RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 GMLQ99445 158 aa15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 LRRC2Q9BYS8 371 aa15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 MINDY4BA8MYZ0 360 aa15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 BAG3O95817 575 aa15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 USP17L8P0C7I0 530 aa15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 USP5P45974 858 aa15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 RBM5P52756 815 aaKnown RBP eCLIP15.18■□□□□ 0.029e-32■■■■□ 20.3
CDK5RAP3-202ENST00000536708 UVSSAQ2YD98 709 aa15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 CCDC183Q5T5S1 534 aa15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 APOBEC3HQ6NTF7 200 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 CTR9Q6PD62 1173 aa15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 TMED8Q6PL24 325 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 GDPD2Q9HCC8 539 aa15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 MKRN1Q9UHC7 482 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 SAP30BPQ9UHR5 308 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 NOL7Q9UMY1 257 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 FLT1P17948 1338 aa15.18■□□□□ 0.02
CDK5RAP3-202ENST00000536708 USP17L12C9JPN9 530 aa15.17■□□□□ 0.02
CDK5RAP3-202ENST00000536708 USP17L21D6R901 530 aa15.17■□□□□ 0.02
CDK5RAP3-202ENST00000536708 RPS6KB1P23443 525 aa15.17■□□□□ 0.02
CDK5RAP3-202ENST00000536708 PPARAQ07869 468 aa15.17■□□□□ 0.02
CDK5RAP3-202ENST00000536708 PICALMQ13492 652 aa15.17■□□□□ 0.02
CDK5RAP3-202ENST00000536708 BLOC1S2Q6QNY1 142 aa15.17■□□□□ 0.02
CDK5RAP3-202ENST00000536708 SLF2Q8IX21 1173 aa15.17■□□□□ 0.02
CDK5RAP3-202ENST00000536708 FAM184AQ8NB25 1140 aa15.17■□□□□ 0.02
CDK5RAP3-202ENST00000536708 NEK1Q96PY6 1258 aa15.17■□□□□ 0.02
CDK5RAP3-202ENST00000536708 TPCN1Q9ULQ1 816 aa15.17■□□□□ 0.02
CDK5RAP3-202ENST00000536708 CNPY2Q9Y2B0 182 aa15.17■□□□□ 0.02
CDK5RAP3-202ENST00000536708 OFD1O75665 1012 aa15.16■□□□□ 0.02
CDK5RAP3-202ENST00000536708 KRT32Q14532 448 aa15.16■□□□□ 0.02
CDK5RAP3-202ENST00000536708 CIAPIN1Q6FI81 312 aa15.16■□□□□ 0.02
CDK5RAP3-202ENST00000536708 CDC42EP5Q6NZY7 148 aa15.16■□□□□ 0.02
CDK5RAP3-202ENST00000536708 HHIPL2Q6UWX4 724 aa15.16■□□□□ 0.02
CDK5RAP3-202ENST00000536708 DDX4Q9NQI0 724 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-202ENST00000536708 MCM9Q9NXL9 1143 aa15.16■□□□□ 0.02
CDK5RAP3-202ENST00000536708 IGSF3O75054 1194 aa15.16■□□□□ 0.02
CDK5RAP3-202ENST00000536708 WDHD1O75717 1129 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-202ENST00000536708 MCM5P33992 734 aa15.16■□□□□ 0.02
CDK5RAP3-202ENST00000536708 NFIAQ12857 509 aa15.16■□□□□ 0.02
CDK5RAP3-202ENST00000536708 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-202ENST00000536708 PKNOX2Q96KN3 472 aa15.16■□□□□ 0.02
CDK5RAP3-202ENST00000536708 ZDHHC15Q96MV8 337 aa15.16■□□□□ 0.02
CDK5RAP3-202ENST00000536708 B4E1Z4 1266 aa15.15■□□□□ 0.02
CDK5RAP3-202ENST00000536708 FZD9O00144 591 aa15.15■□□□□ 0.02
CDK5RAP3-202ENST00000536708 CFAP100Q494V2 611 aa15.15■□□□□ 0.02
CDK5RAP3-202ENST00000536708 GPHNQ9NQX3 736 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-202ENST00000536708 ATP8A2Q9NTI2 1148 aa15.15■□□□□ 0.02
CDK5RAP3-202ENST00000536708 GJA3Q9Y6H8 435 aa15.15■□□□□ 0.02
CDK5RAP3-202ENST00000536708 MYO3BQ8WXR4 1341 aa15.15■□□□□ 0.02
CDK5RAP3-202ENST00000536708 ZNF500O60304 480 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-202ENST00000536708 PRDM1O75626 825 aa15.15■□□□□ 0.02
CDK5RAP3-202ENST00000536708 EGFRP00533 1210 aa15.15■□□□□ 0.02
CDK5RAP3-202ENST00000536708 LMNB1P20700 586 aa15.15■□□□□ 0.02
CDK5RAP3-202ENST00000536708 PDCP20941 246 aa15.15■□□□□ 0.02
CDK5RAP3-202ENST00000536708 MSNP26038 577 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-202ENST00000536708 ANTXR2P58335 489 aa15.15■□□□□ 0.02
CDK5RAP3-202ENST00000536708 MB21D2Q8IYB1 491 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-202ENST00000536708 USP40Q9NVE5 1235 aa15.15■□□□□ 0.02
CDK5RAP3-202ENST00000536708 SERPINA10Q9UK55 444 aa15.15■□□□□ 0.02
CDK5RAP3-202ENST00000536708 DTNBO60941 627 aa15.14■□□□□ 0.01
CDK5RAP3-202ENST00000536708 TOB2Q14106 344 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-202ENST00000536708 FOXD4L6Q3SYB3 417 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-202ENST00000536708 RRP12Q5JTH9 1297 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-202ENST00000536708 GIMAP6Q6P9H5 292 aa15.14■□□□□ 0.01
CDK5RAP3-202ENST00000536708 FOXD4L3Q6VB84 417 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-202ENST00000536708 PRMT6Q96LA8 375 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-202ENST00000536708 ARPP21Q9UBL0 812 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-202ENST00000536708 TCHHQ07283 1943 aa15.14■□□□□ 0.01
CDK5RAP3-202ENST00000536708 PLCG2P16885 1265 aa15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 GMPSP49915 693 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 AKNAD1Q5T1N1 836 aa15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 CYB5R4Q7L1T6 521 aa15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 SLC44A5Q8NCS7 719 aa15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 DYNLL2Q96FJ2 89 aa15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 TDRD3Q9H7E2 651 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 TOMM22Q9NS69 142 aa15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 RNF181Q9P0P0 153 aa15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 PLCD1P51178 756 aa15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 TERF1P54274 439 aa15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 HDLBPQ00341 1268 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 RALYLQ86SE5 291 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 ZFPM1Q8IX07 1006 aa15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 NECAB1Q8N987 351 aa15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 AGBL3Q8NEM8 1001 aa15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 NCOA7Q8NI08 942 aa15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 STAG1Q8WVM7 1258 aa15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 CCDC39Q9UFE4 941 aa15.13■□□□□ 0.01
CDK5RAP3-202ENST00000536708 CLRN2A0PK11 232 aa15.12■□□□□ 0.01
CDK5RAP3-202ENST00000536708 SPDYE2BA6NHP3 402 aa15.12■□□□□ 0.01
CDK5RAP3-202ENST00000536708 KDM4AO75164 1064 aa15.12■□□□□ 0.01
CDK5RAP3-202ENST00000536708 SPDYE6P0CI01 402 aa15.12■□□□□ 0.01
CDK5RAP3-202ENST00000536708 SLURP2P0DP57 97 aa15.12■□□□□ 0.01
CDK5RAP3-202ENST00000536708 EIF6P56537 245 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-202ENST00000536708 LARP1BQ659C4 914 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-202ENST00000536708 Q6ZUG5 572 aa15.12■□□□□ 0.01
CDK5RAP3-202ENST00000536708 ANAPC4Q9UJX5 808 aa15.12■□□□□ 0.01
CDK5RAP3-202ENST00000536708 ROBO3Q96MS0 1386 aa15.12■□□□□ 0.01
CDK5RAP3-202ENST00000536708 ELP1O95163 1332 aa15.11■□□□□ 0.01
CDK5RAP3-202ENST00000536708 PRC1O43663 620 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms