RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 LIMCH1Q9UPQ0 1083 aa10.42□□□□□ -0.74
SF3B2-216ENST00000534765 MPHOSPH10O00566 681 aaKnown RBP10.42□□□□□ -0.74
SF3B2-216ENST00000534765 ECM2O94769 699 aaPredicted RBP10.42□□□□□ -0.74
SF3B2-216ENST00000534765 SYT1P21579 422 aa10.42□□□□□ -0.74
SF3B2-216ENST00000534765 ST5P78524 1137 aa10.42□□□□□ -0.74
SF3B2-216ENST00000534765 EZH2Q15910 746 aaKnown RBP10.42□□□□□ -0.74
SF3B2-216ENST00000534765 DDX11Q96FC9 970 aa10.42□□□□□ -0.74
SF3B2-216ENST00000534765 NRBP1Q9UHY1 535 aa10.42□□□□□ -0.74
SF3B2-216ENST00000534765 NRDCO43847 1150 aa10.42□□□□□ -0.74
SF3B2-216ENST00000534765 PHACTR2O75167 634 aa10.42□□□□□ -0.74
SF3B2-216ENST00000534765 SERPINB2P05120 415 aa10.42□□□□□ -0.74
SF3B2-216ENST00000534765 MCCP23508 829 aa10.42□□□□□ -0.74
SF3B2-216ENST00000534765 OAS2P29728 719 aaKnown RBP10.42□□□□□ -0.74
SF3B2-216ENST00000534765 CYP2C19P33261 490 aa10.42□□□□□ -0.74
SF3B2-216ENST00000534765 IGHMBP2P38935 993 aaKnown RBP10.42□□□□□ -0.74
SF3B2-216ENST00000534765 RBM6P78332 1123 aaKnown RBP10.42□□□□□ -0.74
SF3B2-216ENST00000534765 APPBP2Q92624 585 aa10.42□□□□□ -0.74
SF3B2-216ENST00000534765 BRF1Q92994 677 aa10.42□□□□□ -0.74
SF3B2-216ENST00000534765 CALR3Q96L12 384 aaKnown RBP10.42□□□□□ -0.74
SF3B2-216ENST00000534765 TM6SF1Q9BZW5 370 aa10.42□□□□□ -0.74
SF3B2-216ENST00000534765 ZNF646O15015 1829 aaPredicted RBP10.41□□□□□ -0.74
SF3B2-216ENST00000534765 GSG1L2A8MUP6 293 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 BECN2A8MW95 431 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 TULP2O00295 520 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 SLU7O95391 586 aaKnown RBP10.41□□□□□ -0.74
SF3B2-216ENST00000534765 SLURP2P0DP57 97 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 RDXP35241 583 aaKnown RBP10.41□□□□□ -0.74
SF3B2-216ENST00000534765 GPSM2P81274 684 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 SARNPP82979 210 aaKnown RBP10.41□□□□□ -0.74
SF3B2-216ENST00000534765 NEK1Q96PY6 1258 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 CYP46A1Q9Y6A2 500 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 MYH2Q9UKX2 1941 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 BRCA2P51587 3418 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 NEBLO76041 1014 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 SEC31AO94979 1220 aaKnown RBP10.41□□□□□ -0.74
SF3B2-216ENST00000534765 RXRAP19793 462 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 GJB2P29033 226 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 UVSSAQ2YD98 709 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 ISM2Q6H9L7 571 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 LUZP1Q86V48 1076 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 SMARCE1Q969G3 411 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 DSCC1Q9BVC3 393 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 CLIP2Q9UDT6 1046 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 LRRC37AA6NMS7 1700 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 EPB41L2O43491 1005 aaKnown RBP10.41□□□□□ -0.74
SF3B2-216ENST00000534765 MBD4O95243 580 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 GUCY2CP25092 1073 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 EN1Q05925 392 aaPredicted RBP10.41□□□□□ -0.74
SF3B2-216ENST00000534765 ZRSR1Q15695 479 aaKnown RBP10.41□□□□□ -0.74
SF3B2-216ENST00000534765 CDC37L1Q7L3B6 337 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 MXD3Q9BW11 206 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 KCNQ5Q9NR82 932 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 POLLQ9UGP5 575 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 CNPY2Q9Y2B0 182 aa10.41□□□□□ -0.74
SF3B2-216ENST00000534765 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.41□□□□□ -0.74
SF3B2-216ENST00000534765 CCDC192P0DO97 292 aa10.4□□□□□ -0.74
SF3B2-216ENST00000534765 FOSBP53539 338 aa10.4□□□□□ -0.74
SF3B2-216ENST00000534765 CCT2P78371 535 aaKnown RBP10.4□□□□□ -0.74
SF3B2-216ENST00000534765 CRY2Q49AN0 593 aa10.4□□□□□ -0.74
SF3B2-216ENST00000534765 CLEC17AQ6ZS10 378 aa10.4□□□□□ -0.74
SF3B2-216ENST00000534765 FBXO33Q7Z6M2 555 aa10.4□□□□□ -0.74
SF3B2-216ENST00000534765 NLRP3Q96P20 1036 aa10.4□□□□□ -0.74
SF3B2-216ENST00000534765 PLCD4Q9BRC7 762 aa10.4□□□□□ -0.74
SF3B2-216ENST00000534765 RABEP2Q9H5N1 569 aa10.4□□□□□ -0.74
SF3B2-216ENST00000534765 ZSWIM4Q9H7M6 989 aa10.4□□□□□ -0.74
SF3B2-216ENST00000534765 HPS5Q9UPZ3 1129 aa10.4□□□□□ -0.74
SF3B2-216ENST00000534765 HIP1O00291 1037 aa10.4□□□□□ -0.74
SF3B2-216ENST00000534765 URI1O94763 535 aaPredicted RBP10.4□□□□□ -0.74
SF3B2-216ENST00000534765 SLC5A1P13866 664 aa10.4□□□□□ -0.74
SF3B2-216ENST00000534765 BLOC1S2Q6QNY1 142 aa10.4□□□□□ -0.74
SF3B2-216ENST00000534765 TPTE2Q6XPS3 522 aa10.4□□□□□ -0.74
SF3B2-216ENST00000534765 DEFB132Q7Z7B7 95 aa10.4□□□□□ -0.74
SF3B2-216ENST00000534765 MB21D2Q8IYB1 491 aaPredicted RBP10.4□□□□□ -0.74
SF3B2-216ENST00000534765 CNBD1Q8NA66 436 aa10.4□□□□□ -0.74
SF3B2-216ENST00000534765 PIK3R5Q8WYR1 880 aa10.4□□□□□ -0.74
SF3B2-216ENST00000534765 ABCF2Q9UG63 623 aa10.4□□□□□ -0.74
SF3B2-216ENST00000534765 KIAA1551Q9HCM1 1747 aa10.4□□□□□ -0.75
SF3B2-216ENST00000534765 SLX4Q8IY92 1834 aa10.4□□□□□ -0.75
SF3B2-216ENST00000534765 RIOK1Q9BRS2 568 aaKnown RBP10.39□□□□□ -0.75
SF3B2-216ENST00000534765 VPS18Q9P253 973 aa10.39□□□□□ -0.75
SF3B2-216ENST00000534765 SCN9AQ15858 1988 aa10.39□□□□□ -0.75
SF3B2-216ENST00000534765 MCM6Q14566 821 aa10.39□□□□□ -0.75
SF3B2-216ENST00000534765 CCDC102AQ96A19 550 aa10.39□□□□□ -0.75
SF3B2-216ENST00000534765 FTOQ9C0B1 505 aaKnown RBP eCLIP10.39□□□□□ -0.756e-6■□□□□ 8.1
SF3B2-216ENST00000534765 MTMR6Q9Y217 621 aa10.39□□□□□ -0.75
SF3B2-216ENST00000534765 FDPSP14324 419 aaKnown RBP10.39□□□□□ -0.75
SF3B2-216ENST00000534765 FERMT3Q86UX7 667 aa10.39□□□□□ -0.75
SF3B2-216ENST00000534765 MYL10Q9BUA6 226 aa10.39□□□□□ -0.75
SF3B2-216ENST00000534765 KCNF1Q9H3M0 494 aa10.39□□□□□ -0.75
SF3B2-216ENST00000534765 SPTLC3Q9NUV7 552 aa10.39□□□□□ -0.75
SF3B2-216ENST00000534765 ZKSCAN3Q9BRR0 538 aa10.39□□□□□ -0.75
SF3B2-216ENST00000534765 AGXT2Q9BYV1 514 aa10.39□□□□□ -0.75
SF3B2-216ENST00000534765 RAI14Q9P0K7 980 aa10.39□□□□□ -0.75
SF3B2-216ENST00000534765 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.39□□□□□ -0.75
SF3B2-216ENST00000534765 MYH15Q9Y2K3 1946 aa10.38□□□□□ -0.75
SF3B2-216ENST00000534765 FRMD3A2A2Y4 597 aa10.38□□□□□ -0.75
SF3B2-216ENST00000534765 NOP2P46087 812 aaKnown RBP10.38□□□□□ -0.75
SF3B2-216ENST00000534765 SATB1Q01826 763 aa10.38□□□□□ -0.75
SF3B2-216ENST00000534765 PCDHAC2Q9Y5I4 1007 aa10.38□□□□□ -0.75
SF3B2-216ENST00000534765 CYP2D6P10635 497 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms