RNA–Protein interactions for RNA: ENST00000532674.2

RPUSD4-206, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 5

Gene RPUSD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-206ENST00000532674 HMG20BQ9P0W2 317 aa23.15■■□□□ 1.3
RPUSD4-206ENST00000532674 DOCK1Q14185 1865 aa23.15■■□□□ 1.3
RPUSD4-206ENST00000532674 MAP4K4O95819 1239 aaPredicted RBP23.14■■□□□ 1.29
RPUSD4-206ENST00000532674 GCLCP48506 637 aaPredicted RBP23.14■■□□□ 1.29
RPUSD4-206ENST00000532674 ZNF280CQ8ND82 737 aa23.14■■□□□ 1.29
RPUSD4-206ENST00000532674 PAWRQ96IZ0 340 aaKnown RBP23.14■■□□□ 1.29
RPUSD4-206ENST00000532674 SZT2Q5T011 3432 aa23.14■■□□□ 1.29
RPUSD4-206ENST00000532674 PHIPQ8WWQ0 1821 aa23.14■■□□□ 1.29
RPUSD4-206ENST00000532674 PTPRFP10586 1907 aa23.14■■□□□ 1.29
RPUSD4-206ENST00000532674 A0A1W2PPC1 479 aa23.13■■□□□ 1.29
RPUSD4-206ENST00000532674 GNAI3P08754 354 aa23.13■■□□□ 1.29
RPUSD4-206ENST00000532674 GORABQ5T7V8 394 aa23.13■■□□□ 1.29
RPUSD4-206ENST00000532674 TBC1D9Q6ZT07 1266 aa23.13■■□□□ 1.29
RPUSD4-206ENST00000532674 SPATA5Q8NB90 893 aa23.13■■□□□ 1.29
RPUSD4-206ENST00000532674 NSUN4Q96CB9 384 aaKnown RBP23.13■■□□□ 1.29
RPUSD4-206ENST00000532674 TBC1D2Q9BYX2 928 aa23.13■■□□□ 1.29
RPUSD4-206ENST00000532674 RANBP2P49792 3224 aaKnown RBP23.13■■□□□ 1.29
RPUSD4-206ENST00000532674 CAP2P40123 477 aa23.12■■□□□ 1.29
RPUSD4-206ENST00000532674 HMGCS2P54868 508 aa23.12■■□□□ 1.29
RPUSD4-206ENST00000532674 PABPC4Q13310 644 aaKnown RBP eCLIP23.12■■□□□ 1.29
RPUSD4-206ENST00000532674 PI16Q6UXB8 463 aa23.12■■□□□ 1.29
RPUSD4-206ENST00000532674 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.12■■□□□ 1.29
RPUSD4-206ENST00000532674 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.12■■□□□ 1.29
RPUSD4-206ENST00000532674 USP17L5A8MUK1 530 aa23.11■■□□□ 1.29
RPUSD4-206ENST00000532674 MTX1Q13505 466 aa23.11■■□□□ 1.29
RPUSD4-206ENST00000532674 NECAB2Q7Z6G3 386 aa23.11■■□□□ 1.29
RPUSD4-206ENST00000532674 RAI14Q9P0K7 980 aa23.11■■□□□ 1.29
RPUSD4-206ENST00000532674 STAP2Q9UGK3 403 aa23.11■■□□□ 1.29
RPUSD4-206ENST00000532674 ARHGAP45Q92619 1136 aa23.1■■□□□ 1.29
RPUSD4-206ENST00000532674 ASCC2Q9H1I8 757 aaPredicted RBP23.1■■□□□ 1.29
RPUSD4-206ENST00000532674 GJD2Q9UKL4 321 aa23.1■■□□□ 1.29
RPUSD4-206ENST00000532674 HMGCRP04035 888 aa23.09■■□□□ 1.29
RPUSD4-206ENST00000532674 RRP1BQ14684 758 aaKnown RBP23.09■■□□□ 1.29
RPUSD4-206ENST00000532674 SH3D19Q5HYK7 790 aa23.09■■□□□ 1.29
RPUSD4-206ENST00000532674 TEX11Q8IYF3 940 aa23.09■■□□□ 1.29
RPUSD4-206ENST00000532674 DIS3LQ8TF46 1054 aaKnown RBP23.09■■□□□ 1.29
RPUSD4-206ENST00000532674 HERC5Q9UII4 1024 aaKnown RBP23.09■■□□□ 1.29
RPUSD4-206ENST00000532674 COL2A1P02458 1487 aaPredicted RBP23.09■■□□□ 1.29
RPUSD4-206ENST00000532674 ARID4AP29374 1257 aaPredicted RBP23.08■■□□□ 1.29
RPUSD4-206ENST00000532674 RARSP54136 660 aaKnown RBP23.08■■□□□ 1.29
RPUSD4-206ENST00000532674 ANKLE1Q8NAG6 615 aa23.08■■□□□ 1.29
RPUSD4-206ENST00000532674 AS3MTQ9HBK9 375 aa23.08■■□□□ 1.29
RPUSD4-206ENST00000532674 HMX1Q9NP08 348 aaPredicted RBP23.08■■□□□ 1.29
RPUSD4-206ENST00000532674 LRP2BPQ9P2M1 347 aa23.08■■□□□ 1.29
RPUSD4-206ENST00000532674 DOCK3Q8IZD9 2030 aa23.08■■□□□ 1.28
RPUSD4-206ENST00000532674 RPTORQ8N122 1335 aa23.08■■□□□ 1.28
RPUSD4-206ENST00000532674 PI4KBQ9UBF8 816 aa23.07■■□□□ 1.28
RPUSD4-206ENST00000532674 SOX1O00570 391 aaPredicted RBP23.06■■□□□ 1.28
RPUSD4-206ENST00000532674 MCAMP43121 646 aa23.06■■□□□ 1.28
RPUSD4-206ENST00000532674 SH3RF3Q8TEJ3 882 aaPredicted RBP23.06■■□□□ 1.28
RPUSD4-206ENST00000532674 NOL10Q9BSC4 688 aaKnown RBP23.06■■□□□ 1.28
RPUSD4-206ENST00000532674 DHX36Q9H2U1 1008 aaKnown RBP23.06■■□□□ 1.28
RPUSD4-206ENST00000532674 UQCRFS1P1P0C7P4 283 aa23.05■■□□□ 1.28
RPUSD4-206ENST00000532674 TRIM32Q13049 653 aa23.05■■□□□ 1.28
RPUSD4-206ENST00000532674 G3BP1Q13283 466 aaKnown RBP eCLIP23.05■■□□□ 1.28
RPUSD4-206ENST00000532674 LRCH3Q96II8 777 aa23.05■■□□□ 1.28
RPUSD4-206ENST00000532674 WDR18Q9BV38 432 aa23.05■■□□□ 1.28
RPUSD4-206ENST00000532674 NBPF3Q9H094 633 aa23.05■■□□□ 1.28
RPUSD4-206ENST00000532674 MORF4L1Q9UBU8 362 aa23.05■■□□□ 1.28
RPUSD4-206ENST00000532674 BACE1P56817 501 aa23.04■■□□□ 1.28
RPUSD4-206ENST00000532674 IRX3P78415 501 aaPredicted RBP23.04■■□□□ 1.28
RPUSD4-206ENST00000532674 C7orf61Q8IZ16 206 aa23.04■■□□□ 1.28
RPUSD4-206ENST00000532674 SLC17A8Q8NDX2 589 aa23.04■■□□□ 1.28
RPUSD4-206ENST00000532674 TMOD4Q9NZQ9 345 aa23.04■■□□□ 1.28
RPUSD4-206ENST00000532674 LOC285556D6RIA3 1793 aa23.04■■□□□ 1.28
RPUSD4-206ENST00000532674 BAG3O95817 575 aa23.03■■□□□ 1.28
RPUSD4-206ENST00000532674 GNAI2P04899 355 aa23.03■■□□□ 1.28
RPUSD4-206ENST00000532674 BMP8BP34820 402 aa23.03■■□□□ 1.28
RPUSD4-206ENST00000532674 MTMR2Q13614 643 aa23.03■■□□□ 1.28
RPUSD4-206ENST00000532674 P2RX7Q99572 595 aaKnown RBP23.03■■□□□ 1.28
RPUSD4-206ENST00000532674 GDF15Q99988 308 aa23.03■■□□□ 1.28
RPUSD4-206ENST00000532674 ASNSP08243 561 aa23.02■■□□□ 1.28
RPUSD4-206ENST00000532674 PLCG2P16885 1265 aa23.02■■□□□ 1.28
RPUSD4-206ENST00000532674 HOXA7P31268 230 aaPredicted RBP23.02■■□□□ 1.28
RPUSD4-206ENST00000532674 NAA16Q6N069 864 aaPredicted RBP23.02■■□□□ 1.28
RPUSD4-206ENST00000532674 TRIB2Q92519 343 aa23.02■■□□□ 1.28
RPUSD4-206ENST00000532674 AATFQ9NY61 560 aaKnown RBP eCLIP23.02■■□□□ 1.28
RPUSD4-206ENST00000532674 PNMA6EA0A0J9YXQ4 647 aa23.01■■□□□ 1.27
RPUSD4-206ENST00000532674 C19orf81C9J6K1 198 aa23.01■■□□□ 1.27
RPUSD4-206ENST00000532674 IPO8O15397 1037 aaKnown RBP23.01■■□□□ 1.27
RPUSD4-206ENST00000532674 CYP2B6P20813 491 aa23.01■■□□□ 1.27
RPUSD4-206ENST00000532674 MNX1P50219 401 aaPredicted RBP23.01■■□□□ 1.27
RPUSD4-206ENST00000532674 FOXP4Q8IVH2 680 aaPredicted RBP23.01■■□□□ 1.27
RPUSD4-206ENST00000532674 GPRC5AQ8NFJ5 357 aa23.01■■□□□ 1.27
RPUSD4-206ENST00000532674 TGFBRAP1Q8WUH2 860 aa23.01■■□□□ 1.27
RPUSD4-206ENST00000532674 NUDT12Q9BQG2 462 aa23.01■■□□□ 1.27
RPUSD4-206ENST00000532674 C11orf49Q9H6J7 331 aa23.01■■□□□ 1.27
RPUSD4-206ENST00000532674 SNRKQ9NRH2 765 aa23.01■■□□□ 1.27
RPUSD4-206ENST00000532674 ZMYND8Q9ULU4 1186 aaPredicted RBP23.01■■□□□ 1.27
RPUSD4-206ENST00000532674 PPP4CP60510 307 aa23■■□□□ 1.27
RPUSD4-206ENST00000532674 JAG1P78504 1218 aa23■■□□□ 1.27
RPUSD4-206ENST00000532674 MAPKAPK5Q8IW41 473 aa23■■□□□ 1.27
RPUSD4-206ENST00000532674 TRIM34Q9BYJ4 488 aa23■■□□□ 1.27
RPUSD4-206ENST00000532674 TXNRD2Q9NNW7 524 aa23■■□□□ 1.27
RPUSD4-206ENST00000532674 OGDHLQ9ULD0 1010 aa23■■□□□ 1.27
RPUSD4-206ENST00000532674 ATAD5Q96QE3 1844 aa22.99■■□□□ 1.27
RPUSD4-206ENST00000532674 USP17L10C9JJH3 530 aa22.99■■□□□ 1.27
RPUSD4-206ENST00000532674 PEX10O60683 326 aa22.99■■□□□ 1.27
RPUSD4-206ENST00000532674 XRCC5P13010 732 aaKnown RBP22.99■■□□□ 1.27
RPUSD4-206ENST00000532674 HERVK_113P62684 666 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms