RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 CTNND1O60716 968 aaKnown RBP11.21□□□□□ -0.61
VPS11-203ENST00000529545 PRDX5P30044 214 aa11.21□□□□□ -0.61
VPS11-203ENST00000529545 RGS3P49796 1198 aa11.21□□□□□ -0.61
VPS11-203ENST00000529545 SLF2Q8IX21 1173 aa11.21□□□□□ -0.61
VPS11-203ENST00000529545 ZGPATQ8N5A5 531 aaKnown RBP11.21□□□□□ -0.61
VPS11-203ENST00000529545 EFCAB3Q8N7B9 438 aa11.21□□□□□ -0.61
VPS11-203ENST00000529545 LRCH3Q96II8 777 aa11.21□□□□□ -0.61
VPS11-203ENST00000529545 CRISPLD2Q9H0B8 497 aa11.21□□□□□ -0.61
VPS11-203ENST00000529545 PAK6Q9NQU5 681 aaPredicted RBP11.21□□□□□ -0.61
VPS11-203ENST00000529545 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.21□□□□□ -0.61
VPS11-203ENST00000529545 PNMA3Q9UL41 463 aa11.21□□□□□ -0.61
VPS11-203ENST00000529545 DENND2AQ9ULE3 1009 aa11.21□□□□□ -0.61
VPS11-203ENST00000529545 AFG3L2Q9Y4W6 797 aa11.21□□□□□ -0.61
VPS11-203ENST00000529545 PTPRCP08575 1304 aa11.2□□□□□ -0.62
VPS11-203ENST00000529545 TRIM75PA6NK02 468 aa11.2□□□□□ -0.62
VPS11-203ENST00000529545 PHF20L1A8MW92 1017 aa11.2□□□□□ -0.62
VPS11-203ENST00000529545 SOX1O00570 391 aaPredicted RBP11.2□□□□□ -0.62
VPS11-203ENST00000529545 SEMA3EO15041 775 aa11.2□□□□□ -0.62
VPS11-203ENST00000529545 BMP8BP34820 402 aa11.2□□□□□ -0.62
VPS11-203ENST00000529545 GPR153Q6NV75 609 aa11.2□□□□□ -0.62
VPS11-203ENST00000529545 ZFPM1Q8IX07 1006 aa11.2□□□□□ -0.62
VPS11-203ENST00000529545 C7orf61Q8IZ16 206 aa11.2□□□□□ -0.62
VPS11-203ENST00000529545 ANKRD13CQ8N6S4 541 aa11.2□□□□□ -0.62
VPS11-203ENST00000529545 ANKLE1Q8NAG6 615 aa11.2□□□□□ -0.62
VPS11-203ENST00000529545 IDI2Q9BXS1 227 aa11.2□□□□□ -0.62
VPS11-203ENST00000529545 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.2□□□□□ -0.62
VPS11-203ENST00000529545 CEP126Q9P2H0 1117 aa11.2□□□□□ -0.62
VPS11-203ENST00000529545 SALL1Q9NSC2 1324 aa11.19□□□□□ -0.62
VPS11-203ENST00000529545 HMGCRP04035 888 aa11.19□□□□□ -0.62
VPS11-203ENST00000529545 GCLCP48506 637 aaPredicted RBP11.19□□□□□ -0.62
VPS11-203ENST00000529545 PABPC4Q13310 644 aaKnown RBP eCLIP11.19□□□□□ -0.62
VPS11-203ENST00000529545 ATP2B3Q16720 1220 aa11.19□□□□□ -0.62
VPS11-203ENST00000529545 FAM110CQ1W6H9 321 aa11.19□□□□□ -0.62
VPS11-203ENST00000529545 DZIP1Q86YF9 867 aaKnown RBP11.19□□□□□ -0.62
VPS11-203ENST00000529545 DEFB123Q8N688 67 aa11.19□□□□□ -0.62
VPS11-203ENST00000529545 NBPF3Q9H094 633 aa11.19□□□□□ -0.62
VPS11-203ENST00000529545 AGTPBP1Q9UPW5 1226 aa11.19□□□□□ -0.62
VPS11-203ENST00000529545 MYH2Q9UKX2 1941 aa11.19□□□□□ -0.62
VPS11-203ENST00000529545 DOCK1Q14185 1865 aa11.19□□□□□ -0.62
VPS11-203ENST00000529545 RPTORQ8N122 1335 aa11.18□□□□□ -0.62
VPS11-203ENST00000529545 MAP3K10Q02779 954 aa11.18□□□□□ -0.62
VPS11-203ENST00000529545 SPTY2D1Q68D10 685 aaPredicted RBP11.18□□□□□ -0.62
VPS11-203ENST00000529545 PROCA1Q8NCQ7 364 aaPredicted RBP11.18□□□□□ -0.62
VPS11-203ENST00000529545 GDF15Q99988 308 aa11.18□□□□□ -0.62
VPS11-203ENST00000529545 USP44Q9H0E7 712 aa11.18□□□□□ -0.62
VPS11-203ENST00000529545 SIL1Q9H173 461 aa11.18□□□□□ -0.62
VPS11-203ENST00000529545 HMX1Q9NP08 348 aaPredicted RBP11.18□□□□□ -0.62
VPS11-203ENST00000529545 ZMYND8Q9ULU4 1186 aaPredicted RBP11.18□□□□□ -0.62
VPS11-203ENST00000529545 SZT2Q5T011 3432 aa11.18□□□□□ -0.62
VPS11-203ENST00000529545 PTPRFP10586 1907 aa11.17□□□□□ -0.62
VPS11-203ENST00000529545 ATRNL1Q5VV63 1379 aa11.17□□□□□ -0.62
VPS11-203ENST00000529545 CIAO1O76071 339 aa11.17□□□□□ -0.62
VPS11-203ENST00000529545 RFX5P48382 616 aaPredicted RBP11.17□□□□□ -0.62
VPS11-203ENST00000529545 PICALMQ13492 652 aa11.17□□□□□ -0.62
VPS11-203ENST00000529545 ATG9AQ7Z3C6 839 aa11.17□□□□□ -0.62
VPS11-203ENST00000529545 MRPL50Q8N5N7 158 aaKnown RBP11.17□□□□□ -0.62
VPS11-203ENST00000529545 DIS3LQ8TF46 1054 aaKnown RBP11.17□□□□□ -0.62
VPS11-203ENST00000529545 TBC1D2Q9BYX2 928 aa11.17□□□□□ -0.62
VPS11-203ENST00000529545 ABCF2Q9UG63 623 aa11.17□□□□□ -0.62
VPS11-203ENST00000529545 HDAC5Q9UQL6 1122 aa11.17□□□□□ -0.62
VPS11-203ENST00000529545 GAKO14976 1311 aa11.16□□□□□ -0.62
VPS11-203ENST00000529545 RANBP2P49792 3224 aaKnown RBP11.16□□□□□ -0.62
VPS11-203ENST00000529545 ALPK3Q96L96 1907 aa11.16□□□□□ -0.62
VPS11-203ENST00000529545 DDTLA6NHG4 134 aaPredicted RBP11.16□□□□□ -0.62
VPS11-203ENST00000529545 IL15P40933 162 aaPredicted RBP11.16□□□□□ -0.62
VPS11-203ENST00000529545 PHKA1P46020 1223 aa11.16□□□□□ -0.62
VPS11-203ENST00000529545 TREML2Q5T2D2 321 aa11.16□□□□□ -0.62
VPS11-203ENST00000529545 SH3BP5LQ7L8J4 393 aa11.16□□□□□ -0.62
VPS11-203ENST00000529545 TDHQ8IZJ6 230 aa11.16□□□□□ -0.62
VPS11-203ENST00000529545 C11orf49Q9H6J7 331 aa11.16□□□□□ -0.62
VPS11-203ENST00000529545 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.16□□□□□ -0.62
VPS11-203ENST00000529545 STXBP5LQ9Y2K9 1186 aa11.16□□□□□ -0.62
VPS11-203ENST00000529545 PHIPQ8WWQ0 1821 aa11.16□□□□□ -0.62
VPS11-203ENST00000529545 DOCK3Q8IZD9 2030 aa11.16□□□□□ -0.62
VPS11-203ENST00000529545 STK25O00506 426 aa11.15□□□□□ -0.62
VPS11-203ENST00000529545 ANP32CO43423 234 aa11.15□□□□□ -0.62
VPS11-203ENST00000529545 TBC1D12O60347 775 aa11.15□□□□□ -0.62
VPS11-203ENST00000529545 UBTFL1P0CB47 393 aaPredicted RBP11.15□□□□□ -0.62
VPS11-203ENST00000529545 BTDP43251 543 aa11.15□□□□□ -0.62
VPS11-203ENST00000529545 SPP2Q13103 211 aa11.15□□□□□ -0.62
VPS11-203ENST00000529545 LRIT3Q3SXY7 679 aa11.15□□□□□ -0.62
VPS11-203ENST00000529545 CCDC84Q86UT8 332 aaPredicted RBP11.15□□□□□ -0.62
VPS11-203ENST00000529545 ZNF280CQ8ND82 737 aa11.15□□□□□ -0.62
VPS11-203ENST00000529545 FAM163AQ96GL9 167 aaPredicted RBP11.15□□□□□ -0.62
VPS11-203ENST00000529545 UBE2OQ9C0C9 1292 aaKnown RBP11.15□□□□□ -0.62
VPS11-203ENST00000529545 OSBPL5Q9H0X9 879 aaPredicted RBP11.15□□□□□ -0.62
VPS11-203ENST00000529545 BOLA1Q9Y3E2 137 aa11.15□□□□□ -0.62
VPS11-203ENST00000529545 LDHCP07864 332 aa11.14□□□□□ -0.63
VPS11-203ENST00000529545 SYN1P17600 705 aa11.14□□□□□ -0.63
VPS11-203ENST00000529545 MAGEA10P43363 369 aaPredicted RBP11.14□□□□□ -0.63
VPS11-203ENST00000529545 HMGCS2P54868 508 aa11.14□□□□□ -0.63
VPS11-203ENST00000529545 CCDC102BQ68D86 513 aa11.14□□□□□ -0.63
VPS11-203ENST00000529545 Q7L0L9 218 aa11.14□□□□□ -0.63
VPS11-203ENST00000529545 ERICH6Q7L0X2 663 aa11.14□□□□□ -0.63
VPS11-203ENST00000529545 CCAR1Q8IX12 1150 aaKnown RBP11.14□□□□□ -0.63
VPS11-203ENST00000529545 ASCC2Q9H1I8 757 aaPredicted RBP11.14□□□□□ -0.63
VPS11-203ENST00000529545 AS3MTQ9HBK9 375 aa11.14□□□□□ -0.63
VPS11-203ENST00000529545 DDX4Q9NQI0 724 aaKnown RBP11.14□□□□□ -0.63
VPS11-203ENST00000529545 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.14□□□□□ -0.63
VPS11-203ENST00000529545 STK24Q9Y6E0 443 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms