RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 KCNJ14Q9UNX9 436 aa10.81□□□□□ -0.68
PTPRR-205ENST00000537619 KIAA1551Q9HCM1 1747 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 SEMA3EO15041 775 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 FGRP09769 529 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 CYP2D6P10635 497 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 FUT2Q10981 343 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 TPTE2Q6XPS3 522 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.8□□□□□ -0.68
PTPRR-205ENST00000537619 SYNE3Q6ZMZ3 975 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 CCDC82Q8N4S0 544 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 CRACR2BQ8N4Y2 399 aaPredicted RBP10.8□□□□□ -0.68
PTPRR-205ENST00000537619 ENAHQ8N8S7 591 aaPredicted RBP10.8□□□□□ -0.68
PTPRR-205ENST00000537619 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.8□□□□□ -0.68
PTPRR-205ENST00000537619 DLEC1Q9Y238 1755 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 BTBD18B2RXH4 712 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 MMP1P03956 469 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 CMA1P23946 247 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 TOB1P50616 345 aaPredicted RBP10.8□□□□□ -0.68
PTPRR-205ENST00000537619 KIAA2012Q0VF49 1180 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 GRIK5Q16478 980 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 SHC4Q6S5L8 630 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 NUP133Q8WUM0 1156 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 PIBF1Q8WXW3 757 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 GPR101Q96P66 508 aaPredicted RBP10.8□□□□□ -0.68
PTPRR-205ENST00000537619 ANKRD2Q9GZV1 360 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 AATFQ9NY61 560 aaKnown RBP eCLIP10.8□□□□□ -0.68
PTPRR-205ENST00000537619 NRBP1Q9UHY1 535 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 HPSEQ9Y251 543 aa10.8□□□□□ -0.68
PTPRR-205ENST00000537619 MYH2Q9UKX2 1941 aa10.79□□□□□ -0.68
PTPRR-205ENST00000537619 LAMB1P07942 1786 aa10.79□□□□□ -0.68
PTPRR-205ENST00000537619 AFF2P51816 1311 aa10.79□□□□□ -0.68
PTPRR-205ENST00000537619 USP17L12C9JPN9 530 aa10.79□□□□□ -0.68
PTPRR-205ENST00000537619 USP17L21D6R901 530 aa10.79□□□□□ -0.68
PTPRR-205ENST00000537619 ZNF202O95125 648 aa10.79□□□□□ -0.68
PTPRR-205ENST00000537619 PTGS1P23219 599 aa10.79□□□□□ -0.68
PTPRR-205ENST00000537619 RCAN1P53805 252 aa10.79□□□□□ -0.68
PTPRR-205ENST00000537619 SART3Q15020 963 aaKnown RBP10.79□□□□□ -0.68
PTPRR-205ENST00000537619 FANCBQ8NB91 859 aa10.79□□□□□ -0.68
PTPRR-205ENST00000537619 OXER1Q8TDS5 423 aa10.79□□□□□ -0.68
PTPRR-205ENST00000537619 ESR2Q92731 530 aa10.79□□□□□ -0.68
PTPRR-205ENST00000537619 FBXW7Q969H0 707 aa10.79□□□□□ -0.68
PTPRR-205ENST00000537619 CLIC6Q96NY7 704 aa10.79□□□□□ -0.68
PTPRR-205ENST00000537619 DCP1AQ9NPI6 582 aaPredicted RBP10.79□□□□□ -0.68
PTPRR-205ENST00000537619 PPP6R2O75170 966 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 PLEKHA8P1O95397 391 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 RFC4P35249 363 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 NR5A1Q13285 461 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 GRAPQ13588 217 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 PKN1Q16512 942 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 DIS3L2Q8IYB7 885 aaKnown RBP10.78□□□□□ -0.68
PTPRR-205ENST00000537619 GRAPLQ8TC17 118 aaPredicted RBP10.78□□□□□ -0.68
PTPRR-205ENST00000537619 ZSCAN10Q96SZ4 725 aaPredicted RBP10.78□□□□□ -0.68
PTPRR-205ENST00000537619 UBAC1Q9BSL1 405 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 ANO10Q9NW15 660 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 KIAA1468Q9P260 1216 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 R3HCC1Q9Y3T6 440 aaKnown RBP10.78□□□□□ -0.68
PTPRR-205ENST00000537619 FAM237AA0A1B0GTK4 181 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 ERICH2A1L162 156 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 ONECUT3O60422 494 aaPredicted RBP10.78□□□□□ -0.68
PTPRR-205ENST00000537619 NMT2O60551 498 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 GRIN1Q05586 938 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 DPCR1Q3MIW9 517 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 CCDC144BQ3MJ40 725 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 TRAPPC3LQ5T215 181 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 RESP18Q5W5W9 173 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 PRR5LQ6MZQ0 368 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 SARM1Q6SZW1 724 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 NOSTRINQ8IVI9 506 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 SEPT12Q8IYM1 358 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 TMTC2Q8N394 836 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 AOPEPQ8N6M6 819 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 SDF4Q9BRK5 362 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 TRIM5Q9C035 493 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 SPTLC3Q9NUV7 552 aa10.78□□□□□ -0.68
PTPRR-205ENST00000537619 UBR3Q6ZT12 1888 aa10.77□□□□□ -0.68
PTPRR-205ENST00000537619 hCG_1642624A0A1W2PR95 340 aa10.77□□□□□ -0.69
PTPRR-205ENST00000537619 FAM205CA6NFA0 338 aa10.77□□□□□ -0.69
PTPRR-205ENST00000537619 ZBTB22O15209 634 aa10.77□□□□□ -0.69
PTPRR-205ENST00000537619 DEXIO95424 95 aa10.77□□□□□ -0.69
PTPRR-205ENST00000537619 CAVIN2O95810 425 aa10.77□□□□□ -0.69
PTPRR-205ENST00000537619 LRMPQ12912 555 aa10.77□□□□□ -0.69
PTPRR-205ENST00000537619 GNL2Q13823 731 aaKnown RBP10.77□□□□□ -0.69
PTPRR-205ENST00000537619 TRIM29Q14134 588 aa10.77□□□□□ -0.69
PTPRR-205ENST00000537619 NOLC1Q14978 699 aaKnown RBP eCLIP10.77□□□□□ -0.69
PTPRR-205ENST00000537619 CCDC186Q7Z3E2 898 aa10.77□□□□□ -0.69
PTPRR-205ENST00000537619 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.76□□□□□ -0.69
PTPRR-205ENST00000537619 BIN1O00499 593 aa10.76□□□□□ -0.69
PTPRR-205ENST00000537619 ORC4O43929 436 aa10.76□□□□□ -0.69
PTPRR-205ENST00000537619 TROAPQ12815 778 aa10.76□□□□□ -0.69
PTPRR-205ENST00000537619 EARS2Q5JPH6 523 aaKnown RBP10.76□□□□□ -0.69
PTPRR-205ENST00000537619 FAM47AQ5JRC9 791 aa10.76□□□□□ -0.69
PTPRR-205ENST00000537619 MEX3CQ5U5Q3 659 aaKnown RBP10.76□□□□□ -0.69
PTPRR-205ENST00000537619 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.76□□□□□ -0.69
PTPRR-205ENST00000537619 TRIM22Q8IYM9 498 aa10.76□□□□□ -0.69
PTPRR-205ENST00000537619 CNBD1Q8NA66 436 aa10.76□□□□□ -0.69
PTPRR-205ENST00000537619 KIAA1524Q8TCG1 905 aa10.76□□□□□ -0.69
PTPRR-205ENST00000537619 WASF1Q92558 559 aa10.76□□□□□ -0.69
PTPRR-205ENST00000537619 CRNKL1Q9BZJ0 848 aaKnown RBP10.76□□□□□ -0.69
PTPRR-205ENST00000537619 MKRN1Q9UHC7 482 aaKnown RBP10.76□□□□□ -0.69
PTPRR-205ENST00000537619 CNTNAP5Q8WYK1 1306 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms