RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 RRP1BQ14684 758 aaKnown RBP17.8■□□□□ 0.44
CTSB-221ENST00000531502 TBC1D9Q6ZT07 1266 aa17.8■□□□□ 0.44
CTSB-221ENST00000531502 ANKRD13CQ8N6S4 541 aa17.8■□□□□ 0.44
CTSB-221ENST00000531502 PROCA1Q8NCQ7 364 aaPredicted RBP17.8■□□□□ 0.44
CTSB-221ENST00000531502 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.8■□□□□ 0.443e-7■□□□□ 9.8
CTSB-221ENST00000531502 PAK6Q9NQU5 681 aaPredicted RBP17.8■□□□□ 0.44
CTSB-221ENST00000531502 ZBTB7BO15156 539 aaPredicted RBP17.79■□□□□ 0.44
CTSB-221ENST00000531502 FAM110CQ1W6H9 321 aa17.79■□□□□ 0.44
CTSB-221ENST00000531502 SPATA5Q8NB90 893 aa17.79■□□□□ 0.44
CTSB-221ENST00000531502 NEUROD6Q96NK8 337 aa17.79■□□□□ 0.44
CTSB-221ENST00000531502 SIPA1L1O43166 1804 aa17.78■□□□□ 0.44
CTSB-221ENST00000531502 LDHCP07864 332 aa17.78■□□□□ 0.44
CTSB-221ENST00000531502 CAPN2P17655 700 aa17.78■□□□□ 0.44
CTSB-221ENST00000531502 SPP2Q13103 211 aa17.78■□□□□ 0.44
CTSB-221ENST00000531502 ZNF280CQ8ND82 737 aa17.78■□□□□ 0.44
CTSB-221ENST00000531502 CRISPLD2Q9H0B8 497 aa17.78■□□□□ 0.44
CTSB-221ENST00000531502 ALPK3Q96L96 1907 aa17.77■□□□□ 0.44
CTSB-221ENST00000531502 CAP2P40123 477 aa17.77■□□□□ 0.44
CTSB-221ENST00000531502 MCAMP43121 646 aa17.77■□□□□ 0.44
CTSB-221ENST00000531502 GSTO1P78417 241 aa17.77■□□□□ 0.44
CTSB-221ENST00000531502 COA7Q96BR5 231 aa17.77■□□□□ 0.44
CTSB-221ENST00000531502 DEFB118Q96PH6 123 aa17.77■□□□□ 0.44
CTSB-221ENST00000531502 PNMA3Q9UL41 463 aa17.77■□□□□ 0.44
CTSB-221ENST00000531502 TNNQ9UQP3 1299 aa17.77■□□□□ 0.44
CTSB-221ENST00000531502 NR2E3Q9Y5X4 410 aa17.77■□□□□ 0.44
CTSB-221ENST00000531502 PNMA6EA0A0J9YXQ4 647 aa17.76■□□□□ 0.43
CTSB-221ENST00000531502 HMGCS2P54868 508 aa17.76■□□□□ 0.43
CTSB-221ENST00000531502 SH3D19Q5HYK7 790 aa17.76■□□□□ 0.43
CTSB-221ENST00000531502 TBC1D2Q9BYX2 928 aa17.76■□□□□ 0.43
CTSB-221ENST00000531502 GJD2Q9UKL4 321 aa17.76■□□□□ 0.43
CTSB-221ENST00000531502 PLXNB2O15031 1838 aa17.75■□□□□ 0.43
CTSB-221ENST00000531502 TFRCP02786 760 aaKnown RBP17.75■□□□□ 0.43
CTSB-221ENST00000531502 TRIM27P14373 513 aa17.75■□□□□ 0.43
CTSB-221ENST00000531502 GCLCP48506 637 aaPredicted RBP17.75■□□□□ 0.43
CTSB-221ENST00000531502 ASCC2Q9H1I8 757 aaPredicted RBP17.75■□□□□ 0.43
CTSB-221ENST00000531502 RAI14Q9P0K7 980 aa17.75■□□□□ 0.43
CTSB-221ENST00000531502 USP17L5A8MUK1 530 aa17.74■□□□□ 0.43
CTSB-221ENST00000531502 GNAI2P04899 355 aa17.74■□□□□ 0.43
CTSB-221ENST00000531502 GORABQ5T7V8 394 aa17.74■□□□□ 0.43
CTSB-221ENST00000531502 TEX11Q8IYF3 940 aa17.74■□□□□ 0.43
CTSB-221ENST00000531502 SH3RF3Q8TEJ3 882 aaPredicted RBP17.74■□□□□ 0.43
CTSB-221ENST00000531502 HERC5Q9UII4 1024 aaKnown RBP17.74■□□□□ 0.43
CTSB-221ENST00000531502 CDK5RAP2Q96SN8 1893 aa17.73■□□□□ 0.43
CTSB-221ENST00000531502 JAG1P78504 1218 aa17.73■□□□□ 0.43
CTSB-221ENST00000531502 PABPC4Q13310 644 aaKnown RBP eCLIP17.73■□□□□ 0.43
CTSB-221ENST00000531502 METTL16Q86W50 562 aaKnown RBP17.73■□□□□ 0.43
CTSB-221ENST00000531502 PAWRQ96IZ0 340 aaKnown RBP17.73■□□□□ 0.43
CTSB-221ENST00000531502 WDR18Q9BV38 432 aa17.73■□□□□ 0.43
CTSB-221ENST00000531502 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.73■□□□□ 0.431e-7■■■□□ 17.4
CTSB-221ENST00000531502 DNAJC18Q9H819 358 aa17.73■□□□□ 0.43
CTSB-221ENST00000531502 TAOK2Q9UL54 1235 aa17.73■□□□□ 0.43
CTSB-221ENST00000531502 FOCADQ5VW36 1801 aa17.72■□□□□ 0.43
CTSB-221ENST00000531502 MAST2Q6P0Q8 1798 aa17.72■□□□□ 0.43
CTSB-221ENST00000531502 EVI5O60447 810 aa17.72■□□□□ 0.43
CTSB-221ENST00000531502 HMGCRP04035 888 aa17.72■□□□□ 0.43
CTSB-221ENST00000531502 UQCRFS1P1P0C7P4 283 aa17.72■□□□□ 0.43
CTSB-221ENST00000531502 PPP4CP60510 307 aa17.72■□□□□ 0.43
CTSB-221ENST00000531502 TRIM32Q13049 653 aa17.72■□□□□ 0.43
CTSB-221ENST00000531502 G3BP1Q13283 466 aaKnown RBP eCLIP17.72■□□□□ 0.43
CTSB-221ENST00000531502 ATF7IPQ6VMQ6 1270 aa17.72■□□□□ 0.43
CTSB-221ENST00000531502 DIS3LQ8TF46 1054 aaKnown RBP17.72■□□□□ 0.43
CTSB-221ENST00000531502 LRP2BPQ9P2M1 347 aa17.72■□□□□ 0.43
CTSB-221ENST00000531502 PI4KBQ9UBF8 816 aa17.72■□□□□ 0.43
CTSB-221ENST00000531502 MORF4L1Q9UBU8 362 aa17.72■□□□□ 0.43
CTSB-221ENST00000531502 MYO5AQ9Y4I1 1855 aaKnown RBP17.71■□□□□ 0.43
CTSB-221ENST00000531502 A0A1W2PPC1 479 aa17.71■□□□□ 0.43
CTSB-221ENST00000531502 MNX1P50219 401 aaPredicted RBP17.71■□□□□ 0.43
CTSB-221ENST00000531502 ADGRA1Q86SQ6 560 aa17.71■□□□□ 0.43
CTSB-221ENST00000531502 DHX36Q9H2U1 1008 aaKnown RBP17.71■□□□□ 0.43
CTSB-221ENST00000531502 AS3MTQ9HBK9 375 aa17.71■□□□□ 0.43
CTSB-221ENST00000531502 AATFQ9NY61 560 aaKnown RBP eCLIP17.71■□□□□ 0.43
CTSB-221ENST00000531502 RPTORQ8N122 1335 aa17.71■□□□□ 0.42
CTSB-221ENST00000531502 IPO8O15397 1037 aaKnown RBP17.7■□□□□ 0.42
CTSB-221ENST00000531502 BCAR3O75815 825 aa17.7■□□□□ 0.42
CTSB-221ENST00000531502 CYP2E1P05181 493 aaPredicted RBP17.7■□□□□ 0.42
CTSB-221ENST00000531502 HOXA7P31268 230 aaPredicted RBP17.7■□□□□ 0.42
CTSB-221ENST00000531502 BACE1P56817 501 aa17.7■□□□□ 0.42
CTSB-221ENST00000531502 MTMR2Q13614 643 aa17.7■□□□□ 0.42
CTSB-221ENST00000531502 POLA2Q14181 598 aa17.7■□□□□ 0.42
CTSB-221ENST00000531502 SHROOM1Q2M3G4 852 aaPredicted RBP17.7■□□□□ 0.42
CTSB-221ENST00000531502 NAA16Q6N069 864 aaPredicted RBP17.7■□□□□ 0.42
CTSB-221ENST00000531502 NECAB2Q7Z6G3 386 aa17.7■□□□□ 0.42
CTSB-221ENST00000531502 ANKLE1Q8NAG6 615 aa17.7■□□□□ 0.42
CTSB-221ENST00000531502 GPR108Q9NPR9 543 aa17.7■□□□□ 0.42
CTSB-221ENST00000531502 SNRKQ9NRH2 765 aa17.7■□□□□ 0.42
CTSB-221ENST00000531502 SOX1O00570 391 aaPredicted RBP17.69■□□□□ 0.42
CTSB-221ENST00000531502 PEX10O60683 326 aa17.69■□□□□ 0.42
CTSB-221ENST00000531502 ASNSP08243 561 aa17.69■□□□□ 0.42
CTSB-221ENST00000531502 TNNI3KQ59H18 835 aa17.69■□□□□ 0.42
CTSB-221ENST00000531502 TGFBRAP1Q8WUH2 860 aa17.69■□□□□ 0.42
CTSB-221ENST00000531502 P2RX7Q99572 595 aaKnown RBP17.69■□□□□ 0.42
CTSB-221ENST00000531502 DBNDD2Q9BQY9 259 aa17.69■□□□□ 0.42
CTSB-221ENST00000531502 TXNRD2Q9NNW7 524 aa17.69■□□□□ 0.42
CTSB-221ENST00000531502 STAP2Q9UGK3 403 aa17.69■□□□□ 0.42
CTSB-221ENST00000531502 FPGT-TNNI3KV9GXZ4 949 aa17.69■□□□□ 0.42
CTSB-221ENST00000531502 FLT1P17948 1338 aa17.69■□□□□ 0.42
CTSB-221ENST00000531502 LAMA3Q16787 3333 aa17.68■□□□□ 0.42
CTSB-221ENST00000531502 BAG3O95817 575 aa17.68■□□□□ 0.42
CTSB-221ENST00000531502 PLCG2P16885 1265 aa17.68■□□□□ 0.42
CTSB-221ENST00000531502 MAP3K21Q5TCX8 1036 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms