RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 FAM196BA6NMK8 535 aa21.91■■□□□ 1.1
PTPN11-204ENST00000531326 NPM3O75607 178 aaKnown RBP21.91■■□□□ 1.1
PTPN11-204ENST00000531326 FCGRTP55899 365 aa21.91■■□□□ 1.1
PTPN11-204ENST00000531326 SLC45A1Q9Y2W3 748 aa21.91■■□□□ 1.1
PTPN11-204ENST00000531326 TRIM75PA6NK02 468 aa21.9■■□□□ 1.1
PTPN11-204ENST00000531326 TBC1D12O60347 775 aa21.9■■□□□ 1.1
PTPN11-204ENST00000531326 MCAMP43121 646 aa21.9■■□□□ 1.1
PTPN11-204ENST00000531326 GORABQ5T7V8 394 aa21.9■■□□□ 1.1
PTPN11-204ENST00000531326 NOP58Q9Y2X3 529 aaKnown RBP21.9■■□□□ 1.1
PTPN11-204ENST00000531326 COL2A1P02458 1487 aaPredicted RBP21.89■■□□□ 1.09
PTPN11-204ENST00000531326 ATAD5Q96QE3 1844 aa21.88■■□□□ 1.09
PTPN11-204ENST00000531326 HMMRO75330 724 aa21.88■■□□□ 1.09
PTPN11-204ENST00000531326 SURF6O75683 361 aaKnown RBP21.88■■□□□ 1.09
PTPN11-204ENST00000531326 LDHCP07864 332 aa21.88■■□□□ 1.09
PTPN11-204ENST00000531326 CCL5P13501 91 aa21.88■■□□□ 1.09
PTPN11-204ENST00000531326 GSTO1P78417 241 aa21.88■■□□□ 1.09
PTPN11-204ENST00000531326 G3BP1Q13283 466 aaKnown RBP eCLIP21.88■■□□□ 1.09
PTPN11-204ENST00000531326 AAMPQ13685 434 aa21.88■■□□□ 1.09
PTPN11-204ENST00000531326 OSBPL5Q9H0X9 879 aaPredicted RBP21.88■■□□□ 1.09
PTPN11-204ENST00000531326 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.88■■□□□ 1.09
PTPN11-204ENST00000531326 RAI14Q9P0K7 980 aa21.88■■□□□ 1.09
PTPN11-204ENST00000531326 CEP290O15078 2479 aa21.87■■□□□ 1.09
PTPN11-204ENST00000531326 MAP4K4O95819 1239 aaPredicted RBP21.87■■□□□ 1.09
PTPN11-204ENST00000531326 GJA8P48165 433 aa21.87■■□□□ 1.09
PTPN11-204ENST00000531326 RRP1BQ14684 758 aaKnown RBP21.87■■□□□ 1.09
PTPN11-204ENST00000531326 TREML2Q5T2D2 321 aa21.87■■□□□ 1.09
PTPN11-204ENST00000531326 AGTPBP1Q9UPW5 1226 aa21.87■■□□□ 1.09
PTPN11-204ENST00000531326 COLQQ9Y215 455 aaPredicted RBP21.87■■□□□ 1.09
PTPN11-204ENST00000531326 SIPA1L1O43166 1804 aa21.86■■□□□ 1.09
PTPN11-204ENST00000531326 H0YGN5 161 aa21.86■■□□□ 1.09
PTPN11-204ENST00000531326 GJB1P08034 283 aa21.86■■□□□ 1.09
PTPN11-204ENST00000531326 UBE2Q1Q7Z7E8 422 aa21.86■■□□□ 1.09
PTPN11-204ENST00000531326 SLAIN1Q8ND83 568 aa21.86■■□□□ 1.09
PTPN11-204ENST00000531326 SMCR8Q8TEV9 937 aaPredicted RBP21.86■■□□□ 1.09
PTPN11-204ENST00000531326 RNF208Q9H0X6 261 aa21.86■■□□□ 1.09
PTPN11-204ENST00000531326 BIN2Q9UBW5 565 aaPredicted RBP21.86■■□□□ 1.09
PTPN11-204ENST00000531326 LOC285556D6RIA3 1793 aa21.86■■□□□ 1.09
PTPN11-204ENST00000531326 DOCK3Q8IZD9 2030 aa21.85■■□□□ 1.09
PTPN11-204ENST00000531326 UQCRFS1P1P0C7P4 283 aa21.85■■□□□ 1.09
PTPN11-204ENST00000531326 FLT3LGP49771 235 aa21.85■■□□□ 1.09
PTPN11-204ENST00000531326 FXR1P51114 621 aaKnown RBP eCLIP21.85■■□□□ 1.09
PTPN11-204ENST00000531326 TEX11Q8IYF3 940 aa21.85■■□□□ 1.09
PTPN11-204ENST00000531326 NKX2-3Q8TAU0 364 aa21.85■■□□□ 1.09
PTPN11-204ENST00000531326 SH3RF3Q8TEJ3 882 aaPredicted RBP21.85■■□□□ 1.09
PTPN11-204ENST00000531326 LRP2BPQ9P2M1 347 aa21.85■■□□□ 1.09
PTPN11-204ENST00000531326 MAST2Q6P0Q8 1798 aa21.84■■□□□ 1.09
PTPN11-204ENST00000531326 MYO5AQ9Y4I1 1855 aaKnown RBP21.84■■□□□ 1.09
PTPN11-204ENST00000531326 UBXN2AP68543 259 aa21.84■■□□□ 1.09
PTPN11-204ENST00000531326 SPP2Q13103 211 aa21.84■■□□□ 1.09
PTPN11-204ENST00000531326 ANKRD13CQ8N6S4 541 aa21.84■■□□□ 1.09
PTPN11-204ENST00000531326 UNC93B1Q9H1C4 597 aa21.84■■□□□ 1.09
PTPN11-204ENST00000531326 SNRKQ9NRH2 765 aa21.84■■□□□ 1.09
PTPN11-204ENST00000531326 EXOC6BQ9Y2D4 811 aa21.84■■□□□ 1.09
PTPN11-204ENST00000531326 CDK5RAP2Q96SN8 1893 aa21.83■■□□□ 1.09
PTPN11-204ENST00000531326 TNPO2O14787 897 aaKnown RBP21.83■■□□□ 1.09
PTPN11-204ENST00000531326 ADCY3O60266 1144 aa21.83■■□□□ 1.09
PTPN11-204ENST00000531326 ELNP15502 786 aa21.83■■□□□ 1.09
PTPN11-204ENST00000531326 CAP2P40123 477 aa21.83■■□□□ 1.09
PTPN11-204ENST00000531326 TNNI3KQ59H18 835 aa21.83■■□□□ 1.09
PTPN11-204ENST00000531326 PROCA1Q8NCQ7 364 aaPredicted RBP21.83■■□□□ 1.09
PTPN11-204ENST00000531326 DBNDD2Q9BQY9 259 aa21.83■■□□□ 1.09
PTPN11-204ENST00000531326 GPR108Q9NPR9 543 aa21.83■■□□□ 1.09
PTPN11-204ENST00000531326 FPGT-TNNI3KV9GXZ4 949 aa21.83■■□□□ 1.09
PTPN11-204ENST00000531326 OS9Q13438 667 aaPredicted RBP21.82■■□□□ 1.08
PTPN11-204ENST00000531326 ZNF280CQ8ND82 737 aa21.82■■□□□ 1.08
PTPN11-204ENST00000531326 U2AF1L4Q8WU68 220 aaKnown RBP21.82■■□□□ 1.08
PTPN11-204ENST00000531326 FOCADQ5VW36 1801 aa21.81■■□□□ 1.08
PTPN11-204ENST00000531326 CYP2E1P05181 493 aaPredicted RBP21.81■■□□□ 1.08
PTPN11-204ENST00000531326 HMGCS2P54868 508 aa21.81■■□□□ 1.08
PTPN11-204ENST00000531326 IRF5Q13568 498 aa21.81■■□□□ 1.08
PTPN11-204ENST00000531326 NAA16Q6N069 864 aaPredicted RBP21.81■■□□□ 1.08
PTPN11-204ENST00000531326 ADGRA1Q86SQ6 560 aa21.81■■□□□ 1.08
PTPN11-204ENST00000531326 PXYLP1Q8TE99 480 aa21.81■■□□□ 1.08
PTPN11-204ENST00000531326 AATFQ9NY61 560 aaKnown RBP eCLIP21.81■■□□□ 1.08
PTPN11-204ENST00000531326 HERC5Q9UII4 1024 aaKnown RBP21.81■■□□□ 1.08
PTPN11-204ENST00000531326 PNMA3Q9UL41 463 aa21.81■■□□□ 1.08
PTPN11-204ENST00000531326 INHAP05111 366 aa21.8■■□□□ 1.08
PTPN11-204ENST00000531326 FAM110CQ1W6H9 321 aa21.8■■□□□ 1.08
PTPN11-204ENST00000531326 HSP90AB4PQ58FF6 505 aa21.8■■□□□ 1.08
PTPN11-204ENST00000531326 TTC39AQ5SRH9 613 aa21.8■■□□□ 1.08
PTPN11-204ENST00000531326 DPF3Q92784 378 aa21.8■■□□□ 1.08
PTPN11-204ENST00000531326 DCTPP1Q9H773 170 aa21.8■■□□□ 1.08
PTPN11-204ENST00000531326 RANBP2P49792 3224 aaKnown RBP21.79■■□□□ 1.08
PTPN11-204ENST00000531326 USP17L5A8MUK1 530 aa21.79■■□□□ 1.08
PTPN11-204ENST00000531326 SGPL1O95470 568 aa21.79■■□□□ 1.08
PTPN11-204ENST00000531326 PPP4CP60510 307 aa21.79■■□□□ 1.08
PTPN11-204ENST00000531326 JAG1P78504 1218 aa21.79■■□□□ 1.08
PTPN11-204ENST00000531326 HDAC1Q13547 482 aaPredicted RBP21.79■■□□□ 1.08
PTPN11-204ENST00000531326 SH3D19Q5HYK7 790 aa21.79■■□□□ 1.08
PTPN11-204ENST00000531326 TBC1D2Q9BYX2 928 aa21.79■■□□□ 1.08
PTPN11-204ENST00000531326 DNAJC18Q9H819 358 aa21.79■■□□□ 1.08
PTPN11-204ENST00000531326 PI4KBQ9UBF8 816 aa21.79■■□□□ 1.08
PTPN11-204ENST00000531326 TRIOBPQ9H2D6 2365 aa21.79■■□□□ 1.08
PTPN11-204ENST00000531326 CCDC158Q5M9N0 1113 aa21.78■■□□□ 1.08
PTPN11-204ENST00000531326 ERC1Q8IUD2 1116 aa21.78■■□□□ 1.08
PTPN11-204ENST00000531326 MAPKAPK5Q8IW41 473 aa21.78■■□□□ 1.08
PTPN11-204ENST00000531326 TGFBRAP1Q8WUH2 860 aa21.78■■□□□ 1.08
PTPN11-204ENST00000531326 COA7Q96BR5 231 aa21.78■■□□□ 1.08
PTPN11-204ENST00000531326 NOL10Q9BSC4 688 aaKnown RBP21.78■■□□□ 1.08
PTPN11-204ENST00000531326 ASCC2Q9H1I8 757 aaPredicted RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms