RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 NAA16Q6N069 864 aaPredicted RBP31.73■■■□□ 2.67
TRIM3-206ENST00000528227 RAET1EQ8TD07 263 aa31.73■■■□□ 2.67
TRIM3-206ENST00000528227 ZNF512BQ96KM6 892 aaPredicted RBP31.73■■■□□ 2.67
TRIM3-206ENST00000528227 NOL10Q9BSC4 688 aaKnown RBP31.73■■■□□ 2.67
TRIM3-206ENST00000528227 ATAD5Q96QE3 1844 aa31.72■■■□□ 2.67
TRIM3-206ENST00000528227 CYP2E1P05181 493 aaPredicted RBP31.72■■■□□ 2.67
TRIM3-206ENST00000528227 AATFQ9NY61 560 aaKnown RBP eCLIP31.72■■■□□ 2.67
TRIM3-206ENST00000528227 GRK4P32298 578 aa31.71■■■□□ 2.67
TRIM3-206ENST00000528227 AGTPBP1Q9UPW5 1226 aa31.71■■■□□ 2.67
TRIM3-206ENST00000528227 BAG3O95817 575 aa31.7■■■□□ 2.67
TRIM3-206ENST00000528227 PRKCZQ05513 592 aa31.7■■■□□ 2.67
TRIM3-206ENST00000528227 MTFR1Q15390 333 aa31.7■■■□□ 2.67
TRIM3-206ENST00000528227 DIEXFQ68CQ4 756 aaKnown RBP31.7■■■□□ 2.67
TRIM3-206ENST00000528227 DBNLQ9UJU6 430 aaKnown RBP31.7■■■□□ 2.67
TRIM3-206ENST00000528227 SIPA1L1O43166 1804 aa31.7■■■□□ 2.66
TRIM3-206ENST00000528227 MYO5AQ9Y4I1 1855 aaKnown RBP31.69■■■□□ 2.66
TRIM3-206ENST00000528227 PLCG2P16885 1265 aa31.69■■■□□ 2.66
TRIM3-206ENST00000528227 CAP2P40123 477 aa31.69■■■□□ 2.66
TRIM3-206ENST00000528227 PPP4CP60510 307 aa31.69■■■□□ 2.66
TRIM3-206ENST00000528227 RRP1BQ14684 758 aaKnown RBP31.69■■■□□ 2.66
TRIM3-206ENST00000528227 ADGRA1Q86SQ6 560 aa31.69■■■□□ 2.66
TRIM3-206ENST00000528227 GCC1Q96CN9 775 aa31.69■■■□□ 2.66
TRIM3-206ENST00000528227 HERC5Q9UII4 1024 aaKnown RBP31.69■■■□□ 2.66
TRIM3-206ENST00000528227 CDK5RAP2Q96SN8 1893 aa31.69■■■□□ 2.66
TRIM3-206ENST00000528227 LOC285556D6RIA3 1793 aa31.68■■■□□ 2.66
TRIM3-206ENST00000528227 ZAP70P43403 619 aa31.68■■■□□ 2.66
TRIM3-206ENST00000528227 TREML2Q5T2D2 321 aa31.68■■■□□ 2.66
TRIM3-206ENST00000528227 SMCR8Q8TEV9 937 aaPredicted RBP31.68■■■□□ 2.66
TRIM3-206ENST00000528227 TBC1D2Q9BYX2 928 aa31.68■■■□□ 2.66
TRIM3-206ENST00000528227 DHX36Q9H2U1 1008 aaKnown RBP31.68■■■□□ 2.66
TRIM3-206ENST00000528227 TLR7Q9NYK1 1049 aaKnown RBP31.68■■■□□ 2.66
TRIM3-206ENST00000528227 PI4KBQ9UBF8 816 aa31.68■■■□□ 2.66
TRIM3-206ENST00000528227 FOCADQ5VW36 1801 aa31.68■■■□□ 2.66
TRIM3-206ENST00000528227 IGSF3O75054 1194 aa31.67■■■□□ 2.66
TRIM3-206ENST00000528227 SPP2Q13103 211 aa31.67■■■□□ 2.66
TRIM3-206ENST00000528227 PROCA1Q8NCQ7 364 aaPredicted RBP31.67■■■□□ 2.66
TRIM3-206ENST00000528227 ZNF280CQ8ND82 737 aa31.67■■■□□ 2.66
TRIM3-206ENST00000528227 EAF2Q96CJ1 260 aaPredicted RBP31.66■■■□□ 2.66
TRIM3-206ENST00000528227 CCDC8Q9H0W5 538 aaPredicted RBP31.66■■■□□ 2.66
TRIM3-206ENST00000528227 PIH1D3Q9NQM4 214 aaKnown RBP31.66■■■□□ 2.66
TRIM3-206ENST00000528227 GABRQQ9UN88 632 aa31.66■■■□□ 2.66
TRIM3-206ENST00000528227 ZBED9Q6R2W3 1325 aa31.66■■■□□ 2.66
TRIM3-206ENST00000528227 CEP85Q6P2H3 762 aa31.65■■■□□ 2.66
TRIM3-206ENST00000528227 TGFBRAP1Q8WUH2 860 aa31.65■■■□□ 2.66
TRIM3-206ENST00000528227 FLT1P17948 1338 aa31.65■■■□□ 2.66
TRIM3-206ENST00000528227 USP17L5A8MUK1 530 aa31.64■■■□□ 2.66
TRIM3-206ENST00000528227 MAPKAPK5Q8IW41 473 aa31.64■■■□□ 2.66
TRIM3-206ENST00000528227 SHISA4Q96DD7 197 aa31.64■■■□□ 2.66
TRIM3-206ENST00000528227 PNMA3Q9UL41 463 aa31.64■■■□□ 2.66
TRIM3-206ENST00000528227 SLAIN1Q8ND83 568 aa31.63■■■□□ 2.65
TRIM3-206ENST00000528227 CCL5P13501 91 aa31.62■■■□□ 2.65
TRIM3-206ENST00000528227 HMGCS2P54868 508 aa31.62■■■□□ 2.65
TRIM3-206ENST00000528227 ANKRD13CQ8N6S4 541 aa31.62■■■□□ 2.65
TRIM3-206ENST00000528227 TNPO2O14787 897 aaKnown RBP31.61■■■□□ 2.65
TRIM3-206ENST00000528227 UBXN2AP68543 259 aa31.61■■■□□ 2.65
TRIM3-206ENST00000528227 SH3D19Q5HYK7 790 aa31.61■■■□□ 2.65
TRIM3-206ENST00000528227 METTL16Q86W50 562 aaKnown RBP31.61■■■□□ 2.65
TRIM3-206ENST00000528227 PANK1Q8TE04 598 aa31.61■■■□□ 2.65
TRIM3-206ENST00000528227 DNAJC18Q9H819 358 aa31.61■■■□□ 2.65
TRIM3-206ENST00000528227 AS3MTQ9HBK9 375 aa31.61■■■□□ 2.65
TRIM3-206ENST00000528227 BIN2Q9UBW5 565 aaPredicted RBP31.61■■■□□ 2.65
TRIM3-206ENST00000528227 FLT3LGP49771 235 aa31.6■■■□□ 2.65
TRIM3-206ENST00000528227 FAM110CQ1W6H9 321 aa31.6■■■□□ 2.65
TRIM3-206ENST00000528227 NKX2-3Q8TAU0 364 aa31.6■■■□□ 2.65
TRIM3-206ENST00000528227 PALD1Q9ULE6 856 aa31.6■■■□□ 2.65
TRIM3-206ENST00000528227 GJB1P08034 283 aa31.59■■■□□ 2.65
TRIM3-206ENST00000528227 DYNLL1P63167 89 aaKnown RBP31.59■■■□□ 2.65
TRIM3-206ENST00000528227 FOXP4Q8IVH2 680 aaPredicted RBP31.59■■■□□ 2.65
TRIM3-206ENST00000528227 RNF208Q9H0X6 261 aa31.59■■■□□ 2.65
TRIM3-206ENST00000528227 EXOC6BQ9Y2D4 811 aa31.59■■■□□ 2.65
TRIM3-206ENST00000528227 ADCY3O60266 1144 aa31.58■■■□□ 2.65
TRIM3-206ENST00000528227 CYP7A1P22680 504 aa31.58■■■□□ 2.65
TRIM3-206ENST00000528227 GJA8P48165 433 aa31.58■■■□□ 2.65
TRIM3-206ENST00000528227 PABPC4Q13310 644 aaKnown RBP eCLIP31.58■■■□□ 2.65
TRIM3-206ENST00000528227 ERC1Q8IUD2 1116 aa31.58■■■□□ 2.65
TRIM3-206ENST00000528227 WDR18Q9BV38 432 aa31.58■■■□□ 2.65
TRIM3-206ENST00000528227 IDH1O75874 414 aaKnown RBP31.57■■■□□ 2.64
TRIM3-206ENST00000528227 ASNSP08243 561 aa31.57■■■□□ 2.64
TRIM3-206ENST00000528227 JAG1P78504 1218 aa31.57■■■□□ 2.64
TRIM3-206ENST00000528227 IRF5Q13568 498 aa31.57■■■□□ 2.64
TRIM3-206ENST00000528227 HABP4Q5JVS0 413 aaKnown RBP31.57■■■□□ 2.64
TRIM3-206ENST00000528227 CRACR2BQ8N4Y2 399 aaPredicted RBP31.57■■■□□ 2.64
TRIM3-206ENST00000528227 PXYLP1Q8TE99 480 aa31.57■■■□□ 2.64
TRIM3-206ENST00000528227 GCLCP48506 637 aaPredicted RBP31.56■■■□□ 2.64
TRIM3-206ENST00000528227 TRIM34Q9BYJ4 488 aa31.56■■■□□ 2.64
TRIM3-206ENST00000528227 ASCC2Q9H1I8 757 aaPredicted RBP31.56■■■□□ 2.64
TRIM3-206ENST00000528227 SAP30BPQ9UHR5 308 aaKnown RBP31.56■■■□□ 2.64
TRIM3-206ENST00000528227 NDUFB9Q9Y6M9 179 aa31.56■■■□□ 2.64
TRIM3-206ENST00000528227 ELNP15502 786 aa31.55■■■□□ 2.64
TRIM3-206ENST00000528227 MTMR2Q13614 643 aa31.55■■■□□ 2.64
TRIM3-206ENST00000528227 AACSQ86V21 672 aa31.55■■■□□ 2.64
TRIM3-206ENST00000528227 COA7Q96BR5 231 aa31.55■■■□□ 2.64
TRIM3-206ENST00000528227 UNC93B1Q9H1C4 597 aa31.55■■■□□ 2.64
TRIM3-206ENST00000528227 PCDH10Q9P2E7 1040 aa31.55■■■□□ 2.64
TRIM3-206ENST00000528227 HLA-DOAP06340 250 aa31.54■■■□□ 2.64
TRIM3-206ENST00000528227 BACE1P56817 501 aa31.54■■■□□ 2.64
TRIM3-206ENST00000528227 SHROOM1Q2M3G4 852 aaPredicted RBP31.54■■■□□ 2.64
TRIM3-206ENST00000528227 MAGEB6Q8N7X4 407 aa31.54■■■□□ 2.64
TRIM3-206ENST00000528227 MIGA1Q8NAN2 632 aa31.54■■■□□ 2.64
TRIM3-206ENST00000528227 ANTXR1Q9H6X2 564 aa31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms