RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 GPR108Q9NPR9 543 aa25.31■■□□□ 1.64
LTBR-205ENST00000535739 GABRQQ9UN88 632 aa25.31■■□□□ 1.64
LTBR-205ENST00000535739 COL2A1P02458 1487 aaPredicted RBP25.31■■□□□ 1.64
LTBR-205ENST00000535739 MAST2Q6P0Q8 1798 aa25.31■■□□□ 1.64
LTBR-205ENST00000535739 HNRNPUQ00839 825 aaKnown RBP eCLIP25.3■■□□□ 1.64
LTBR-205ENST00000535739 SIPA1L1O43166 1804 aa25.29■■□□□ 1.64
LTBR-205ENST00000535739 SURF6O75683 361 aaKnown RBP25.29■■□□□ 1.64
LTBR-205ENST00000535739 RRP1BQ14684 758 aaKnown RBP25.29■■□□□ 1.64
LTBR-205ENST00000535739 CCDC158Q5M9N0 1113 aa25.29■■□□□ 1.64
LTBR-205ENST00000535739 NAA16Q6N069 864 aaPredicted RBP25.29■■□□□ 1.64
LTBR-205ENST00000535739 SMCR8Q8TEV9 937 aaPredicted RBP25.29■■□□□ 1.64
LTBR-205ENST00000535739 AGTPBP1Q9UPW5 1226 aa25.29■■□□□ 1.64
LTBR-205ENST00000535739 HABP4Q5JVS0 413 aaKnown RBP25.28■■□□□ 1.64
LTBR-205ENST00000535739 TREML2Q5T2D2 321 aa25.28■■□□□ 1.64
LTBR-205ENST00000535739 FTSJ3Q8IY81 847 aaKnown RBP25.28■■□□□ 1.64
LTBR-205ENST00000535739 SHISA4Q96DD7 197 aa25.28■■□□□ 1.64
LTBR-205ENST00000535739 NOL10Q9BSC4 688 aaKnown RBP25.28■■□□□ 1.64
LTBR-205ENST00000535739 AATFQ9NY61 560 aaKnown RBP eCLIP25.28■■□□□ 1.64
LTBR-205ENST00000535739 PCDH10Q9P2E7 1040 aa25.28■■□□□ 1.64
LTBR-205ENST00000535739 BIN2Q9UBW5 565 aaPredicted RBP25.28■■□□□ 1.64
LTBR-205ENST00000535739 LOC285556D6RIA3 1793 aa25.27■■□□□ 1.64
LTBR-205ENST00000535739 CYP2E1P05181 493 aaPredicted RBP25.27■■□□□ 1.64
LTBR-205ENST00000535739 RLBP1P12271 317 aa25.27■■□□□ 1.64
LTBR-205ENST00000535739 CCL5P13501 91 aa25.27■■□□□ 1.64
LTBR-205ENST00000535739 SPP2Q13103 211 aa25.27■■□□□ 1.64
LTBR-205ENST00000535739 ITPRIPQ8IWB1 547 aa25.27■■□□□ 1.64
LTBR-205ENST00000535739 FOCADQ5VW36 1801 aa25.27■■□□□ 1.64
LTBR-205ENST00000535739 CAP2P40123 477 aa25.26■■□□□ 1.63
LTBR-205ENST00000535739 ZBTB7BO15156 539 aaPredicted RBP25.25■■□□□ 1.63
LTBR-205ENST00000535739 BAG3O95817 575 aa25.25■■□□□ 1.63
LTBR-205ENST00000535739 ADGRA1Q86SQ6 560 aa25.25■■□□□ 1.63
LTBR-205ENST00000535739 ANKRD13CQ8N6S4 541 aa25.25■■□□□ 1.63
LTBR-205ENST00000535739 ZNF280CQ8ND82 737 aa25.25■■□□□ 1.63
LTBR-205ENST00000535739 RNF208Q9H0X6 261 aa25.25■■□□□ 1.63
LTBR-205ENST00000535739 TNPO2O14787 897 aaKnown RBP25.24■■□□□ 1.63
LTBR-205ENST00000535739 ZAP70P43403 619 aa25.24■■□□□ 1.63
LTBR-205ENST00000535739 FLT3LGP49771 235 aa25.24■■□□□ 1.63
LTBR-205ENST00000535739 PPP4CP60510 307 aa25.24■■□□□ 1.63
LTBR-205ENST00000535739 UBXN2AP68543 259 aa25.24■■□□□ 1.63
LTBR-205ENST00000535739 MAPKAPK5Q8IW41 473 aa25.24■■□□□ 1.63
LTBR-205ENST00000535739 PROCA1Q8NCQ7 364 aaPredicted RBP25.24■■□□□ 1.63
LTBR-205ENST00000535739 SLAIN1Q8ND83 568 aa25.24■■□□□ 1.63
LTBR-205ENST00000535739 TGFBRAP1Q8WUH2 860 aa25.24■■□□□ 1.63
LTBR-205ENST00000535739 TLR7Q9NYK1 1049 aaKnown RBP25.24■■□□□ 1.63
LTBR-205ENST00000535739 PI4KBQ9UBF8 816 aa25.24■■□□□ 1.63
LTBR-205ENST00000535739 HERC5Q9UII4 1024 aaKnown RBP25.24■■□□□ 1.63
LTBR-205ENST00000535739 DBNLQ9UJU6 430 aaKnown RBP25.24■■□□□ 1.63
LTBR-205ENST00000535739 NOP58Q9Y2X3 529 aaKnown RBP25.24■■□□□ 1.63
LTBR-205ENST00000535739 USP17L5A8MUK1 530 aa25.23■■□□□ 1.63
LTBR-205ENST00000535739 ADCY3O60266 1144 aa25.23■■□□□ 1.63
LTBR-205ENST00000535739 GJB1P08034 283 aa25.23■■□□□ 1.63
LTBR-205ENST00000535739 PLCG2P16885 1265 aa25.23■■□□□ 1.63
LTBR-205ENST00000535739 GJA8P48165 433 aa25.23■■□□□ 1.63
LTBR-205ENST00000535739 HMGCS2P54868 508 aa25.23■■□□□ 1.63
LTBR-205ENST00000535739 NKX2-3Q8TAU0 364 aa25.23■■□□□ 1.63
LTBR-205ENST00000535739 ZNF512BQ96KM6 892 aaPredicted RBP25.23■■□□□ 1.63
LTBR-205ENST00000535739 CCDC8Q9H0W5 538 aaPredicted RBP25.23■■□□□ 1.63
LTBR-205ENST00000535739 PIH1D3Q9NQM4 214 aaKnown RBP25.23■■□□□ 1.63
LTBR-205ENST00000535739 PNMA3Q9UL41 463 aa25.23■■□□□ 1.63
LTBR-205ENST00000535739 ELNP15502 786 aa25.22■■□□□ 1.63
LTBR-205ENST00000535739 TBC1D2Q9BYX2 928 aa25.22■■□□□ 1.63
LTBR-205ENST00000535739 DHX36Q9H2U1 1008 aaKnown RBP25.22■■□□□ 1.63
LTBR-205ENST00000535739 FLT1P17948 1338 aa25.21■■□□□ 1.63
LTBR-205ENST00000535739 EAF2Q96CJ1 260 aaPredicted RBP25.21■■□□□ 1.63
LTBR-205ENST00000535739 UNC93B1Q9H1C4 597 aa25.21■■□□□ 1.63
LTBR-205ENST00000535739 MYH1P12882 1939 aa25.2■■□□□ 1.62
LTBR-205ENST00000535739 FAM110CQ1W6H9 321 aa25.2■■□□□ 1.62
LTBR-205ENST00000535739 DNAJC18Q9H819 358 aa25.2■■□□□ 1.62
LTBR-205ENST00000535739 PALD1Q9ULE6 856 aa25.2■■□□□ 1.62
LTBR-205ENST00000535739 H0YGN5 161 aa25.19■■□□□ 1.62
LTBR-205ENST00000535739 DYNLL1P63167 89 aaKnown RBP25.19■■□□□ 1.62
LTBR-205ENST00000535739 JAG1P78504 1218 aa25.19■■□□□ 1.62
LTBR-205ENST00000535739 IRF5Q13568 498 aa25.19■■□□□ 1.62
LTBR-205ENST00000535739 SH3D19Q5HYK7 790 aa25.19■■□□□ 1.62
LTBR-205ENST00000535739 COA7Q96BR5 231 aa25.19■■□□□ 1.62
LTBR-205ENST00000535739 AS3MTQ9HBK9 375 aa25.19■■□□□ 1.62
LTBR-205ENST00000535739 TAOK2Q9UL54 1235 aa25.19■■□□□ 1.62
LTBR-205ENST00000535739 COLQQ9Y215 455 aaPredicted RBP25.19■■□□□ 1.62
LTBR-205ENST00000535739 TRIOBPQ9H2D6 2365 aa25.19■■□□□ 1.62
LTBR-205ENST00000535739 INHAP05111 366 aa25.18■■□□□ 1.62
LTBR-205ENST00000535739 PABPC4Q13310 644 aaKnown RBP eCLIP25.18■■□□□ 1.62
LTBR-205ENST00000535739 SHROOM1Q2M3G4 852 aaPredicted RBP25.18■■□□□ 1.62
LTBR-205ENST00000535739 CEP85Q6P2H3 762 aa25.18■■□□□ 1.62
LTBR-205ENST00000535739 PXYLP1Q8TE99 480 aa25.18■■□□□ 1.62
LTBR-205ENST00000535739 U2AF1L4Q8WU68 220 aaKnown RBP25.18■■□□□ 1.62
LTBR-205ENST00000535739 ASCC2Q9H1I8 757 aaPredicted RBP25.18■■□□□ 1.62
LTBR-205ENST00000535739 SAP30BPQ9UHR5 308 aaKnown RBP25.18■■□□□ 1.62
LTBR-205ENST00000535739 ASNSP08243 561 aa25.17■■□□□ 1.62
LTBR-205ENST00000535739 CYP7A1P22680 504 aa25.17■■□□□ 1.62
LTBR-205ENST00000535739 MTMR2Q13614 643 aa25.17■■□□□ 1.62
LTBR-205ENST00000535739 UBE2Q1Q7Z7E8 422 aa25.17■■□□□ 1.62
LTBR-205ENST00000535739 METTL16Q86W50 562 aaKnown RBP25.17■■□□□ 1.62
LTBR-205ENST00000535739 FOXP4Q8IVH2 680 aaPredicted RBP25.17■■□□□ 1.62
LTBR-205ENST00000535739 CRACR2BQ8N4Y2 399 aaPredicted RBP25.17■■□□□ 1.62
LTBR-205ENST00000535739 DPF3Q92784 378 aa25.17■■□□□ 1.62
LTBR-205ENST00000535739 WDR18Q9BV38 432 aa25.17■■□□□ 1.62
LTBR-205ENST00000535739 NDUFB9Q9Y6M9 179 aa25.17■■□□□ 1.62
LTBR-205ENST00000535739 IGSF3O75054 1194 aa25.16■■□□□ 1.62
LTBR-205ENST00000535739 IDH1O75874 414 aaKnown RBP25.16■■□□□ 1.62
LTBR-205ENST00000535739 GCLCP48506 637 aaPredicted RBP25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms