RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 PARD6BQ9BYG5 372 aa10.66□□□□□ -0.7
BDNF-216ENST00000532997 MKRN1Q9UHC7 482 aaKnown RBP10.66□□□□□ -0.7
BDNF-216ENST00000532997 HNRNPH2P55795 449 aaKnown RBP10.66□□□□□ -0.7
BDNF-216ENST00000532997 STX17P56962 302 aa10.66□□□□□ -0.7
BDNF-216ENST00000532997 TCIRG1Q13488 830 aa10.66□□□□□ -0.7
BDNF-216ENST00000532997 ATG9AQ7Z3C6 839 aa10.66□□□□□ -0.7
BDNF-216ENST00000532997 ELOA2Q8IYF1 753 aaPredicted RBP10.66□□□□□ -0.7
BDNF-216ENST00000532997 TRMT44Q8IYL2 757 aaKnown RBP10.66□□□□□ -0.7
BDNF-216ENST00000532997 LUC7LQ9NQ29 371 aaKnown RBP10.66□□□□□ -0.7
BDNF-216ENST00000532997 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.66□□□□□ -0.7
BDNF-216ENST00000532997 CPDO75976 1380 aa10.66□□□□□ -0.7
BDNF-216ENST00000532997 HEG1Q9ULI3 1381 aa10.66□□□□□ -0.7
BDNF-216ENST00000532997 MINDY4BA8MYZ0 360 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 RHOXF2BP0C7M4 288 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 CALM1P0DP23 149 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 CALM2P0DP24 149 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 CALM3P0DP25 149 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 LONRF3Q496Y0 759 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 TTLL7Q6ZT98 887 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 RHOXF2Q9BQY4 288 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 DESI2Q9BSY9 194 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 USO1O60763 962 aaKnown RBP10.65□□□□□ -0.7
BDNF-216ENST00000532997 FMNL1O95466 1100 aaPredicted RBP10.65□□□□□ -0.7
BDNF-216ENST00000532997 LIFRP42702 1097 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 FOXO4P98177 505 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 SPA17Q15506 151 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 CCDC181Q5TID7 509 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 CABP5Q9NP86 173 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 MRFAP1Q9Y605 127 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 SLC4A4Q9Y6R1 1079 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 ZNF532Q9HCE3 1301 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 ERVV-2B6SEH9 535 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 A1BGP04217 495 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 PCCAP05165 728 aaPredicted RBP10.65□□□□□ -0.7
BDNF-216ENST00000532997 IFNAR1P17181 557 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 IGHMBP2P38935 993 aaKnown RBP10.65□□□□□ -0.7
BDNF-216ENST00000532997 SPECC1Q5M775 1068 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 AKNAD1Q5T1N1 836 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 FAM114A1Q8IWE2 563 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 DEF6Q9H4E7 631 aa10.65□□□□□ -0.7
BDNF-216ENST00000532997 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.65□□□□□ -0.7
BDNF-216ENST00000532997 SHTN1A0MZ66 631 aa10.65□□□□□ -0.71
BDNF-216ENST00000532997 KIF28PB7ZC32 967 aa10.65□□□□□ -0.71
BDNF-216ENST00000532997 PATL2C9JE40 543 aaKnown RBP10.65□□□□□ -0.71
BDNF-216ENST00000532997 KRT86O43790 486 aa10.65□□□□□ -0.71
BDNF-216ENST00000532997 ADD2P35612 726 aa10.65□□□□□ -0.71
BDNF-216ENST00000532997 MAP3K9P80192 1104 aa10.65□□□□□ -0.71
BDNF-216ENST00000532997 CHRNA2Q15822 529 aa10.65□□□□□ -0.71
BDNF-216ENST00000532997 SHC4Q6S5L8 630 aa10.65□□□□□ -0.71
BDNF-216ENST00000532997 ZNF579Q8NAF0 562 aaKnown RBP10.65□□□□□ -0.71
BDNF-216ENST00000532997 RPGRIP1Q96KN7 1286 aa10.65□□□□□ -0.71
BDNF-216ENST00000532997 PUS3Q9BZE2 481 aaKnown RBP10.65□□□□□ -0.71
BDNF-216ENST00000532997 MED4Q9NPJ6 270 aa10.65□□□□□ -0.71
BDNF-216ENST00000532997 FHOD1Q9Y613 1164 aa10.65□□□□□ -0.71
BDNF-216ENST00000532997 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.65□□□□□ -0.71
BDNF-216ENST00000532997 SEMA3EO15041 775 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 MBD4O95243 580 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 TRHP20396 242 aaPredicted RBP10.64□□□□□ -0.71
BDNF-216ENST00000532997 ADORA1P30542 326 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 NCAPHQ15003 741 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 CCDC93Q567U6 631 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 TRIM34Q9BYJ4 488 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 RBM28Q9NW13 759 aaKnown RBP10.64□□□□□ -0.71
BDNF-216ENST00000532997 PARP3Q9Y6F1 533 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 ARHGAP23Q9P227 1491 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 BTBD18B2RXH4 712 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 NLRP5P59047 1200 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 GOLGA8FQ08AF8 430 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 GOLGA8DPQ0D2H9 430 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 FKBP15Q5T1M5 1219 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 FAM71BQ8TC56 605 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 PUS7LQ9H0K6 701 aaKnown RBP10.64□□□□□ -0.71
BDNF-216ENST00000532997 NWD1Q149M9 1564 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 PXDNQ92626 1479 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 TMEM232C9JQI7 657 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 MMP1P03956 469 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 PDE6AP16499 860 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 PTPREP23469 700 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 GPTP24298 496 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 C10orf67Q8IYJ2 551 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 MAGEB6Q8N7X4 407 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 DPF2Q92785 391 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 GSDMAQ96QA5 445 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 MYL10Q9BUA6 226 aa10.64□□□□□ -0.71
BDNF-216ENST00000532997 LUC7L2Q9Y383 392 aaKnown RBP10.64□□□□□ -0.71
BDNF-216ENST00000532997 KDM3BQ7LBC6 1761 aa10.63□□□□□ -0.71
BDNF-216ENST00000532997 CHGBP05060 677 aa10.63□□□□□ -0.71
BDNF-216ENST00000532997 ITGA6P23229 1130 aa10.63□□□□□ -0.71
BDNF-216ENST00000532997 ACTN2P35609 894 aa10.63□□□□□ -0.71
BDNF-216ENST00000532997 PUM3Q15397 648 aaKnown RBP10.63□□□□□ -0.71
BDNF-216ENST00000532997 REXO1L1PQ8IX06 675 aa10.63□□□□□ -0.71
BDNF-216ENST00000532997 FAM89AQ96GI7 184 aa10.63□□□□□ -0.71
BDNF-216ENST00000532997 ILDR1Q86SU0 546 aaPredicted RBP10.63□□□□□ -0.71
BDNF-216ENST00000532997 GJB4Q9NTQ9 266 aa10.63□□□□□ -0.71
BDNF-216ENST00000532997 KCNJ14Q9UNX9 436 aa10.63□□□□□ -0.71
BDNF-216ENST00000532997 CTNND2Q9UQB3 1225 aa10.63□□□□□ -0.71
BDNF-216ENST00000532997 SRPRBQ9Y5M8 271 aaKnown RBP10.63□□□□□ -0.71
BDNF-216ENST00000532997 VWA3AA6NCI4 1184 aa10.63□□□□□ -0.71
BDNF-216ENST00000532997 PSMA7O14818 248 aa10.63□□□□□ -0.71
BDNF-216ENST00000532997 RANBP6O60518 1105 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms