RNA–Protein interactions for RNA: ENST00000536803.1

IGHMBP2-202, Transcript of immunoglobulin mu DNA binding protein 2, humanhuman

TSL 3

Gene IGHMBP2, Length 444 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHMBP2-202ENST00000536803 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.52■■□□□ 1.04
IGHMBP2-202ENST00000536803 PABPC4Q13310 644 aaKnown RBP eCLIP21.51■■□□□ 1.03
IGHMBP2-202ENST00000536803 TREML2Q5T2D2 321 aa21.51■■□□□ 1.03
IGHMBP2-202ENST00000536803 CCDC84Q86UT8 332 aaPredicted RBP21.51■■□□□ 1.03
IGHMBP2-202ENST00000536803 ZNF384Q8TF68 577 aa21.51■■□□□ 1.03
IGHMBP2-202ENST00000536803 TAOK2Q9UL54 1235 aa21.51■■□□□ 1.03
IGHMBP2-202ENST00000536803 A0A1W2PPC1 479 aa21.5■■□□□ 1.03
IGHMBP2-202ENST00000536803 EVI5O60447 810 aa21.5■■□□□ 1.03
IGHMBP2-202ENST00000536803 GCLCP48506 637 aaPredicted RBP21.5■■□□□ 1.03
IGHMBP2-202ENST00000536803 GORABQ5T7V8 394 aa21.5■■□□□ 1.03
IGHMBP2-202ENST00000536803 SPATA5Q8NB90 893 aa21.5■■□□□ 1.03
IGHMBP2-202ENST00000536803 ZNF280CQ8ND82 737 aa21.5■■□□□ 1.03
IGHMBP2-202ENST00000536803 ARHGAP45Q92619 1136 aa21.5■■□□□ 1.03
IGHMBP2-202ENST00000536803 NSUN4Q96CB9 384 aaKnown RBP21.5■■□□□ 1.03
IGHMBP2-202ENST00000536803 NEUROD6Q96NK8 337 aa21.5■■□□□ 1.03
IGHMBP2-202ENST00000536803 HMG20BQ9P0W2 317 aa21.5■■□□□ 1.03
IGHMBP2-202ENST00000536803 LOC285556D6RIA3 1793 aa21.5■■□□□ 1.03
IGHMBP2-202ENST00000536803 FAM196BA6NMK8 535 aa21.49■■□□□ 1.03
IGHMBP2-202ENST00000536803 SPP2Q13103 211 aa21.49■■□□□ 1.03
IGHMBP2-202ENST00000536803 CRISPLD2Q9H0B8 497 aa21.49■■□□□ 1.03
IGHMBP2-202ENST00000536803 RAI14Q9P0K7 980 aa21.48■■□□□ 1.03
IGHMBP2-202ENST00000536803 USP17L5A8MUK1 530 aa21.47■■□□□ 1.03
IGHMBP2-202ENST00000536803 ARID4AP29374 1257 aaPredicted RBP21.47■■□□□ 1.03
IGHMBP2-202ENST00000536803 CAP2P40123 477 aa21.47■■□□□ 1.03
IGHMBP2-202ENST00000536803 RARSP54136 660 aaKnown RBP21.47■■□□□ 1.03
IGHMBP2-202ENST00000536803 HMGCS2P54868 508 aa21.47■■□□□ 1.03
IGHMBP2-202ENST00000536803 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.47■■□□□ 1.03
IGHMBP2-202ENST00000536803 AS3MTQ9HBK9 375 aa21.47■■□□□ 1.03
IGHMBP2-202ENST00000536803 HERC5Q9UII4 1024 aaKnown RBP21.47■■□□□ 1.03
IGHMBP2-202ENST00000536803 ATAD5Q96QE3 1844 aa21.47■■□□□ 1.03
IGHMBP2-202ENST00000536803 HMGCRP04035 888 aa21.46■■□□□ 1.03
IGHMBP2-202ENST00000536803 PI16Q6UXB8 463 aa21.46■■□□□ 1.03
IGHMBP2-202ENST00000536803 TBC1D9Q6ZT07 1266 aa21.46■■□□□ 1.03
IGHMBP2-202ENST00000536803 TEX11Q8IYF3 940 aa21.46■■□□□ 1.03
IGHMBP2-202ENST00000536803 ANKLE1Q8NAG6 615 aa21.46■■□□□ 1.03
IGHMBP2-202ENST00000536803 NOL10Q9BSC4 688 aaKnown RBP21.46■■□□□ 1.03
IGHMBP2-202ENST00000536803 DOCK3Q8IZD9 2030 aa21.46■■□□□ 1.03
IGHMBP2-202ENST00000536803 SH3D19Q5HYK7 790 aa21.45■■□□□ 1.02
IGHMBP2-202ENST00000536803 NECAB2Q7Z6G3 386 aa21.45■■□□□ 1.02
IGHMBP2-202ENST00000536803 PAWRQ96IZ0 340 aaKnown RBP21.45■■□□□ 1.02
IGHMBP2-202ENST00000536803 ASCC2Q9H1I8 757 aaPredicted RBP21.45■■□□□ 1.02
IGHMBP2-202ENST00000536803 LRP2BPQ9P2M1 347 aa21.45■■□□□ 1.02
IGHMBP2-202ENST00000536803 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.45■■□□□ 1.02
IGHMBP2-202ENST00000536803 UQCRFS1P1P0C7P4 283 aa21.44■■□□□ 1.02
IGHMBP2-202ENST00000536803 DHX36Q9H2U1 1008 aaKnown RBP21.44■■□□□ 1.02
IGHMBP2-202ENST00000536803 PI4KBQ9UBF8 816 aa21.44■■□□□ 1.02
IGHMBP2-202ENST00000536803 GNAI2P04899 355 aa21.43■■□□□ 1.02
IGHMBP2-202ENST00000536803 MCAMP43121 646 aa21.43■■□□□ 1.02
IGHMBP2-202ENST00000536803 G3BP1Q13283 466 aaKnown RBP eCLIP21.43■■□□□ 1.02
IGHMBP2-202ENST00000536803 MORF4L1Q9UBU8 362 aa21.43■■□□□ 1.02
IGHMBP2-202ENST00000536803 IPO8O15397 1037 aaKnown RBP21.42■■□□□ 1.02
IGHMBP2-202ENST00000536803 BAG3O95817 575 aa21.42■■□□□ 1.02
IGHMBP2-202ENST00000536803 PLCG2P16885 1265 aa21.42■■□□□ 1.02
IGHMBP2-202ENST00000536803 RRP1BQ14684 758 aaKnown RBP21.42■■□□□ 1.02
IGHMBP2-202ENST00000536803 RPTORQ8N122 1335 aa21.42■■□□□ 1.02
IGHMBP2-202ENST00000536803 WDR18Q9BV38 432 aa21.42■■□□□ 1.02
IGHMBP2-202ENST00000536803 HMX1Q9NP08 348 aaPredicted RBP21.42■■□□□ 1.02
IGHMBP2-202ENST00000536803 GJD2Q9UKL4 321 aa21.42■■□□□ 1.02
IGHMBP2-202ENST00000536803 ASNSP08243 561 aa21.41■■□□□ 1.02
IGHMBP2-202ENST00000536803 IRX3P78415 501 aaPredicted RBP21.41■■□□□ 1.02
IGHMBP2-202ENST00000536803 SH3RF3Q8TEJ3 882 aaPredicted RBP21.41■■□□□ 1.02
IGHMBP2-202ENST00000536803 DIS3LQ8TF46 1054 aaKnown RBP21.41■■□□□ 1.02
IGHMBP2-202ENST00000536803 TMOD4Q9NZQ9 345 aa21.41■■□□□ 1.02
IGHMBP2-202ENST00000536803 MAST2Q6P0Q8 1798 aa21.41■■□□□ 1.02
IGHMBP2-202ENST00000536803 ALPK3Q96L96 1907 aa21.4■■□□□ 1.02
IGHMBP2-202ENST00000536803 BACE1P56817 501 aa21.4■■□□□ 1.02
IGHMBP2-202ENST00000536803 MTMR2Q13614 643 aa21.4■■□□□ 1.02
IGHMBP2-202ENST00000536803 NAA16Q6N069 864 aaPredicted RBP21.4■■□□□ 1.02
IGHMBP2-202ENST00000536803 STAP2Q9UGK3 403 aa21.4■■□□□ 1.02
IGHMBP2-202ENST00000536803 HOXA7P31268 230 aaPredicted RBP21.39■■□□□ 1.01
IGHMBP2-202ENST00000536803 NBPF3Q9H094 633 aa21.39■■□□□ 1.01
IGHMBP2-202ENST00000536803 GINM1Q9NU53 330 aa21.39■■□□□ 1.01
IGHMBP2-202ENST00000536803 AATFQ9NY61 560 aaKnown RBP eCLIP21.39■■□□□ 1.01
IGHMBP2-202ENST00000536803 SIPA1L1O43166 1804 aa21.39■■□□□ 1.01
IGHMBP2-202ENST00000536803 PNMA6EA0A0J9YXQ4 647 aa21.38■■□□□ 1.01
IGHMBP2-202ENST00000536803 C19orf81C9J6K1 198 aa21.38■■□□□ 1.01
IGHMBP2-202ENST00000536803 IGSF3O75054 1194 aa21.38■■□□□ 1.01
IGHMBP2-202ENST00000536803 TRIM27P14373 513 aa21.38■■□□□ 1.01
IGHMBP2-202ENST00000536803 PPP4CP60510 307 aa21.38■■□□□ 1.01
IGHMBP2-202ENST00000536803 SOCS4Q8WXH5 440 aa21.38■■□□□ 1.01
IGHMBP2-202ENST00000536803 TRIM34Q9BYJ4 488 aa21.38■■□□□ 1.01
IGHMBP2-202ENST00000536803 GPR108Q9NPR9 543 aa21.38■■□□□ 1.01
IGHMBP2-202ENST00000536803 LAMA3Q16787 3333 aa21.37■■□□□ 1.01
IGHMBP2-202ENST00000536803 FLT1P17948 1338 aa21.37■■□□□ 1.01
IGHMBP2-202ENST00000536803 BMP8BP34820 402 aa21.37■■□□□ 1.01
IGHMBP2-202ENST00000536803 TRIM32Q13049 653 aa21.37■■□□□ 1.01
IGHMBP2-202ENST00000536803 CCDC158Q5M9N0 1113 aa21.37■■□□□ 1.01
IGHMBP2-202ENST00000536803 TTC39AQ5SRH9 613 aa21.37■■□□□ 1.01
IGHMBP2-202ENST00000536803 ATF7IPQ6VMQ6 1270 aa21.37■■□□□ 1.01
IGHMBP2-202ENST00000536803 METTL16Q86W50 562 aaKnown RBP21.37■■□□□ 1.01
IGHMBP2-202ENST00000536803 FOXP4Q8IVH2 680 aaPredicted RBP21.37■■□□□ 1.01
IGHMBP2-202ENST00000536803 C7orf61Q8IZ16 206 aa21.37■■□□□ 1.01
IGHMBP2-202ENST00000536803 CRACR2BQ8N4Y2 399 aaPredicted RBP21.37■■□□□ 1.01
IGHMBP2-202ENST00000536803 GPRC5AQ8NFJ5 357 aa21.37■■□□□ 1.01
IGHMBP2-202ENST00000536803 TGFBRAP1Q8WUH2 860 aa21.37■■□□□ 1.01
IGHMBP2-202ENST00000536803 TRIB2Q92519 343 aa21.37■■□□□ 1.01
IGHMBP2-202ENST00000536803 PLXNB2O15031 1838 aa21.36■■□□□ 1.01
IGHMBP2-202ENST00000536803 SOX1O00570 391 aaPredicted RBP21.36■■□□□ 1.01
IGHMBP2-202ENST00000536803 XRCC5P13010 732 aaKnown RBP21.36■■□□□ 1.01
IGHMBP2-202ENST00000536803 HERVK_113P62684 666 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms