RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 SLC44A5Q8NCS7 719 aa22.57■■□□□ 1.2
SMPD1-205ENST00000531303 CSRNP1Q96S65 589 aa22.57■■□□□ 1.2
SMPD1-205ENST00000531303 UPF3BQ9BZI7 483 aaKnown RBP22.57■■□□□ 1.2
SMPD1-205ENST00000531303 DEFB129Q9H1M3 183 aa22.57■■□□□ 1.2
SMPD1-205ENST00000531303 DHX36Q9H2U1 1008 aaKnown RBP22.57■■□□□ 1.2
SMPD1-205ENST00000531303 NMRK2Q9NPI5 230 aa22.57■■□□□ 1.2
SMPD1-205ENST00000531303 CLEC11AQ9Y240 323 aa22.57■■□□□ 1.2
SMPD1-205ENST00000531303 NEDD4P46934 1319 aa22.57■■□□□ 1.2
SMPD1-205ENST00000531303 VEGFAP15692 232 aaPredicted RBP22.56■■□□□ 1.2
SMPD1-205ENST00000531303 COL9A3Q14050 684 aaPredicted RBP22.56■■□□□ 1.2
SMPD1-205ENST00000531303 CRACR2BQ8N4Y2 399 aaPredicted RBP22.56■■□□□ 1.2
SMPD1-205ENST00000531303 STAG1Q8WVM7 1258 aa22.56■■□□□ 1.2
SMPD1-205ENST00000531303 DCPSQ96C86 337 aaKnown RBP22.56■■□□□ 1.2
SMPD1-205ENST00000531303 RNF41Q9H4P4 317 aaPredicted RBP22.56■■□□□ 1.2
SMPD1-205ENST00000531303 PI4KBQ9UBF8 816 aa22.56■■□□□ 1.2
SMPD1-205ENST00000531303 TRDNQ13061 729 aa22.55■■□□□ 1.2
SMPD1-205ENST00000531303 PRAMEF18Q5VWM3 479 aa22.55■■□□□ 1.2
SMPD1-205ENST00000531303 NEK1Q96PY6 1258 aa22.55■■□□□ 1.2
SMPD1-205ENST00000531303 TRIM34Q9BYJ4 488 aa22.55■■□□□ 1.2
SMPD1-205ENST00000531303 FAM196BA6NMK8 535 aa22.54■■□□□ 1.2
SMPD1-205ENST00000531303 B4E1Z4 1266 aa22.54■■□□□ 1.2
SMPD1-205ENST00000531303 PSMA5P28066 241 aa22.54■■□□□ 1.2
SMPD1-205ENST00000531303 PDE4BQ07343 736 aa22.54■■□□□ 1.2
SMPD1-205ENST00000531303 RALYLQ86SE5 291 aaKnown RBP22.54■■□□□ 1.2
SMPD1-205ENST00000531303 PNMA8AQ86V59 439 aaPredicted RBP22.54■■□□□ 1.2
SMPD1-205ENST00000531303 NCOA7Q8NI08 942 aa22.54■■□□□ 1.2
SMPD1-205ENST00000531303 NKX2-3Q8TAU0 364 aa22.54■■□□□ 1.2
SMPD1-205ENST00000531303 MKNK2Q9HBH9 465 aa22.54■■□□□ 1.2
SMPD1-205ENST00000531303 SERPINB13Q9UIV8 391 aa22.54■■□□□ 1.2
SMPD1-205ENST00000531303 SIPA1L1O43166 1804 aa22.54■■□□□ 1.2
SMPD1-205ENST00000531303 ATRNL1Q5VV63 1379 aa22.54■■□□□ 1.2
SMPD1-205ENST00000531303 CDK8P49336 464 aa22.54■■□□□ 1.2
SMPD1-205ENST00000531303 BLOC1S2Q6QNY1 142 aa22.54■■□□□ 1.2
SMPD1-205ENST00000531303 CHST3Q7LGC8 479 aa22.54■■□□□ 1.2
SMPD1-205ENST00000531303 TCEANC2Q96MN5 208 aa22.54■■□□□ 1.2
SMPD1-205ENST00000531303 MYH8P13535 1937 aa22.53■■□□□ 1.2
SMPD1-205ENST00000531303 ROBO3Q96MS0 1386 aa22.53■■□□□ 1.2
SMPD1-205ENST00000531303 ADM5C9JUS6 153 aa22.53■■□□□ 1.2
SMPD1-205ENST00000531303 RANBP6O60518 1105 aaKnown RBP22.53■■□□□ 1.2
SMPD1-205ENST00000531303 POTEIP0CG38 1075 aa22.53■■□□□ 1.2
SMPD1-205ENST00000531303 POTEJP0CG39 1038 aa22.53■■□□□ 1.2
SMPD1-205ENST00000531303 NEK4P51957 841 aa22.53■■□□□ 1.2
SMPD1-205ENST00000531303 RABEP1Q15276 862 aa22.53■■□□□ 1.2
SMPD1-205ENST00000531303 DLK2Q6UY11 383 aa22.53■■□□□ 1.2
SMPD1-205ENST00000531303 C16orf86Q6ZW13 317 aa22.53■■□□□ 1.2
SMPD1-205ENST00000531303 SULF1Q8IWU6 871 aa22.53■■□□□ 1.2
SMPD1-205ENST00000531303 KRT23Q9C075 422 aa22.53■■□□□ 1.2
SMPD1-205ENST00000531303 RBM19Q9Y4C8 960 aaKnown RBP22.53■■□□□ 1.2
SMPD1-205ENST00000531303 CYP46A1Q9Y6A2 500 aa22.53■■□□□ 1.2
SMPD1-205ENST00000531303 PITPNM2Q9BZ72 1349 aa22.52■■□□□ 1.2
SMPD1-205ENST00000531303 COL2A1P02458 1487 aaPredicted RBP22.52■■□□□ 1.2
SMPD1-205ENST00000531303 KDM4AO75164 1064 aa22.52■■□□□ 1.2
SMPD1-205ENST00000531303 MIGA2Q7L4E1 593 aa22.52■■□□□ 1.2
SMPD1-205ENST00000531303 KRT26Q7Z3Y9 468 aa22.52■■□□□ 1.2
SMPD1-205ENST00000531303 FOXP4Q8IVH2 680 aaPredicted RBP22.52■■□□□ 1.2
SMPD1-205ENST00000531303 ZC3H15Q8WU90 426 aaKnown RBP22.52■■□□□ 1.2
SMPD1-205ENST00000531303 IL17RAQ96F46 866 aa22.52■■□□□ 1.2
SMPD1-205ENST00000531303 TEPSINQ96N21 525 aa22.52■■□□□ 1.2
SMPD1-205ENST00000531303 TM6SF1Q9BZW5 370 aa22.52■■□□□ 1.2
SMPD1-205ENST00000531303 CNNM2Q9H8M5 875 aa22.52■■□□□ 1.2
SMPD1-205ENST00000531303 ZSWIM6Q9HCJ5 1215 aa22.52■■□□□ 1.2
SMPD1-205ENST00000531303 PGAP2Q9UHJ9 254 aa22.52■■□□□ 1.2
SMPD1-205ENST00000531303 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.52■■□□□ 1.2
SMPD1-205ENST00000531303 GABPAQ06546 454 aa22.51■■□□□ 1.19
SMPD1-205ENST00000531303 FAM47AQ5JRC9 791 aa22.51■■□□□ 1.19
SMPD1-205ENST00000531303 NBPF12Q5TAG4 269 aaPredicted RBP22.51■■□□□ 1.19
SMPD1-205ENST00000531303 RUFY3Q7L099 469 aa22.51■■□□□ 1.19
SMPD1-205ENST00000531303 USP48Q86UV5 1035 aa22.51■■□□□ 1.19
SMPD1-205ENST00000531303 EHD4Q9H223 541 aa22.51■■□□□ 1.19
SMPD1-205ENST00000531303 CYB5R4Q7L1T6 521 aa22.5■■□□□ 1.19
SMPD1-205ENST00000531303 MB21D2Q8IYB1 491 aaPredicted RBP22.5■■□□□ 1.19
SMPD1-205ENST00000531303 ZNF444Q8N0Y2 327 aaPredicted RBP22.5■■□□□ 1.19
SMPD1-205ENST00000531303 LRRC2Q9BYS8 371 aa22.5■■□□□ 1.19
SMPD1-205ENST00000531303 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.5■■□□□ 1.19
SMPD1-205ENST00000531303 ZNF287Q9HBT7 754 aa22.5■■□□□ 1.19
SMPD1-205ENST00000531303 ORC4O43929 436 aa22.49■■□□□ 1.19
SMPD1-205ENST00000531303 FGRP09769 529 aa22.49■■□□□ 1.19
SMPD1-205ENST00000531303 PCP11498 1178 aaKnown RBP22.49■■□□□ 1.19
SMPD1-205ENST00000531303 RPS6KB1P23443 525 aa22.49■■□□□ 1.19
SMPD1-205ENST00000531303 DHX32Q7L7V1 743 aaKnown RBP22.49■■□□□ 1.19
SMPD1-205ENST00000531303 ESR2Q92731 530 aa22.49■■□□□ 1.19
SMPD1-205ENST00000531303 DNAJC18Q9H819 358 aa22.49■■□□□ 1.19
SMPD1-205ENST00000531303 PDRG1Q9NUG6 133 aa22.49■■□□□ 1.19
SMPD1-205ENST00000531303 ZSWIM5Q9P217 1185 aa22.49■■□□□ 1.19
SMPD1-205ENST00000531303 SWAP70Q9UH65 585 aa22.49■■□□□ 1.19
SMPD1-205ENST00000531303 PRC1O43663 620 aa22.48■■□□□ 1.19
SMPD1-205ENST00000531303 HMGB1P09429 215 aaKnown RBP22.48■■□□□ 1.19
SMPD1-205ENST00000531303 RASA1P20936 1047 aa22.48■■□□□ 1.19
SMPD1-205ENST00000531303 MCM5P33992 734 aa22.48■■□□□ 1.19
SMPD1-205ENST00000531303 SHMT1P34896 483 aa22.48■■□□□ 1.19
SMPD1-205ENST00000531303 MAP1SQ66K74 1059 aaPredicted RBP22.48■■□□□ 1.19
SMPD1-205ENST00000531303 ZKSCAN3Q9BRR0 538 aa22.48■■□□□ 1.19
SMPD1-205ENST00000531303 GLIS2Q9BZE0 524 aaPredicted RBP22.48■■□□□ 1.19
SMPD1-205ENST00000531303 TSPY2A6NKD2 308 aa22.47■■□□□ 1.19
SMPD1-205ENST00000531303 TFAP4Q01664 338 aa22.47■■□□□ 1.19
SMPD1-205ENST00000531303 PPP2R3BQ9Y5P8 575 aa22.47■■□□□ 1.19
SMPD1-205ENST00000531303 ANTXR2P58335 489 aa22.47■■□□□ 1.19
SMPD1-205ENST00000531303 FGD1P98174 961 aa22.47■■□□□ 1.19
SMPD1-205ENST00000531303 NOL8Q76FK4 1167 aaKnown RBP22.47■■□□□ 1.19
SMPD1-205ENST00000531303 HERC5Q9UII4 1024 aaKnown RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms