RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 NLRC3Q7RTR2 1065 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 AFAP1L2Q8N4X5 818 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 KLHL6Q8WZ60 621 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 EXOC2Q96KP1 924 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 CLUHP3Q96NS8 147 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 TRERF1Q96PN7 1200 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 CNNM2Q9H8M5 875 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 PCDHB10Q9UN67 800 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 CORINQ9Y5Q5 1042 aa4.75□□□□□ -1.65
AMBRA1-208ENST00000529558 DNAJC25-GNG10A0A024R161 153 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 EYA4O95677 639 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 PTPRAP18433 802 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 EIF2AK2P19525 551 aaKnown RBP4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 GNALP38405 381 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 CCNFP41002 786 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 GUCY2FP51841 1108 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 SLC7A5Q01650 507 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 INPP5AQ14642 412 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 PPP2R5AQ15172 486 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 MAP9Q49MG5 647 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 OVOS1Q6IE37 1185 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 TMED8Q6PL24 325 aaPredicted RBP4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 TRIM46Q7Z4K8 759 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 WDR75Q8IWA0 830 aaKnown RBP4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 ATL2Q8NHH9 583 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 ABHD17AQ96GS6 310 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 ZFP42Q96MM3 310 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 RPS6KC1Q96S38 1066 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 SLC9A7Q96T83 725 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 APBA2Q99767 749 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 SPOCK3Q9BQ16 436 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 IGFLR1Q9H665 355 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 DNAJB12Q9NXW2 375 aaKnown RBP4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 REV1Q9UBZ9 1251 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 ZNF214Q9UL59 606 aaPredicted RBP4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 PCDHA4Q9UN74 947 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 TACC3Q9Y6A5 838 aa4.74□□□□□ -1.65
AMBRA1-208ENST00000529558 A0A1W2PQU0 124 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 SOX1O00570 391 aaPredicted RBP4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 DNAJA2O60884 412 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 BMP1P13497 986 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 PLCG1P19174 1290 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 MCL1Q07820 350 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 UBE4AQ14139 1066 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 IKBKEQ14164 716 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 GNPTABQ3T906 1256 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 FAM209AQ5JX71 171 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 WIPI1Q5MNZ9 446 aaPredicted RBP4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 TMEM201Q5SNT2 666 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 WWC2Q6AWC2 1192 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 LRFN4Q6PJG9 635 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 DDX46Q7L014 1031 aaKnown RBP4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 HDXQ7Z353 690 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 LRRTM3Q86VH5 581 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 SCUBE1Q8IWY4 988 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 TRIM22Q8IYM9 498 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 FAM9AQ8IZU1 332 aaPredicted RBP4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 MICALL1Q8N3F8 863 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 GPBAR1Q8TDU6 330 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 PLPPR2Q96GM1 343 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 CDC6Q99741 560 aa4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 TARS2Q9BW92 718 aaKnown RBP4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 INTS7Q9NVH2 962 aaKnown RBP4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 ATXN7L1Q9ULK2 861 aaPredicted RBP4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 MRPS23Q9Y3D9 190 aaKnown RBP4.73□□□□□ -1.65
AMBRA1-208ENST00000529558 TRBV23-1A0A0A0MS06 115 aa4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 SLC35F4A4IF30 521 aa4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 AGRPO00253 132 aa4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 CAND2O75155 1236 aa4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 RASGRP1O95267 797 aa4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 ARAFP10398 606 aa4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 CPEP16870 476 aa4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 SDSP20132 328 aa4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 ZNF143P52747 638 aaPredicted RBP4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 AXDND1Q5T1B0 1012 aaPredicted RBP4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 STRA8Q7Z7C7 330 aa4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 FAM35AQ86V20 835 aa4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 DDX1Q92499 740 aaKnown RBP4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 GMCL1Q96IK5 515 aa4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 IPO9Q96P70 1041 aaKnown RBP4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 MRPL4Q9BYD3 311 aaKnown RBP4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 ASPSCR1Q9BZE9 553 aa4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 UBE2OQ9C0C9 1292 aaKnown RBP4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 ZC3H12CQ9C0D7 883 aaKnown RBP4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 SOX17Q9H6I2 414 aaPredicted RBP4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 ARHGEF4Q9NR80 690 aa4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 SH2B1Q9NRF2 756 aaPredicted RBP4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 PHLDB1Q86UU1 1377 aa4.72□□□□□ -1.65
AMBRA1-208ENST00000529558 TRAV20A0A0B4J274 112 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 A0A0G2JS52 829 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 FAM177BA6PVY3 158 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 SIN3BO75182 1162 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 KATNA1O75449 491 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 AVPP01185 164 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 CPB1P15086 417 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 FGFR3P22607 806 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 PDE4BQ07343 736 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 HSP90AA2PQ14568 343 aaPredicted RBP4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 LRRC41Q15345 812 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 SV2CQ496J9 727 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms