RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 TREML2Q5T2D2 321 aa18.42■□□□□ 0.54
CAPN1-219ENST00000530495 GORABQ5T7V8 394 aa18.42■□□□□ 0.54
CAPN1-219ENST00000530495 PI16Q6UXB8 463 aa18.42■□□□□ 0.54
CAPN1-219ENST00000530495 COA7Q96BR5 231 aa18.42■□□□□ 0.54
CAPN1-219ENST00000530495 TBC1D2Q9BYX2 928 aa18.42■□□□□ 0.54
CAPN1-219ENST00000530495 PNMA3Q9UL41 463 aa18.42■□□□□ 0.54
CAPN1-219ENST00000530495 NR2E3Q9Y5X4 410 aa18.42■□□□□ 0.54
CAPN1-219ENST00000530495 FAM196BA6NMK8 535 aa18.41■□□□□ 0.54
CAPN1-219ENST00000530495 FARP2O94887 1054 aaPredicted RBP18.41■□□□□ 0.54
CAPN1-219ENST00000530495 CAP2P40123 477 aa18.41■□□□□ 0.54
CAPN1-219ENST00000530495 FAM110CQ1W6H9 321 aa18.41■□□□□ 0.54
CAPN1-219ENST00000530495 ZNF280CQ8ND82 737 aa18.41■□□□□ 0.54
CAPN1-219ENST00000530495 PRO3102Q9H379 93 aa18.41■□□□□ 0.54
CAPN1-219ENST00000530495 RAI14Q9P0K7 980 aa18.41■□□□□ 0.54
CAPN1-219ENST00000530495 ATAD5Q96QE3 1844 aa18.41■□□□□ 0.54
CAPN1-219ENST00000530495 IPO8O15397 1037 aaKnown RBP18.4■□□□□ 0.54
CAPN1-219ENST00000530495 TFRCP02786 760 aaKnown RBP18.4■□□□□ 0.54
CAPN1-219ENST00000530495 GNAI2P04899 355 aa18.4■□□□□ 0.54
CAPN1-219ENST00000530495 GCLCP48506 637 aaPredicted RBP18.4■□□□□ 0.54
CAPN1-219ENST00000530495 DEFB118Q96PH6 123 aa18.4■□□□□ 0.54
CAPN1-219ENST00000530495 PAK6Q9NQU5 681 aaPredicted RBP18.4■□□□□ 0.54
CAPN1-219ENST00000530495 LOC285556D6RIA3 1793 aa18.4■□□□□ 0.54
CAPN1-219ENST00000530495 TRIOBPQ9H2D6 2365 aa18.39■□□□□ 0.53
CAPN1-219ENST00000530495 ZBTB7BO15156 539 aaPredicted RBP18.39■□□□□ 0.53
CAPN1-219ENST00000530495 UQCRFS1P1P0C7P4 283 aa18.39■□□□□ 0.53
CAPN1-219ENST00000530495 MCAMP43121 646 aa18.39■□□□□ 0.53
CAPN1-219ENST00000530495 G3BP1Q13283 466 aaKnown RBP eCLIP18.39■□□□□ 0.53
CAPN1-219ENST00000530495 RRP1BQ14684 758 aaKnown RBP18.39■□□□□ 0.53
CAPN1-219ENST00000530495 CRISPLD2Q9H0B8 497 aa18.39■□□□□ 0.53
CAPN1-219ENST00000530495 HERC5Q9UII4 1024 aaKnown RBP18.39■□□□□ 0.53
CAPN1-219ENST00000530495 PNMA6EA0A0J9YXQ4 647 aa18.38■□□□□ 0.53
CAPN1-219ENST00000530495 USP17L5A8MUK1 530 aa18.38■□□□□ 0.53
CAPN1-219ENST00000530495 TRIM27P14373 513 aa18.38■□□□□ 0.53
CAPN1-219ENST00000530495 HMGCS2P54868 508 aa18.38■□□□□ 0.53
CAPN1-219ENST00000530495 PABPC4Q13310 644 aaKnown RBP eCLIP18.38■□□□□ 0.53
CAPN1-219ENST00000530495 SH3D19Q5HYK7 790 aa18.38■□□□□ 0.53
CAPN1-219ENST00000530495 TEX11Q8IYF3 940 aa18.38■□□□□ 0.53
CAPN1-219ENST00000530495 LRP2BPQ9P2M1 347 aa18.38■□□□□ 0.53
CAPN1-219ENST00000530495 PI4KBQ9UBF8 816 aa18.38■□□□□ 0.53
CAPN1-219ENST00000530495 ATF7IPQ6VMQ6 1270 aa18.37■□□□□ 0.53
CAPN1-219ENST00000530495 SH3RF3Q8TEJ3 882 aaPredicted RBP18.37■□□□□ 0.53
CAPN1-219ENST00000530495 ASCC2Q9H1I8 757 aaPredicted RBP18.37■□□□□ 0.53
CAPN1-219ENST00000530495 DHX36Q9H2U1 1008 aaKnown RBP18.37■□□□□ 0.53
CAPN1-219ENST00000530495 AS3MTQ9HBK9 375 aa18.37■□□□□ 0.53
CAPN1-219ENST00000530495 GJD2Q9UKL4 321 aa18.37■□□□□ 0.53
CAPN1-219ENST00000530495 EVI5O60447 810 aa18.36■□□□□ 0.53
CAPN1-219ENST00000530495 NOL10Q9BSC4 688 aaKnown RBP18.36■□□□□ 0.53
CAPN1-219ENST00000530495 WDR18Q9BV38 432 aa18.36■□□□□ 0.53
CAPN1-219ENST00000530495 GPR108Q9NPR9 543 aa18.36■□□□□ 0.53
CAPN1-219ENST00000530495 TAOK2Q9UL54 1235 aa18.36■□□□□ 0.53
CAPN1-219ENST00000530495 BAG3O95817 575 aa18.35■□□□□ 0.53
CAPN1-219ENST00000530495 PLCG2P16885 1265 aa18.35■□□□□ 0.53
CAPN1-219ENST00000530495 PPP4CP60510 307 aa18.35■□□□□ 0.53
CAPN1-219ENST00000530495 TNNQ9UQP3 1299 aa18.35■□□□□ 0.53
CAPN1-219ENST00000530495 CCER2I3L3R5 266 aa18.34■□□□□ 0.53
CAPN1-219ENST00000530495 BCAR3O75815 825 aa18.34■□□□□ 0.53
CAPN1-219ENST00000530495 NAA16Q6N069 864 aaPredicted RBP18.34■□□□□ 0.53
CAPN1-219ENST00000530495 METTL16Q86W50 562 aaKnown RBP18.34■□□□□ 0.53
CAPN1-219ENST00000530495 FOXP4Q8IVH2 680 aaPredicted RBP18.34■□□□□ 0.53
CAPN1-219ENST00000530495 FRAT1Q92837 279 aaPredicted RBP18.34■□□□□ 0.53
CAPN1-219ENST00000530495 PAWRQ96IZ0 340 aaKnown RBP18.34■□□□□ 0.53
CAPN1-219ENST00000530495 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.34■□□□□ 0.53
CAPN1-219ENST00000530495 AATFQ9NY61 560 aaKnown RBP eCLIP18.34■□□□□ 0.53
CAPN1-219ENST00000530495 MORF4L1Q9UBU8 362 aa18.34■□□□□ 0.53
CAPN1-219ENST00000530495 SIPA1L1O43166 1804 aa18.34■□□□□ 0.53
CAPN1-219ENST00000530495 CDK5RAP2Q96SN8 1893 aa18.33■□□□□ 0.53
CAPN1-219ENST00000530495 A0A1W2PPC1 479 aa18.33■□□□□ 0.52
CAPN1-219ENST00000530495 IGSF3O75054 1194 aa18.33■□□□□ 0.52
CAPN1-219ENST00000530495 HMGCRP04035 888 aa18.33■□□□□ 0.52
CAPN1-219ENST00000530495 ASNSP08243 561 aa18.33■□□□□ 0.52
CAPN1-219ENST00000530495 HOXA7P31268 230 aaPredicted RBP18.33■□□□□ 0.52
CAPN1-219ENST00000530495 BACE1P56817 501 aa18.33■□□□□ 0.52
CAPN1-219ENST00000530495 POLA2Q14181 598 aa18.33■□□□□ 0.52
CAPN1-219ENST00000530495 CCDC158Q5M9N0 1113 aa18.33■□□□□ 0.52
CAPN1-219ENST00000530495 NECAB2Q7Z6G3 386 aa18.33■□□□□ 0.52
CAPN1-219ENST00000530495 ANKLE1Q8NAG6 615 aa18.33■□□□□ 0.52
CAPN1-219ENST00000530495 CLUAP1Q96AJ1 413 aa18.33■□□□□ 0.52
CAPN1-219ENST00000530495 SNRKQ9NRH2 765 aa18.33■□□□□ 0.52
CAPN1-219ENST00000530495 PLXNB2O15031 1838 aa18.33■□□□□ 0.52
CAPN1-219ENST00000530495 FOCADQ5VW36 1801 aa18.33■□□□□ 0.52
CAPN1-219ENST00000530495 RPTORQ8N122 1335 aa18.32■□□□□ 0.52
CAPN1-219ENST00000530495 C19orf81C9J6K1 198 aa18.32■□□□□ 0.52
CAPN1-219ENST00000530495 CYP2E1P05181 493 aaPredicted RBP18.32■□□□□ 0.52
CAPN1-219ENST00000530495 JAG1P78504 1218 aa18.32■□□□□ 0.52
CAPN1-219ENST00000530495 MTMR2Q13614 643 aa18.32■□□□□ 0.52
CAPN1-219ENST00000530495 TNNI3KQ59H18 835 aa18.32■□□□□ 0.52
CAPN1-219ENST00000530495 TTC39AQ5SRH9 613 aa18.32■□□□□ 0.52
CAPN1-219ENST00000530495 ADGRA1Q86SQ6 560 aa18.32■□□□□ 0.52
CAPN1-219ENST00000530495 TGFBRAP1Q8WUH2 860 aa18.32■□□□□ 0.52
CAPN1-219ENST00000530495 ZNF512BQ96KM6 892 aaPredicted RBP18.32■□□□□ 0.52
CAPN1-219ENST00000530495 HMX1Q9NP08 348 aaPredicted RBP18.32■□□□□ 0.52
CAPN1-219ENST00000530495 GINM1Q9NU53 330 aa18.32■□□□□ 0.52
CAPN1-219ENST00000530495 FPGT-TNNI3KV9GXZ4 949 aa18.32■□□□□ 0.52
CAPN1-219ENST00000530495 ALPK3Q96L96 1907 aa18.31■□□□□ 0.52
CAPN1-219ENST00000530495 RANBP2P49792 3224 aaKnown RBP18.31■□□□□ 0.52
CAPN1-219ENST00000530495 MYO5AQ9Y4I1 1855 aaKnown RBP18.31■□□□□ 0.52
CAPN1-219ENST00000530495 ATP8B2P98198 1209 aa18.31■□□□□ 0.52
CAPN1-219ENST00000530495 SSH3Q8TE77 659 aa18.31■□□□□ 0.52
CAPN1-219ENST00000530495 P2RX7Q99572 595 aaKnown RBP18.31■□□□□ 0.52
CAPN1-219ENST00000530495 DBNDD2Q9BQY9 259 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms