RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 TMTC2Q8N394 836 aa15.16■□□□□ 0.02
LDLR-203ENST00000535915 NUP133Q8WUM0 1156 aa15.16■□□□□ 0.02
LDLR-203ENST00000535915 SDR42E1Q8WUS8 393 aa15.16■□□□□ 0.02
LDLR-203ENST00000535915 RAI14Q9P0K7 980 aa15.16■□□□□ 0.02
LDLR-203ENST00000535915 TUBE1Q9UJT0 475 aa15.16■□□□□ 0.02
LDLR-203ENST00000535915 ZNF652Q9Y2D9 606 aa15.16■□□□□ 0.02
LDLR-203ENST00000535915 USP27XA6NNY8 438 aa15.16■□□□□ 0.02
LDLR-203ENST00000535915 NCAPHQ15003 741 aa15.16■□□□□ 0.02
LDLR-203ENST00000535915 TMC6Q7Z403 805 aa15.16■□□□□ 0.02
LDLR-203ENST00000535915 UBAC1Q9BSL1 405 aa15.16■□□□□ 0.02
LDLR-203ENST00000535915 PAXBP1Q9Y5B6 917 aa15.16■□□□□ 0.02
LDLR-203ENST00000535915 FAM237AA0A1B0GTK4 181 aa15.15■□□□□ 0.02
LDLR-203ENST00000535915 CCDC196A0A1B0GTZ2 297 aa15.15■□□□□ 0.02
LDLR-203ENST00000535915 LMOD1P29536 600 aaPredicted RBP15.15■□□□□ 0.02
LDLR-203ENST00000535915 GYG1P46976 350 aa15.15■□□□□ 0.02
LDLR-203ENST00000535915 CEP135Q66GS9 1140 aa15.15■□□□□ 0.02
LDLR-203ENST00000535915 ZNF592Q92610 1267 aa15.15■□□□□ 0.02
LDLR-203ENST00000535915 OSBPL5Q9H0X9 879 aaPredicted RBP15.15■□□□□ 0.02
LDLR-203ENST00000535915 KCNH3Q9ULD8 1083 aa15.15■□□□□ 0.02
LDLR-203ENST00000535915 BCL9LQ86UU0 1499 aa15.15■□□□□ 0.02
LDLR-203ENST00000535915 MAGEB6P1A0A0J9YX57 407 aa15.15■□□□□ 0.02
LDLR-203ENST00000535915 IKBKBO14920 756 aa15.15■□□□□ 0.02
LDLR-203ENST00000535915 CTIFO43310 598 aaKnown RBP15.15■□□□□ 0.02
LDLR-203ENST00000535915 DEXIO95424 95 aa15.15■□□□□ 0.02
LDLR-203ENST00000535915 ZNF654Q8IZM8 581 aa15.15■□□□□ 0.02
LDLR-203ENST00000535915 KRI1Q8N9T8 703 aaKnown RBP15.15■□□□□ 0.02
LDLR-203ENST00000535915 CNNM3Q8NE01 707 aa15.15■□□□□ 0.02
LDLR-203ENST00000535915 GNL3LQ9NVN8 582 aaKnown RBP15.15■□□□□ 0.02
LDLR-203ENST00000535915 LONRF3Q496Y0 759 aa15.14■□□□□ 0.01
LDLR-203ENST00000535915 ANKRD18AQ8IVF6 992 aa15.14■□□□□ 0.01
LDLR-203ENST00000535915 CRACR2BQ8N4Y2 399 aaPredicted RBP15.14■□□□□ 0.01
LDLR-203ENST00000535915 FANCBQ8NB91 859 aa15.14■□□□□ 0.01
LDLR-203ENST00000535915 TRMT1Q9NXH9 659 aaKnown RBP15.14■□□□□ 0.01
LDLR-203ENST00000535915 COL5A3P25940 1745 aaPredicted RBP15.14■□□□□ 0.01
LDLR-203ENST00000535915 CICQ96RK0 1608 aaPredicted RBP15.14■□□□□ 0.01
LDLR-203ENST00000535915 PTPN14Q15678 1187 aa15.14■□□□□ 0.01
LDLR-203ENST00000535915 SPECC1Q5M775 1068 aa15.14■□□□□ 0.01
LDLR-203ENST00000535915 KRBA2Q6ZNG9 492 aa15.14■□□□□ 0.01
LDLR-203ENST00000535915 MTA3Q9BTC8 594 aa15.14■□□□□ 0.01
LDLR-203ENST00000535915 MYH13Q9UKX3 1938 aa15.14■□□□□ 0.01
LDLR-203ENST00000535915 TOB1P50616 345 aaPredicted RBP15.13■□□□□ 0.01
LDLR-203ENST00000535915 ERFEQ4G0M1 354 aa15.13■□□□□ 0.01
LDLR-203ENST00000535915 METTL16Q86W50 562 aaKnown RBP15.13■□□□□ 0.01
LDLR-203ENST00000535915 CCDC112Q8NEF3 446 aa15.13■□□□□ 0.01
LDLR-203ENST00000535915 ESR2Q92731 530 aa15.13■□□□□ 0.01
LDLR-203ENST00000535915 FOXP1Q9H334 677 aaPredicted RBP15.13■□□□□ 0.01
LDLR-203ENST00000535915 CACNA1SQ13698 1873 aa15.13■□□□□ 0.01
LDLR-203ENST00000535915 WTIPA6NIX2 430 aaPredicted RBP15.13■□□□□ 0.01
LDLR-203ENST00000535915 FANCCQ00597 558 aa15.13■□□□□ 0.01
LDLR-203ENST00000535915 RILPL1Q5EBL4 403 aa15.13■□□□□ 0.01
LDLR-203ENST00000535915 ZNF804BA4D1E1 1349 aa15.13■□□□□ 0.01
LDLR-203ENST00000535915 OLFM4Q6UX06 510 aa15.13■□□□□ 0.01
LDLR-203ENST00000535915 CCAR2Q8N163 923 aaKnown RBP15.13■□□□□ 0.01
LDLR-203ENST00000535915 CCDC150Q8NCX0 1101 aa15.13■□□□□ 0.01
LDLR-203ENST00000535915 TNKSO95271 1327 aa15.13■□□□□ 0.01
LDLR-203ENST00000535915 KCNQ2O43526 872 aa15.12■□□□□ 0.01
LDLR-203ENST00000535915 ATP1A3P13637 1013 aa15.12■□□□□ 0.01
LDLR-203ENST00000535915 MYL5Q02045 173 aa15.12■□□□□ 0.01
LDLR-203ENST00000535915 NR5A1Q13285 461 aa15.12■□□□□ 0.01
LDLR-203ENST00000535915 CAVIN4Q5BKX8 364 aa15.12■□□□□ 0.01
LDLR-203ENST00000535915 SFPQP23246 707 aaKnown RBP eCLIP15.12■□□□□ 0.01
LDLR-203ENST00000535915 RCAN1P53805 252 aa15.12■□□□□ 0.01
LDLR-203ENST00000535915 UBE4AQ14139 1066 aa15.12■□□□□ 0.01
LDLR-203ENST00000535915 NYAP1Q6ZVC0 841 aa15.12■□□□□ 0.01
LDLR-203ENST00000535915 C3orf67Q6ZVT6 689 aa15.12■□□□□ 0.01
LDLR-203ENST00000535915 SMARCC1Q92922 1105 aaPredicted RBP15.12■□□□□ 0.01
LDLR-203ENST00000535915 CCDC94Q9BW85 323 aaPredicted RBP15.12■□□□□ 0.01
LDLR-203ENST00000535915 HSD3B7Q9H2F3 369 aa15.12■□□□□ 0.01
LDLR-203ENST00000535915 ANAPC4Q9UJX5 808 aa15.12■□□□□ 0.01
LDLR-203ENST00000535915 PCDHA5Q9Y5H7 936 aa15.12■□□□□ 0.01
LDLR-203ENST00000535915 COL1A1P02452 1464 aaPredicted RBP15.11■□□□□ 0.01
LDLR-203ENST00000535915 SMIM22K7EJ46 135 aa15.11■□□□□ 0.01
LDLR-203ENST00000535915 ATP2B1P20020 1258 aa15.11■□□□□ 0.01
LDLR-203ENST00000535915 ARMCX5Q6P1M9 558 aa15.11■□□□□ 0.01
LDLR-203ENST00000535915 CLEC4GQ6UXB4 293 aa15.11■□□□□ 0.01
LDLR-203ENST00000535915 AEBP2Q6ZN18 517 aaPredicted RBP15.11■□□□□ 0.01
LDLR-203ENST00000535915 HOOK1Q9UJC3 728 aaKnown RBP15.11■□□□□ 0.01
LDLR-203ENST00000535915 SERPINC1P01008 464 aa15.11■□□□□ 0.01
LDLR-203ENST00000535915 DYNLL1P63167 89 aaKnown RBP15.11■□□□□ 0.01
LDLR-203ENST00000535915 AKAP17AQ02040 695 aaKnown RBP15.11■□□□□ 0.01
LDLR-203ENST00000535915 GRIN1Q05586 938 aa15.11■□□□□ 0.01
LDLR-203ENST00000535915 SEC23AQ15436 765 aa15.11■□□□□ 0.01
LDLR-203ENST00000535915 BICDL1Q6ZP65 573 aa15.11■□□□□ 0.01
LDLR-203ENST00000535915 FOXP4Q8IVH2 680 aaPredicted RBP15.11■□□□□ 0.01
LDLR-203ENST00000535915 PDCL2Q8N4E4 241 aa15.11■□□□□ 0.01
LDLR-203ENST00000535915 ANKRD7Q92527 254 aa15.11■□□□□ 0.01
LDLR-203ENST00000535915 RIOK1Q9BRS2 568 aaKnown RBP15.11■□□□□ 0.01
LDLR-203ENST00000535915 BSDC1Q9NW68 430 aaPredicted RBP15.11■□□□□ 0.01
LDLR-203ENST00000535915 FBXO2Q9UK22 296 aaPredicted RBP15.11■□□□□ 0.01
LDLR-203ENST00000535915 PCDHB6Q9Y5E3 794 aa15.11■□□□□ 0.01
LDLR-203ENST00000535915 SCN7AQ01118 1682 aa15.11■□□□□ 0.01
LDLR-203ENST00000535915 SPATA31A5Q5VU36 1347 aa15.1■□□□□ 0.01
LDLR-203ENST00000535915 SPATA31A7Q8IWB4 1347 aa15.1■□□□□ 0.01
LDLR-203ENST00000535915 NUTM2BA6NNL0 878 aaPredicted RBP15.1■□□□□ 0.01
LDLR-203ENST00000535915 NUTM2EB1AL46 878 aaPredicted RBP15.1■□□□□ 0.01
LDLR-203ENST00000535915 FOXN1O15353 648 aa15.1■□□□□ 0.01
LDLR-203ENST00000535915 PTPREP23469 700 aa15.1■□□□□ 0.01
LDLR-203ENST00000535915 GTF2E1P29083 439 aaPredicted RBP15.1■□□□□ 0.01
LDLR-203ENST00000535915 UBASH3AP57075 661 aa15.1■□□□□ 0.01
LDLR-203ENST00000535915 NUTM2AQ8IVF1 878 aaPredicted RBP15.1■□□□□ 0.01
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