RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 TNNI3KQ59H18 835 aa28.07■■■□□ 2.08
PKP3-210ENST00000533249 TREML2Q5T2D2 321 aa28.07■■■□□ 2.08
PKP3-210ENST00000533249 DBNDD2Q9BQY9 259 aa28.07■■■□□ 2.08
PKP3-210ENST00000533249 RNF208Q9H0X6 261 aa28.07■■■□□ 2.08
PKP3-210ENST00000533249 C1orf115Q9H7X2 142 aa28.07■■■□□ 2.08
PKP3-210ENST00000533249 FPGT-TNNI3KV9GXZ4 949 aa28.07■■■□□ 2.08
PKP3-210ENST00000533249 ATAD5Q96QE3 1844 aa28.06■■■□□ 2.08
PKP3-210ENST00000533249 SPP2Q13103 211 aa28.06■■■□□ 2.08
PKP3-210ENST00000533249 SLAIN1Q8ND83 568 aa28.06■■■□□ 2.08
PKP3-210ENST00000533249 NKX2-3Q8TAU0 364 aa28.06■■■□□ 2.08
PKP3-210ENST00000533249 GPR108Q9NPR9 543 aa28.06■■■□□ 2.08
PKP3-210ENST00000533249 TNPO2O14787 897 aaKnown RBP28.05■■■□□ 2.08
PKP3-210ENST00000533249 GJB1P08034 283 aa28.05■■■□□ 2.08
PKP3-210ENST00000533249 FLT3LGP49771 235 aa28.05■■■□□ 2.08
PKP3-210ENST00000533249 CCDC158Q5M9N0 1113 aa28.05■■■□□ 2.08
PKP3-210ENST00000533249 NAA16Q6N069 864 aaPredicted RBP28.05■■■□□ 2.08
PKP3-210ENST00000533249 AATFQ9NY61 560 aaKnown RBP eCLIP28.05■■■□□ 2.088e-9■■■□□ 14.8
PKP3-210ENST00000533249 ADCY3O60266 1144 aa28.04■■■□□ 2.08
PKP3-210ENST00000533249 SURF6O75683 361 aaKnown RBP28.04■■■□□ 2.08
PKP3-210ENST00000533249 CAP2P40123 477 aa28.04■■■□□ 2.08
PKP3-210ENST00000533249 GJA8P48165 433 aa28.04■■■□□ 2.08
PKP3-210ENST00000533249 ATP8B2P98198 1209 aa28.04■■■□□ 2.08
PKP3-210ENST00000533249 RRP1BQ14684 758 aaKnown RBP28.04■■■□□ 2.08
PKP3-210ENST00000533249 ANKRD13CQ8N6S4 541 aa28.04■■■□□ 2.08
PKP3-210ENST00000533249 ZNF280CQ8ND82 737 aa28.04■■■□□ 2.08
PKP3-210ENST00000533249 SSH3Q8TE77 659 aa28.04■■■□□ 2.08
PKP3-210ENST00000533249 MAST2Q6P0Q8 1798 aa28.04■■■□□ 2.08
PKP3-210ENST00000533249 H0YGN5 161 aa28.03■■■□□ 2.08
PKP3-210ENST00000533249 BAG3O95817 575 aa28.03■■■□□ 2.08
PKP3-210ENST00000533249 PROCA1Q8NCQ7 364 aaPredicted RBP28.03■■■□□ 2.08
PKP3-210ENST00000533249 UNC93B1Q9H1C4 597 aa28.03■■■□□ 2.08
PKP3-210ENST00000533249 PNMA3Q9UL41 463 aa28.03■■■□□ 2.08
PKP3-210ENST00000533249 CEP290O15078 2479 aa28.02■■■□□ 2.08
PKP3-210ENST00000533249 ELNP15502 786 aa28.02■■■□□ 2.08
PKP3-210ENST00000533249 HMGCS2P54868 508 aa28.02■■■□□ 2.08
PKP3-210ENST00000533249 FTSJ3Q8IY81 847 aaKnown RBP28.02■■■□□ 2.08
PKP3-210ENST00000533249 HERC5Q9UII4 1024 aaKnown RBP28.02■■■□□ 2.08
PKP3-210ENST00000533249 TAOK2Q9UL54 1235 aa28.02■■■□□ 2.08
PKP3-210ENST00000533249 COLQQ9Y215 455 aaPredicted RBP28.02■■■□□ 2.08
PKP3-210ENST00000533249 USP17L5A8MUK1 530 aa28.01■■■□□ 2.07
PKP3-210ENST00000533249 CYP2E1P05181 493 aaPredicted RBP28.01■■■□□ 2.07
PKP3-210ENST00000533249 HNRNPUQ00839 825 aaKnown RBP eCLIP28.01■■■□□ 2.07
PKP3-210ENST00000533249 MAPKAPK5Q8IW41 473 aa28.01■■■□□ 2.07
PKP3-210ENST00000533249 TGFBRAP1Q8WUH2 860 aa28.01■■■□□ 2.07
PKP3-210ENST00000533249 DPF3Q92784 378 aa28.01■■■□□ 2.07
PKP3-210ENST00000533249 PI4KBQ9UBF8 816 aa28.01■■■□□ 2.07
PKP3-210ENST00000533249 LOC285556D6RIA3 1793 aa28.01■■■□□ 2.07
PKP3-210ENST00000533249 PLCG2P16885 1265 aa28■■■□□ 2.07
PKP3-210ENST00000533249 ADGRA1Q86SQ6 560 aa28■■■□□ 2.07
PKP3-210ENST00000533249 ITPRIPQ8IWB1 547 aa28■■■□□ 2.07
PKP3-210ENST00000533249 U2AF1L4Q8WU68 220 aaKnown RBP28■■■□□ 2.07
PKP3-210ENST00000533249 TBC1D2Q9BYX2 928 aa28■■■□□ 2.07
PKP3-210ENST00000533249 DHX36Q9H2U1 1008 aaKnown RBP28■■■□□ 2.07
PKP3-210ENST00000533249 MYO5AQ9Y4I1 1855 aaKnown RBP28■■■□□ 2.07
PKP3-210ENST00000533249 SIPA1L1O43166 1804 aa27.99■■■□□ 2.07
PKP3-210ENST00000533249 INHAP05111 366 aa27.99■■■□□ 2.07
PKP3-210ENST00000533249 ZAP70P43403 619 aa27.99■■■□□ 2.07
PKP3-210ENST00000533249 FAM110CQ1W6H9 321 aa27.99■■■□□ 2.07
PKP3-210ENST00000533249 COA7Q96BR5 231 aa27.99■■■□□ 2.07
PKP3-210ENST00000533249 PPP4CP60510 307 aa27.98■■■□□ 2.07
PKP3-210ENST00000533249 PABPC4Q13310 644 aaKnown RBP eCLIP27.98■■■□□ 2.07
PKP3-210ENST00000533249 IRF5Q13568 498 aa27.98■■■□□ 2.07
PKP3-210ENST00000533249 AS3MTQ9HBK9 375 aa27.98■■■□□ 2.07
PKP3-210ENST00000533249 TLR7Q9NYK1 1049 aaKnown RBP27.98■■■□□ 2.07
PKP3-210ENST00000533249 CDK5RAP2Q96SN8 1893 aa27.98■■■□□ 2.07
PKP3-210ENST00000533249 DOCK3Q8IZD9 2030 aa27.97■■■□□ 2.07
PKP3-210ENST00000533249 FLT1P17948 1338 aa27.97■■■□□ 2.07
PKP3-210ENST00000533249 RLBP1P12271 317 aa27.97■■■□□ 2.07
PKP3-210ENST00000533249 PXYLP1Q8TE99 480 aa27.97■■■□□ 2.07
PKP3-210ENST00000533249 CCDC8Q9H0W5 538 aaPredicted RBP27.97■■■□□ 2.07
PKP3-210ENST00000533249 ASCC2Q9H1I8 757 aaPredicted RBP27.97■■■□□ 2.07
PKP3-210ENST00000533249 PIH1D3Q9NQM4 214 aaKnown RBP27.97■■■□□ 2.07
PKP3-210ENST00000533249 DBNLQ9UJU6 430 aaKnown RBP27.97■■■□□ 2.07
PKP3-210ENST00000533249 GCLCP48506 637 aaPredicted RBP27.96■■■□□ 2.07
PKP3-210ENST00000533249 FXR1P51114 621 aaKnown RBP eCLIP27.96■■■□□ 2.07
PKP3-210ENST00000533249 UBE2Q1Q7Z7E8 422 aa27.96■■■□□ 2.07
PKP3-210ENST00000533249 CRACR2BQ8N4Y2 399 aaPredicted RBP27.96■■■□□ 2.07
PKP3-210ENST00000533249 ZNF512BQ96KM6 892 aaPredicted RBP27.96■■■□□ 2.07
PKP3-210ENST00000533249 TRIM34Q9BYJ4 488 aa27.96■■■□□ 2.07
PKP3-210ENST00000533249 PALD1Q9ULE6 856 aa27.96■■■□□ 2.07
PKP3-210ENST00000533249 NOP58Q9Y2X3 529 aaKnown RBP27.96■■■□□ 2.07
PKP3-210ENST00000533249 ZBTB7BO15156 539 aaPredicted RBP27.95■■■□□ 2.06
PKP3-210ENST00000533249 FARP2O94887 1054 aaPredicted RBP27.95■■■□□ 2.06
PKP3-210ENST00000533249 SGPL1O95470 568 aa27.95■■■□□ 2.06
PKP3-210ENST00000533249 MTMR2Q13614 643 aa27.95■■■□□ 2.06
PKP3-210ENST00000533249 SH3D19Q5HYK7 790 aa27.95■■■□□ 2.06
PKP3-210ENST00000533249 HTATIP2Q9BUP3 242 aa27.95■■■□□ 2.06
PKP3-210ENST00000533249 DNAJC18Q9H819 358 aa27.95■■■□□ 2.06
PKP3-210ENST00000533249 SAP30BPQ9UHR5 308 aaKnown RBP27.95■■■□□ 2.06
PKP3-210ENST00000533249 FOCADQ5VW36 1801 aa27.95■■■□□ 2.06
PKP3-210ENST00000533249 ASNSP08243 561 aa27.94■■■□□ 2.06
PKP3-210ENST00000533249 DYNLL1P63167 89 aaKnown RBP27.94■■■□□ 2.06
PKP3-210ENST00000533249 JAG1P78504 1218 aa27.94■■■□□ 2.06
PKP3-210ENST00000533249 CYP7A1P22680 504 aa27.93■■■□□ 2.06
PKP3-210ENST00000533249 SHROOM1Q2M3G4 852 aaPredicted RBP27.93■■■□□ 2.06
PKP3-210ENST00000533249 FOXP4Q8IVH2 680 aaPredicted RBP27.93■■■□□ 2.06
PKP3-210ENST00000533249 EAF2Q96CJ1 260 aaPredicted RBP27.93■■■□□ 2.06
PKP3-210ENST00000533249 DEFB118Q96PH6 123 aa27.93■■■□□ 2.06
PKP3-210ENST00000533249 WDR18Q9BV38 432 aa27.93■■■□□ 2.06
PKP3-210ENST00000533249 IDH1O75874 414 aaKnown RBP27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms