RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 C15orf52Q6ZUT6 534 aaKnown RBP7.67□□□□□ -1.18
USP28-206ENST00000538224 TMC4Q7Z404 712 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 ZNF804AQ7Z570 1209 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 CATIPQ7Z7H3 387 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 DZIP1Q86YF9 867 aaKnown RBP7.67□□□□□ -1.18
USP28-206ENST00000538224 FMR1NBQ8N0W7 255 aaPredicted RBP7.67□□□□□ -1.18
USP28-206ENST00000538224 CNBD1Q8NA66 436 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 GRAPLQ8TC17 118 aaPredicted RBP7.67□□□□□ -1.18
USP28-206ENST00000538224 CELF1Q92879 486 aaKnown RBP7.67□□□□□ -1.18
USP28-206ENST00000538224 NSUN4Q96CB9 384 aaKnown RBP7.67□□□□□ -1.18
USP28-206ENST00000538224 CCDC34Q96HJ3 373 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 GJD4Q96KN9 370 aaPredicted RBP7.67□□□□□ -1.18
USP28-206ENST00000538224 NAP1L5Q96NT1 182 aaPredicted RBP7.67□□□□□ -1.18
USP28-206ENST00000538224 BPIFA3Q9BQP9 254 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 SLC26A6Q9BXS9 759 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 BCL11BQ9C0K0 894 aaPredicted RBP7.67□□□□□ -1.18
USP28-206ENST00000538224 FOXP1Q9H334 677 aaPredicted RBP7.67□□□□□ -1.18
USP28-206ENST00000538224 CBX8Q9HC52 389 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 BRMS1Q9HCU9 246 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 TRPC5Q9UL62 973 aaPredicted RBP7.67□□□□□ -1.18
USP28-206ENST00000538224 PCDHA7Q9UN72 937 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.67□□□□□ -1.18
USP28-206ENST00000538224 TNKSO95271 1327 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 XDHP47989 1333 aa7.67□□□□□ -1.18
USP28-206ENST00000538224 LTBP1Q14766 1721 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 NRXN2Q9P2S2 1712 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 FAM237AA0A1B0GTK4 181 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 BECN2A8MW95 431 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 MINDY4BA8MYZ0 360 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 SNAP23O00161 211 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 NEMFO60524 1076 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 CUTAO60888 179 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 MMP1P03956 469 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 POLR3DP05423 398 aaPredicted RBP7.66□□□□□ -1.18
USP28-206ENST00000538224 LDHCP07864 332 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 CDC27P30260 824 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 PLCB2Q00722 1185 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 PDE4BQ07343 736 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 IFIT1BQ5T764 474 aaKnown RBP7.66□□□□□ -1.18
USP28-206ENST00000538224 C3orf67Q6ZVT6 689 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 NOSTRINQ8IVI9 506 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 ELOA2Q8IYF1 753 aaPredicted RBP7.66□□□□□ -1.18
USP28-206ENST00000538224 FANCBQ8NB91 859 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 PIBF1Q8WXW3 757 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 ARHGEF1Q92888 912 aaKnown RBP7.66□□□□□ -1.18
USP28-206ENST00000538224 ZSCAN10Q96SZ4 725 aaPredicted RBP7.66□□□□□ -1.18
USP28-206ENST00000538224 SDF4Q9BRK5 362 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 DNAJC25Q9H1X3 360 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 GOLPH3LQ9H4A5 285 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.66□□□□□ -1.18
USP28-206ENST00000538224 SRP68Q9UHB9 627 aaKnown RBP7.66□□□□□ -1.18
USP28-206ENST00000538224 CLIC4Q9Y696 253 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 AFF2P51816 1311 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 ROBO3Q96MS0 1386 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 MYH1P12882 1939 aa7.66□□□□□ -1.18
USP28-206ENST00000538224 KIF28PB7ZC32 967 aa7.65□□□□□ -1.18
USP28-206ENST00000538224 PRKAB2O43741 272 aa7.65□□□□□ -1.18
USP28-206ENST00000538224 MYO1BO43795 1136 aa7.65□□□□□ -1.18
USP28-206ENST00000538224 RANBP6O60518 1105 aaKnown RBP7.65□□□□□ -1.18
USP28-206ENST00000538224 BAG3O95817 575 aa7.65□□□□□ -1.18
USP28-206ENST00000538224 RBM6P78332 1123 aaKnown RBP7.65□□□□□ -1.18
USP28-206ENST00000538224 MECOMQ03112 1051 aa7.65□□□□□ -1.18
USP28-206ENST00000538224 SEC23AQ15436 765 aa7.65□□□□□ -1.18
USP28-206ENST00000538224 PLA2G4DQ86XP0 818 aa7.65□□□□□ -1.18
USP28-206ENST00000538224 RAB11FIP4Q86YS3 637 aa7.65□□□□□ -1.18
USP28-206ENST00000538224 SLF2Q8IX21 1173 aa7.65□□□□□ -1.18
USP28-206ENST00000538224 FAM177A1Q8N128 213 aaPredicted RBP7.65□□□□□ -1.18
USP28-206ENST00000538224 CRACR2BQ8N4Y2 399 aaPredicted RBP7.65□□□□□ -1.18
USP28-206ENST00000538224 CERKQ8TCT0 537 aa7.65□□□□□ -1.18
USP28-206ENST00000538224 SDR42E1Q8WUS8 393 aa7.65□□□□□ -1.18
USP28-206ENST00000538224 RPGRQ92834 1020 aaKnown RBP7.65□□□□□ -1.18
USP28-206ENST00000538224 PHKBQ93100 1093 aa7.65□□□□□ -1.18
USP28-206ENST00000538224 MRFAP1L1Q96HT8 127 aa7.65□□□□□ -1.18
USP28-206ENST00000538224 MAP3K14Q99558 947 aa7.65□□□□□ -1.18
USP28-206ENST00000538224 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.65□□□□□ -1.18
USP28-206ENST00000538224 FTOQ9C0B1 505 aaKnown RBP eCLIP7.65□□□□□ -1.18
USP28-206ENST00000538224 ZNF287Q9HBT7 754 aa7.65□□□□□ -1.18
USP28-206ENST00000538224 FAM217BQ9NTX9 383 aaPredicted RBP7.65□□□□□ -1.18
USP28-206ENST00000538224 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.65□□□□□ -1.18
USP28-206ENST00000538224 IQSEC3Q9UPP2 1182 aaPredicted RBP7.65□□□□□ -1.18
USP28-206ENST00000538224 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.65□□□□□ -1.18
USP28-206ENST00000538224 IRS2Q9Y4H2 1338 aa7.64□□□□□ -1.19
USP28-206ENST00000538224 SMTNL1A8MU46 457 aa7.64□□□□□ -1.19
USP28-206ENST00000538224 LDHBP07195 334 aaKnown RBP7.64□□□□□ -1.19
USP28-206ENST00000538224 PFKFB1P16118 471 aa7.64□□□□□ -1.19
USP28-206ENST00000538224 PLCG2P16885 1265 aa7.64□□□□□ -1.19
USP28-206ENST00000538224 RXRAP19793 462 aa7.64□□□□□ -1.19
USP28-206ENST00000538224 ATP2B4P23634 1241 aa7.64□□□□□ -1.19
USP28-206ENST00000538224 KIF5BP33176 963 aa7.64□□□□□ -1.19
USP28-206ENST00000538224 SYKP43405 635 aa7.64□□□□□ -1.19
USP28-206ENST00000538224 ZNF75DP51815 510 aa7.64□□□□□ -1.19
USP28-206ENST00000538224 NDUFA8P51970 172 aa7.64□□□□□ -1.19
USP28-206ENST00000538224 NLRP12P59046 1061 aa7.64□□□□□ -1.19
USP28-206ENST00000538224 AXDND1Q5T1B0 1012 aaPredicted RBP7.64□□□□□ -1.19
USP28-206ENST00000538224 RESP18Q5W5W9 173 aa7.64□□□□□ -1.19
USP28-206ENST00000538224 OTUD7BQ6GQQ9 843 aa7.64□□□□□ -1.19
USP28-206ENST00000538224 CTR9Q6PD62 1173 aa7.64□□□□□ -1.19
USP28-206ENST00000538224 ADGRA1Q86SQ6 560 aa7.64□□□□□ -1.19
USP28-206ENST00000538224 LUZP1Q86V48 1076 aa7.64□□□□□ -1.19
USP28-206ENST00000538224 DRC7Q8IY82 874 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms