RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 FAM83AQ86UY5 434 aa17.01■□□□□ 0.31
TTC39A-216ENST00000530004 APOBEC3FQ8IUX4 373 aaKnown RBP17.01■□□□□ 0.31
TTC39A-216ENST00000530004 TBC1D10CQ8IV04 446 aa17.01■□□□□ 0.31
TTC39A-216ENST00000530004 INTS4Q96HW7 963 aaKnown RBP17.01■□□□□ 0.31
TTC39A-216ENST00000530004 ZSCAN31Q96LW9 406 aaPredicted RBP17.01■□□□□ 0.31
TTC39A-216ENST00000530004 NBPF3Q9H094 633 aa17.01■□□□□ 0.31
TTC39A-216ENST00000530004 CWC22Q9HCG8 908 aaKnown RBP17.01■□□□□ 0.31
TTC39A-216ENST00000530004 SCAF8Q9UPN6 1271 aaKnown RBP17.01■□□□□ 0.31
TTC39A-216ENST00000530004 LAMA4Q16363 1823 aa17.01■□□□□ 0.31
TTC39A-216ENST00000530004 LARGE1O95461 756 aa17■□□□□ 0.31
TTC39A-216ENST00000530004 ZFPM1Q8IX07 1006 aa17■□□□□ 0.31
TTC39A-216ENST00000530004 DCPSQ96C86 337 aaKnown RBP17■□□□□ 0.31
TTC39A-216ENST00000530004 OSBPL5Q9H0X9 879 aaPredicted RBP17■□□□□ 0.31
TTC39A-216ENST00000530004 SH2B1Q9NRF2 756 aaPredicted RBP17■□□□□ 0.31
TTC39A-216ENST00000530004 TPCN1Q9ULQ1 816 aa17■□□□□ 0.31
TTC39A-216ENST00000530004 CNTNAP1P78357 1384 aa17■□□□□ 0.31
TTC39A-216ENST00000530004 TNNI2P48788 182 aa17■□□□□ 0.31
TTC39A-216ENST00000530004 EXOSC10Q01780 885 aaKnown RBP17■□□□□ 0.31
TTC39A-216ENST00000530004 RASA3Q14644 834 aa17■□□□□ 0.31
TTC39A-216ENST00000530004 RALYLQ86SE5 291 aaKnown RBP17■□□□□ 0.31
TTC39A-216ENST00000530004 NCOA7Q8NI08 942 aa17■□□□□ 0.31
TTC39A-216ENST00000530004 FAM151AQ8WW52 585 aa17■□□□□ 0.31
TTC39A-216ENST00000530004 LRRC2Q9BYS8 371 aa17■□□□□ 0.31
TTC39A-216ENST00000530004 MCM9Q9NXL9 1143 aa17■□□□□ 0.31
TTC39A-216ENST00000530004 FGD1P98174 961 aa16.99■□□□□ 0.31
TTC39A-216ENST00000530004 TRDNQ13061 729 aa16.99■□□□□ 0.31
TTC39A-216ENST00000530004 ME3Q16798 604 aa16.99■□□□□ 0.31
TTC39A-216ENST00000530004 LDHDQ86WU2 507 aa16.99■□□□□ 0.31
TTC39A-216ENST00000530004 DEFB129Q9H1M3 183 aa16.99■□□□□ 0.31
TTC39A-216ENST00000530004 CLEC11AQ9Y240 323 aa16.99■□□□□ 0.31
TTC39A-216ENST00000530004 CHST3Q7LGC8 479 aa16.98■□□□□ 0.31
TTC39A-216ENST00000530004 SULF1Q8IWU6 871 aa16.98■□□□□ 0.31
TTC39A-216ENST00000530004 MB21D2Q8IYB1 491 aaPredicted RBP16.98■□□□□ 0.31
TTC39A-216ENST00000530004 TMEM39BQ9GZU3 492 aa16.98■□□□□ 0.31
TTC39A-216ENST00000530004 ECM29Q5VYK3 1845 aa16.98■□□□□ 0.31
TTC39A-216ENST00000530004 USP17L12C9JPN9 530 aa16.97■□□□□ 0.31
TTC39A-216ENST00000530004 USP17L21D6R901 530 aa16.97■□□□□ 0.31
TTC39A-216ENST00000530004 CTDSPL2Q05D32 466 aa16.97■□□□□ 0.31
TTC39A-216ENST00000530004 CTR9Q6PD62 1173 aa16.97■□□□□ 0.31
TTC39A-216ENST00000530004 SH3BP5LQ7L8J4 393 aa16.97■□□□□ 0.31
TTC39A-216ENST00000530004 CCDC83Q8IWF9 413 aa16.97■□□□□ 0.31
TTC39A-216ENST00000530004 BRF1Q92994 677 aa16.97■□□□□ 0.31
TTC39A-216ENST00000530004 DHX36Q9H2U1 1008 aaKnown RBP16.97■□□□□ 0.31
TTC39A-216ENST00000530004 ARPP21Q9UBL0 812 aaPredicted RBP16.97■□□□□ 0.31
TTC39A-216ENST00000530004 SAP30BPQ9UHR5 308 aaKnown RBP16.97■□□□□ 0.31
TTC39A-216ENST00000530004 DDTLA6NHG4 134 aaPredicted RBP16.97■□□□□ 0.31
TTC39A-216ENST00000530004 KIF3CO14782 793 aa16.97■□□□□ 0.31
TTC39A-216ENST00000530004 MCM5P33992 734 aa16.97■□□□□ 0.31
TTC39A-216ENST00000530004 KRT26Q7Z3Y9 468 aa16.97■□□□□ 0.31
TTC39A-216ENST00000530004 ZNF784Q8NCA9 323 aaPredicted RBP16.97■□□□□ 0.31
TTC39A-216ENST00000530004 AGXT2Q9BYV1 514 aa16.97■□□□□ 0.31
TTC39A-216ENST00000530004 PPP2R3BQ9Y5P8 575 aa16.97■□□□□ 0.31
TTC39A-216ENST00000530004 ATRNL1Q5VV63 1379 aa16.96■□□□□ 0.31
TTC39A-216ENST00000530004 COL2A1P02458 1487 aaPredicted RBP16.96■□□□□ 0.31
TTC39A-216ENST00000530004 NEDD4P46934 1319 aa16.96■□□□□ 0.31
TTC39A-216ENST00000530004 MINDY4BA8MYZ0 360 aa16.96■□□□□ 0.31
TTC39A-216ENST00000530004 PRC1O43663 620 aa16.96■□□□□ 0.31
TTC39A-216ENST00000530004 POLR3DP05423 398 aaPredicted RBP16.96■□□□□ 0.31
TTC39A-216ENST00000530004 PPARAQ07869 468 aa16.96■□□□□ 0.31
TTC39A-216ENST00000530004 SLC4A8Q2Y0W8 1093 aa16.96■□□□□ 0.31
TTC39A-216ENST00000530004 SBK1Q52WX2 424 aa16.96■□□□□ 0.31
TTC39A-216ENST00000530004 AKNAD1Q5T1N1 836 aa16.96■□□□□ 0.31
TTC39A-216ENST00000530004 MAP1SQ66K74 1059 aaPredicted RBP16.96■□□□□ 0.31
TTC39A-216ENST00000530004 CDC37L1Q7L3B6 337 aa16.96■□□□□ 0.31
TTC39A-216ENST00000530004 ZSCAN29Q8IWY8 852 aaPredicted RBP16.96■□□□□ 0.31
TTC39A-216ENST00000530004 NECAB1Q8N987 351 aa16.96■□□□□ 0.31
TTC39A-216ENST00000530004 TEPSINQ96N21 525 aa16.96■□□□□ 0.31
TTC39A-216ENST00000530004 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.96■□□□□ 0.31
TTC39A-216ENST00000530004 B4E1Z4 1266 aa16.95■□□□□ 0.3
TTC39A-216ENST00000530004 ADM5C9JUS6 153 aa16.95■□□□□ 0.3
TTC39A-216ENST00000530004 PLCD1P51178 756 aa16.95■□□□□ 0.3
TTC39A-216ENST00000530004 ST3GAL1Q11201 340 aa16.95■□□□□ 0.3
TTC39A-216ENST00000530004 C12orf60Q5U649 245 aa16.95■□□□□ 0.3
TTC39A-216ENST00000530004 TTC6Q86TZ1 520 aa16.95■□□□□ 0.3
TTC39A-216ENST00000530004 CDAN1Q8IWY9 1227 aa16.95■□□□□ 0.3
TTC39A-216ENST00000530004 AMOTL1Q8IY63 956 aa16.95■□□□□ 0.3
TTC39A-216ENST00000530004 INCENPQ9NQS7 918 aa16.95■□□□□ 0.3
TTC39A-216ENST00000530004 FOCADQ5VW36 1801 aa16.95■□□□□ 0.3
TTC39A-216ENST00000530004 CDK5RAP2Q96SN8 1893 aa16.95■□□□□ 0.3
TTC39A-216ENST00000530004 CYP2D7A0A087X1C5 515 aa16.94■□□□□ 0.3
TTC39A-216ENST00000530004 CYP2D6P10635 497 aa16.94■□□□□ 0.3
TTC39A-216ENST00000530004 ANTXR2P58335 489 aa16.94■□□□□ 0.3
TTC39A-216ENST00000530004 EVX2Q03828 476 aa16.94■□□□□ 0.3
TTC39A-216ENST00000530004 NBR1Q14596 966 aa16.94■□□□□ 0.3
TTC39A-216ENST00000530004 MFSD6Q6ZSS7 791 aa16.94■□□□□ 0.3
TTC39A-216ENST00000530004 USP48Q86UV5 1035 aa16.94■□□□□ 0.3
TTC39A-216ENST00000530004 FBXL16Q8N461 479 aa16.94■□□□□ 0.3
TTC39A-216ENST00000530004 STAG1Q8WVM7 1258 aa16.94■□□□□ 0.3
TTC39A-216ENST00000530004 CSRNP1Q96S65 589 aa16.94■□□□□ 0.3
TTC39A-216ENST00000530004 GLIS2Q9BZE0 524 aaPredicted RBP16.94■□□□□ 0.3
TTC39A-216ENST00000530004 CNNM2Q9H8M5 875 aa16.94■□□□□ 0.3
TTC39A-216ENST00000530004 ANAPC4Q9UJX5 808 aa16.94■□□□□ 0.3
TTC39A-216ENST00000530004 WDR19Q8NEZ3 1342 aa16.94■□□□□ 0.3
TTC39A-216ENST00000530004 SMIM22K7EJ46 135 aa16.94■□□□□ 0.3
TTC39A-216ENST00000530004 HLA-DOAP06340 250 aa16.94■□□□□ 0.3
TTC39A-216ENST00000530004 NUCB2P80303 420 aa16.94■□□□□ 0.3
TTC39A-216ENST00000530004 APOBRQ0VD83 1088 aa16.94■□□□□ 0.3
TTC39A-216ENST00000530004 STK3Q13188 491 aa16.94■□□□□ 0.3
TTC39A-216ENST00000530004 RAB3GAP1Q15042 981 aa16.94■□□□□ 0.3
TTC39A-216ENST00000530004 NFKBIBQ15653 356 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms