaKnown RBP10.37□□□□□ -0.75
DDB1-213ENST00000539332 SGMS1Q86VZ5 419 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 KRT23Q9C075 422 aa10.37□□□□□ -0.75
DDB1-213ENST00000539332 RNF41Q9H4P4 317 aaPredicted RBP10.37□□□□□ -0.75
DDB1-213ENST00000539332 DCP1AQ9NPI6 582 aaPredicted RBP10.37□□□□□ -0.75
DDB1-213ENST00000539332 SH2B2O14492 632 aaPredicted RBP10.36□□□□□ -0.75
DDB1-213ENST00000539332 USP17L8P0C7I0 530 aa10.36□□□□□ -0.75
DDB1-213ENST00000539332 PDIA3P30101 505 aaKnown RBP10.36□□□□□ -0.75
DDB1-213ENST00000539332 NASPP49321 788 aaPredicted RBP10.36□□□□□ -0.75
DDB1-213ENST00000539332 CTDSPL2Q05D32 466 aa10.36□□□□□ -0.75
DDB1-213ENST00000539332 SCRN1Q12765 414 aa10.36□□□□□ -0.75
DDB1-213ENST00000539332 KLHL40Q2TBA0 621 aa10.36□□□□□ -0.75
DDB1-213ENST00000539332 OGFOD1Q8N543 542 aa10.36□□□□□ -0.75
DDB1-213ENST00000539332 IGDCC4Q8TDY8 1250 aa10.36□□□□□ -0.75
DDB1-213ENST00000539332 ANGEL1Q9UNK9 670 aaKnown RBP10.36□□□□□ -0.75
DDB1-213ENST00000539332 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.36□□□□□ -0.75
DDB1-213ENST00000539332 PCDHAC2Q9Y5I4 1007 aa10.36□□□□□ -0.75
DDB1-213ENST00000539332 ZNF541Q9H0D2 1346 aa10.35□□□□□ -0.75
DDB1-213ENST00000539332 SIPA1L1O43166 1804 aa10.35□□□□□ -0.75
DDB1-213ENST00000539332 STX6O43752 255 aa10.35□□□□□ -0.75
DDB1-213ENST00000539332 RPS12P25398 132 aaKnown RBP10.35□□□□□ -0.75
DDB1-213ENST00000539332 LIFRP42702 1097 aa10.35□□□□□ -0.75
DDB1-213ENST00000539332 NT5C2P49902 561 aa10.35□□□□□ -0.75
DDB1-213ENST00000539332 RBM5P52756 815 aaKnown RBP eCLIP10.35□□□□□ -0.75
DDB1-213ENST00000539332 FGD1P98174 961 aa10.35□□□□□ -0.75
DDB1-213ENST00000539332 CSPP1Q1MSJ5 1256 aa10.35□□□□□ -0.75
DDB1-213ENST00000539332 CTR9Q6PD62 1173 aa10.35□□□□□ -0.75
DDB1-213ENST00000539332 MFSD6Q6ZSS7 791 aa10.35□□□□□ -0.75
DDB1-213ENST00000539332 CHST3Q7LGC8 479 aa10.35□□□□□ -0.75
DDB1-213ENST00000539332 TEX11Q8IYF3 940 aa10.35□□□□□ -0.75
DDB1-213ENST00000539332 NSUN7Q8NE18 718 aaKnown RBP10.35□□□□□ -0.75
DDB1-213ENST00000539332 CHMP4CQ96CF2 233 aa10.35□□□□□ -0.75
DDB1-213ENST00000539332 GPHNQ9NQX3 736 aaPredicted RBP10.35□□□□□ -0.75
DDB1-213ENST00000539332 RNF181Q9P0P0 153 aa10.35□□□□□ -0.75
DDB1-213ENST00000539332 ARPP21Q9UBL0 812 aaPredicted RBP10.35□□□□□ -0.75
DDB1-213ENST00000539332 HPS5Q9UPZ3 1129 aa10.35□□□□□ -0.75
DDB1-213ENST00000539332 GREB1LQ9C091 1923 aaPredicted RBP10.35□□□□□ -0.75
DDB1-213ENST00000539332 ORC4O43929 436 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 GRIN3BO60391 1043 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 CTDNEP1O95476 244 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 ZSCAN22P10073 491 aaPredicted RBP10.34□□□□□ -0.75
DDB1-213ENST00000539332 PDCP20941 246 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 USP5P45974 858 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 CFAP100Q494V2 611 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 CDC42EP5Q6NZY7 148 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 TGFBRAP1Q8WUH2 860 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 LY9Q9HBG7 655 aa10.34□□□□□ -0.75
DDB1-213ENST00000539332 ZSWIM5Q9P217 1185 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms