RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 AMOTL1Q8IY63 956 aa12.65□□□□□ -0.39
SOX6-213ENST00000530378 L3MBTL3Q96JM7 780 aaPredicted RBP12.65□□□□□ -0.39
SOX6-213ENST00000530378 ADARB2Q9NS39 739 aaKnown RBP12.65□□□□□ -0.39
SOX6-213ENST00000530378 EPHX2P34913 555 aa12.64□□□□□ -0.39
SOX6-213ENST00000530378 GIMAP6Q6P9H5 292 aa12.64□□□□□ -0.39
SOX6-213ENST00000530378 IDI2Q9BXS1 227 aa12.64□□□□□ -0.39
SOX6-213ENST00000530378 LRRC2Q9BYS8 371 aa12.64□□□□□ -0.39
SOX6-213ENST00000530378 B4E1Z4 1266 aa12.63□□□□□ -0.39
SOX6-213ENST00000530378 EPB41L2O43491 1005 aaKnown RBP12.63□□□□□ -0.39
SOX6-213ENST00000530378 C12orf60Q5U649 245 aa12.63□□□□□ -0.39
SOX6-213ENST00000530378 PRAMEF18Q5VWM3 479 aa12.63□□□□□ -0.39
SOX6-213ENST00000530378 KCNB2Q92953 911 aa12.63□□□□□ -0.39
SOX6-213ENST00000530378 POTECB2RU33 542 aa12.62□□□□□ -0.39
SOX6-213ENST00000530378 POTEIP0CG38 1075 aa12.62□□□□□ -0.39
SOX6-213ENST00000530378 POTEJP0CG39 1038 aa12.62□□□□□ -0.39
SOX6-213ENST00000530378 ANAPC15P60006 121 aa12.62□□□□□ -0.39
SOX6-213ENST00000530378 MFSD6Q6ZSS7 791 aa12.62□□□□□ -0.39
SOX6-213ENST00000530378 CSRNP1Q96S65 589 aa12.62□□□□□ -0.39
SOX6-213ENST00000530378 LARP6Q9BRS8 491 aaKnown RBP12.62□□□□□ -0.39
SOX6-213ENST00000530378 RRAGCQ9HB90 399 aa12.62□□□□□ -0.39
SOX6-213ENST00000530378 NMRK2Q9NPI5 230 aa12.62□□□□□ -0.39
SOX6-213ENST00000530378 NEK4P51957 841 aa12.62□□□□□ -0.39
SOX6-213ENST00000530378 RASA3Q14644 834 aa12.62□□□□□ -0.39
SOX6-213ENST00000530378 SBK1Q52WX2 424 aa12.62□□□□□ -0.39
SOX6-213ENST00000530378 AKNAD1Q5T1N1 836 aa12.62□□□□□ -0.39
SOX6-213ENST00000530378 RALYLQ86SE5 291 aaKnown RBP12.62□□□□□ -0.39
SOX6-213ENST00000530378 TAF1DQ9H5J8 278 aaPredicted RBP12.62□□□□□ -0.39
SOX6-213ENST00000530378 ADM5C9JUS6 153 aa12.61□□□□□ -0.39
SOX6-213ENST00000530378 RANBP6O60518 1105 aaKnown RBP12.61□□□□□ -0.39
SOX6-213ENST00000530378 KDM4AO75164 1064 aa12.61□□□□□ -0.39
SOX6-213ENST00000530378 ENTPD3O75355 529 aa12.61□□□□□ -0.39
SOX6-213ENST00000530378 CD2BP2O95400 341 aaKnown RBP12.61□□□□□ -0.39
SOX6-213ENST00000530378 HLA-DOAP06340 250 aa12.61□□□□□ -0.39
SOX6-213ENST00000530378 FAM47AQ5JRC9 791 aa12.61□□□□□ -0.39
SOX6-213ENST00000530378 BLOC1S2Q6QNY1 142 aa12.61□□□□□ -0.39
SOX6-213ENST00000530378 CRACR2BQ8N4Y2 399 aaPredicted RBP12.61□□□□□ -0.39
SOX6-213ENST00000530378 STAG1Q8WVM7 1258 aa12.61□□□□□ -0.39
SOX6-213ENST00000530378 NEK1Q96PY6 1258 aa12.61□□□□□ -0.39
SOX6-213ENST00000530378 ZKSCAN3Q9BRR0 538 aa12.61□□□□□ -0.39
SOX6-213ENST00000530378 ROBO3Q96MS0 1386 aa12.61□□□□□ -0.39
SOX6-213ENST00000530378 IQCA1LA6NCM1 817 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 TRDNQ13061 729 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 KRT32Q14532 448 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 SHROOM1Q2M3G4 852 aaPredicted RBP12.6□□□□□ -0.39
SOX6-213ENST00000530378 CYB5R4Q7L1T6 521 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 MIGA2Q7L4E1 593 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 TTC6Q86TZ1 520 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 FAM151AQ8WW52 585 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 DEFB129Q9H1M3 183 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 DNAJC18Q9H819 358 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 GPHNQ9NQX3 736 aaPredicted RBP12.6□□□□□ -0.39
SOX6-213ENST00000530378 ANAPC4Q9UJX5 808 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 FZD1Q9UP38 647 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 CLEC11AQ9Y240 323 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 CYP46A1Q9Y6A2 500 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 SLC3A2P08195 630 aaKnown RBP12.6□□□□□ -0.39
SOX6-213ENST00000530378 TNNI2P48788 182 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 CDK8P49336 464 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 MMP14P50281 582 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 TNFAIP1Q13829 316 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 RABEP1Q15276 862 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 APOBEC3FQ8IUX4 373 aaKnown RBP12.6□□□□□ -0.39
SOX6-213ENST00000530378 MB21D2Q8IYB1 491 aaPredicted RBP12.6□□□□□ -0.39
SOX6-213ENST00000530378 NCOA7Q8NI08 942 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 TRIM34Q9BYJ4 488 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 MKNK2Q9HBH9 465 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 SERPINB13Q9UIV8 391 aa12.6□□□□□ -0.39
SOX6-213ENST00000530378 ATRNL1Q5VV63 1379 aa12.59□□□□□ -0.39
SOX6-213ENST00000530378 NMT2O60551 498 aa12.59□□□□□ -0.39
SOX6-213ENST00000530378 CAPN15O75808 1086 aa12.59□□□□□ -0.39
SOX6-213ENST00000530378 HSPA6P17066 643 aa12.59□□□□□ -0.39
SOX6-213ENST00000530378 RPS6KB1P23443 525 aa12.59□□□□□ -0.39
SOX6-213ENST00000530378 PSMA5P28066 241 aa12.59□□□□□ -0.39
SOX6-213ENST00000530378 ANP32AP39687 249 aaKnown RBP12.59□□□□□ -0.39
SOX6-213ENST00000530378 ANTXR2P58335 489 aa12.59□□□□□ -0.39
SOX6-213ENST00000530378 PDE4BQ07343 736 aa12.59□□□□□ -0.39
SOX6-213ENST00000530378 TSGA10IPQ3SY00 556 aa12.59□□□□□ -0.39
SOX6-213ENST00000530378 C16orf86Q6ZW13 317 aa12.59□□□□□ -0.39
SOX6-213ENST00000530378 RUFY3Q7L099 469 aa12.59□□□□□ -0.39
SOX6-213ENST00000530378 RNF41Q9H4P4 317 aaPredicted RBP12.59□□□□□ -0.39
SOX6-213ENST00000530378 ZSWIM6Q9HCJ5 1215 aa12.59□□□□□ -0.39
SOX6-213ENST00000530378 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.59□□□□□ -0.39
SOX6-213ENST00000530378 ATAD5Q96QE3 1844 aa12.59□□□□□ -0.39
SOX6-213ENST00000530378 COL2A1P02458 1487 aaPredicted RBP12.59□□□□□ -0.39
SOX6-213ENST00000530378 PRC1O43663 620 aa12.58□□□□□ -0.4
SOX6-213ENST00000530378 SHMT1P34896 483 aa12.58□□□□□ -0.4
SOX6-213ENST00000530378 PRKG1Q13976 671 aa12.58□□□□□ -0.4
SOX6-213ENST00000530378 NBPF12Q5TAG4 269 aaPredicted RBP12.58□□□□□ -0.4
SOX6-213ENST00000530378 FKBP1CQ5VVH2 108 aa12.58□□□□□ -0.4
SOX6-213ENST00000530378 USP50Q70EL3 339 aaPredicted RBP12.58□□□□□ -0.4
SOX6-213ENST00000530378 FAM83AQ86UY5 434 aa12.58□□□□□ -0.4
SOX6-213ENST00000530378 CLEC10AQ8IUN9 316 aa12.58□□□□□ -0.4
SOX6-213ENST00000530378 DCPSQ96C86 337 aaKnown RBP12.58□□□□□ -0.4
SOX6-213ENST00000530378 TEPSINQ96N21 525 aa12.58□□□□□ -0.4
SOX6-213ENST00000530378 DHX36Q9H2U1 1008 aaKnown RBP12.58□□□□□ -0.4
SOX6-213ENST00000530378 PDRG1Q9NUG6 133 aa12.58□□□□□ -0.4
SOX6-213ENST00000530378 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.58□□□□□ -0.4
SOX6-213ENST00000530378 MPHOSPH10O00566 681 aaKnown RBP12.58□□□□□ -0.4
SOX6-213ENST00000530378 GDF11O95390 407 aa12.58□□□□□ -0.4
SOX6-213ENST00000530378 RASA1P20936 1047 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms