RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 STAP2Q9UGK3 403 aa6.25□□□□□ -1.41
CKAP5-212ENST00000533413 COL15A1P39059 1388 aa6.25□□□□□ -1.41
CKAP5-212ENST00000533413 PTCD1O75127 700 aaKnown RBP6.24□□□□□ -1.41
CKAP5-212ENST00000533413 PDGFRBP09619 1106 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 KCNA2P16389 499 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 ATICP31939 592 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 AMHR2Q16671 573 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 LDLRAD1Q5T700 205 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 ZNF771Q7L3S4 317 aaPredicted RBP6.24□□□□□ -1.41
CKAP5-212ENST00000533413 RELL1Q8IUW5 271 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 UHMK1Q8TAS1 419 aaKnown RBP6.24□□□□□ -1.41
CKAP5-212ENST00000533413 FAM161BQ96MY7 647 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 RETREG1Q9H6L5 497 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 AVENQ9NQS1 362 aaPredicted RBP6.24□□□□□ -1.41
CKAP5-212ENST00000533413 ABCF2Q9UG63 623 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 RABL2BQ9UNT1 228 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 DLEC1Q9Y238 1755 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 SPDYE2BA6NHP3 402 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 SPDYE5A6NIY4 337 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 TRIM64CA6NLI5 447 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 F13A1P00488 732 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 UBTFL1P0CB47 393 aaPredicted RBP6.24□□□□□ -1.41
CKAP5-212ENST00000533413 SPDYE6P0CI01 402 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 CCDC192P0DO97 292 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 SYT1P21579 422 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 EIF4A1P60842 406 aaKnown RBP6.24□□□□□ -1.41
CKAP5-212ENST00000533413 SPDYE2Q495Y8 402 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 ZNF746Q6NUN9 644 aaPredicted RBP6.24□□□□□ -1.41
CKAP5-212ENST00000533413 INTS5Q6P9B9 1019 aaKnown RBP6.24□□□□□ -1.41
CKAP5-212ENST00000533413 CNTROBQ8N137 903 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 KIAA1958Q8N8K9 716 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 SPC24Q8NBT2 197 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 SVIPQ8NHG7 77 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 SNRNP27Q8WVK2 155 aaKnown RBP6.24□□□□□ -1.41
CKAP5-212ENST00000533413 NELL1Q92832 810 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 ZNF496Q96IT1 587 aaPredicted RBP6.24□□□□□ -1.41
CKAP5-212ENST00000533413 IL1RAPL2Q9NP60 686 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 BIN2Q9UBW5 565 aaPredicted RBP6.24□□□□□ -1.41
CKAP5-212ENST00000533413 AOX1Q06278 1338 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 PNMA6EA0A0J9YXQ4 647 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 GOLGA6L4A6NEF3 574 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 SURF6O75683 361 aaKnown RBP6.24□□□□□ -1.41
CKAP5-212ENST00000533413 PSMC1P62191 440 aaKnown RBP6.24□□□□□ -1.41
CKAP5-212ENST00000533413 SLC39A6Q13433 755 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 MUM1L1Q5H9M0 696 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 COL23A1Q86Y22 540 aaPredicted RBP6.24□□□□□ -1.41
CKAP5-212ENST00000533413 NUTM1Q86Y26 1132 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 DNAJC10Q8IXB1 793 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 MTMR14Q8NCE2 650 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 DUSP9Q99956 384 aaKnown RBP6.24□□□□□ -1.41
CKAP5-212ENST00000533413 ACBD3Q9H3P7 528 aa6.24□□□□□ -1.41
CKAP5-212ENST00000533413 LRRFIP2Q9Y608 721 aaKnown RBP6.24□□□□□ -1.41
CKAP5-212ENST00000533413 USP42Q9H9J4 1324 aaKnown RBP6.23□□□□□ -1.41
CKAP5-212ENST00000533413 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.23□□□□□ -1.41
CKAP5-212ENST00000533413 COQ9O75208 318 aa6.23□□□□□ -1.41
CKAP5-212ENST00000533413 MTA2O94776 668 aa6.23□□□□□ -1.41
CKAP5-212ENST00000533413 RFC4P35249 363 aa6.23□□□□□ -1.41
CKAP5-212ENST00000533413 AK2P54819 239 aa6.23□□□□□ -1.41
CKAP5-212ENST00000533413 GPSM2P81274 684 aa6.23□□□□□ -1.41
CKAP5-212ENST00000533413 WASHC5Q12768 1159 aa6.23□□□□□ -1.41
CKAP5-212ENST00000533413 SLFNL1Q499Z3 407 aa6.23□□□□□ -1.41
CKAP5-212ENST00000533413 RUFY2Q8WXA3 655 aa6.23□□□□□ -1.41
CKAP5-212ENST00000533413 ZBTB9Q96C00 473 aa6.23□□□□□ -1.41
CKAP5-212ENST00000533413 CASS4Q9NQ75 786 aa6.23□□□□□ -1.41
CKAP5-212ENST00000533413 SALL3Q9BXA9 1300 aa6.23□□□□□ -1.41
CKAP5-212ENST00000533413 VPS37CA5D8V6 355 aaPredicted RBP6.23□□□□□ -1.41
CKAP5-212ENST00000533413 FAM177BA6PVY3 158 aa6.23□□□□□ -1.41
CKAP5-212ENST00000533413 U2AF2P26368 475 aaKnown RBP eCLIP6.23□□□□□ -1.419e-7■□□□□ 8.3
CKAP5-212ENST00000533413 CASQ1P31415 396 aa6.23□□□□□ -1.41
CKAP5-212ENST00000533413 ANKRD13DQ6ZTN6 518 aa6.23□□□□□ -1.41
CKAP5-212ENST00000533413 JARID2Q92833 1246 aaPredicted RBP6.23□□□□□ -1.41
CKAP5-212ENST00000533413 ZSCAN31Q96LW9 406 aaPredicted RBP6.23□□□□□ -1.41
CKAP5-212ENST00000533413 SGIP1Q9BQI5 828 aa6.23□□□□□ -1.41
CKAP5-212ENST00000533413 LARP6Q9BRS8 491 aaKnown RBP6.23□□□□□ -1.41
CKAP5-212ENST00000533413 SNX14Q9Y5W7 946 aa6.23□□□□□ -1.41
CKAP5-212ENST00000533413 ARFGEF2Q9Y6D5 1785 aa6.23□□□□□ -1.41
CKAP5-212ENST00000533413 NUP98P52948 1817 aa6.23□□□□□ -1.41
CKAP5-212ENST00000533413 AFDNP55196 1824 aaKnown RBP6.23□□□□□ -1.41
CKAP5-212ENST00000533413 KIAA1551Q9HCM1 1747 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 SRGNP10124 158 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 CLK1P49759 484 aaKnown RBP6.22□□□□□ -1.41
CKAP5-212ENST00000533413 SEPT2Q15019 361 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 FBXO33Q7Z6M2 555 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 KIAA1524Q8TCG1 905 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 NARFQ9UHQ1 456 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 SGSM2O43147 1006 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 SLC26A4O43511 780 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 ZPR1O75312 459 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 PPP1R37O75864 691 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 CASTP20810 708 aaKnown RBP6.22□□□□□ -1.41
CKAP5-212ENST00000533413 GUCY2CP25092 1073 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 GJB2P29033 226 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 CYP2C19P33261 490 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 PTGER2P43116 358 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 EIF5P55010 431 aaKnown RBP6.22□□□□□ -1.41
CKAP5-212ENST00000533413 DNM1Q05193 864 aaKnown RBP6.22□□□□□ -1.41
CKAP5-212ENST00000533413 CWC27Q6UX04 472 aaKnown RBP6.22□□□□□ -1.41
CKAP5-212ENST00000533413 CCDC83Q8IWF9 413 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 HELQQ8TDG4 1101 aa6.22□□□□□ -1.41
CKAP5-212ENST00000533413 PPP1R12CQ9BZL4 782 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms