RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 MIGA1Q8NAN2 632 aa20.98■□□□□ 0.95
LTBP3-208ENST00000527339 MS4A4AQ96JQ5 239 aa20.98■□□□□ 0.95
LTBP3-208ENST00000527339 OSBPL5Q9H0X9 879 aaPredicted RBP20.98■□□□□ 0.95
LTBP3-208ENST00000527339 STAP2Q9UGK3 403 aa20.98■□□□□ 0.95
LTBP3-208ENST00000527339 PTPN22Q9Y2R2 807 aa20.98■□□□□ 0.95
LTBP3-208ENST00000527339 KBTBD3Q8NAB2 608 aa20.97■□□□□ 0.95
LTBP3-208ENST00000527339 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.97■□□□□ 0.95
LTBP3-208ENST00000527339 ZNF341Q9BYN7 854 aa20.97■□□□□ 0.95
LTBP3-208ENST00000527339 ELP3Q9H9T3 547 aa20.97■□□□□ 0.95
LTBP3-208ENST00000527339 MAGEB6P1A0A0J9YX57 407 aa20.96■□□□□ 0.95
LTBP3-208ENST00000527339 DDTLA6NHG4 134 aaPredicted RBP20.96■□□□□ 0.95
LTBP3-208ENST00000527339 PDE1AP54750 535 aa20.96■□□□□ 0.95
LTBP3-208ENST00000527339 UBE3CQ15386 1083 aa20.96■□□□□ 0.95
LTBP3-208ENST00000527339 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.96■□□□□ 0.95
LTBP3-208ENST00000527339 SH3BP5LQ7L8J4 393 aa20.96■□□□□ 0.95
LTBP3-208ENST00000527339 TGFBRAP1Q8WUH2 860 aa20.96■□□□□ 0.95
LTBP3-208ENST00000527339 RIOK1Q9BRS2 568 aaKnown RBP20.96■□□□□ 0.95
LTBP3-208ENST00000527339 NAV1Q8NEY1 1877 aa20.95■□□□□ 0.94
LTBP3-208ENST00000527339 EN2P19622 333 aaPredicted RBP20.95■□□□□ 0.94
LTBP3-208ENST00000527339 MAP3K9P80192 1104 aa20.95■□□□□ 0.94
LTBP3-208ENST00000527339 MIGA2Q7L4E1 593 aa20.95■□□□□ 0.94
LTBP3-208ENST00000527339 OPTNQ96CV9 577 aa20.95■□□□□ 0.94
LTBP3-208ENST00000527339 FLT1P17948 1338 aa20.95■□□□□ 0.94
LTBP3-208ENST00000527339 CEP290O15078 2479 aa20.94■□□□□ 0.94
LTBP3-208ENST00000527339 CENPBP07199 599 aaPredicted RBP20.94■□□□□ 0.94
LTBP3-208ENST00000527339 MAPKAPK5Q8IW41 473 aa20.94■□□□□ 0.94
LTBP3-208ENST00000527339 BRI3BPQ8WY22 251 aa20.94■□□□□ 0.94
LTBP3-208ENST00000527339 ARMC5Q96C12 935 aa20.94■□□□□ 0.94
LTBP3-208ENST00000527339 ERO1AQ96HE7 468 aa20.94■□□□□ 0.94
LTBP3-208ENST00000527339 WRNIP1Q96S55 665 aa20.94■□□□□ 0.94
LTBP3-208ENST00000527339 DHX36Q9H2U1 1008 aaKnown RBP20.94■□□□□ 0.94
LTBP3-208ENST00000527339 CSADQ9Y600 493 aa20.94■□□□□ 0.94
LTBP3-208ENST00000527339 SIPA1L1O43166 1804 aa20.94■□□□□ 0.94
LTBP3-208ENST00000527339 SZT2Q5T011 3432 aa20.94■□□□□ 0.94
LTBP3-208ENST00000527339 DDX60LQ5H9U9 1706 aaKnown RBP20.93■□□□□ 0.94
LTBP3-208ENST00000527339 RBBP6Q7Z6E9 1792 aaKnown RBP20.93■□□□□ 0.94
LTBP3-208ENST00000527339 SP3Q02447 781 aa20.93■□□□□ 0.94
LTBP3-208ENST00000527339 MAP3K10Q02779 954 aa20.93■□□□□ 0.94
LTBP3-208ENST00000527339 LRRFIP1Q32MZ4 808 aaKnown RBP20.93■□□□□ 0.94
LTBP3-208ENST00000527339 EFCC1Q9HA90 598 aa20.93■□□□□ 0.94
LTBP3-208ENST00000527339 ZFYP08048 801 aaPredicted RBP20.92■□□□□ 0.94
LTBP3-208ENST00000527339 USP5P45974 858 aa20.92■□□□□ 0.94
LTBP3-208ENST00000527339 VGLL4Q14135 290 aa20.92■□□□□ 0.94
LTBP3-208ENST00000527339 CRNKL1Q9BZJ0 848 aaKnown RBP20.92■□□□□ 0.94
LTBP3-208ENST00000527339 ZNF112Q9UJU3 913 aa20.92■□□□□ 0.94
LTBP3-208ENST00000527339 ZSWIM8A7E2V4 1837 aa20.91■□□□□ 0.94
LTBP3-208ENST00000527339 TBC1D12O60347 775 aa20.91■□□□□ 0.94
LTBP3-208ENST00000527339 SLFNL1Q499Z3 407 aa20.91■□□□□ 0.94
LTBP3-208ENST00000527339 HABP4Q5JVS0 413 aaKnown RBP20.91■□□□□ 0.94
LTBP3-208ENST00000527339 FAM43AQ8N2R8 423 aa20.91■□□□□ 0.94
LTBP3-208ENST00000527339 OSBPL3Q9H4L5 887 aa20.91■□□□□ 0.94
LTBP3-208ENST00000527339 DOCK1Q14185 1865 aa20.9■□□□□ 0.94
LTBP3-208ENST00000527339 RANBP2P49792 3224 aaKnown RBP20.9■□□□□ 0.94
LTBP3-208ENST00000527339 MBD4O95243 580 aa20.9■□□□□ 0.94
LTBP3-208ENST00000527339 CHGBP05060 677 aa20.9■□□□□ 0.94
LTBP3-208ENST00000527339 PLEKHM2Q8IWE5 1019 aa20.9■□□□□ 0.94
LTBP3-208ENST00000527339 LCORLQ8N3X6 602 aa20.9■□□□□ 0.94
LTBP3-208ENST00000527339 ZKSCAN4Q969J2 545 aaPredicted RBP20.9■□□□□ 0.94
LTBP3-208ENST00000527339 PI4KBQ9UBF8 816 aa20.9■□□□□ 0.94
LTBP3-208ENST00000527339 ATAD5Q96QE3 1844 aa20.9■□□□□ 0.94
LTBP3-208ENST00000527339 BAZ2AQ9UIF9 1905 aaKnown RBP20.89■□□□□ 0.93
LTBP3-208ENST00000527339 PHF20L1A8MW92 1017 aa20.89■□□□□ 0.93
LTBP3-208ENST00000527339 RNF113AO15541 343 aaKnown RBP20.89■□□□□ 0.93
LTBP3-208ENST00000527339 INPP5BP32019 993 aa20.89■□□□□ 0.93
LTBP3-208ENST00000527339 OTUD7BQ6GQQ9 843 aa20.89■□□□□ 0.93
LTBP3-208ENST00000527339 APPBP2Q92624 585 aa20.89■□□□□ 0.93
LTBP3-208ENST00000527339 EVI5LQ96CN4 794 aa20.89■□□□□ 0.93
LTBP3-208ENST00000527339 FSD1Q9BTV5 496 aa20.89■□□□□ 0.93
LTBP3-208ENST00000527339 ARMT1Q9H993 441 aa20.89■□□□□ 0.93
LTBP3-208ENST00000527339 HERC5Q9UII4 1024 aaKnown RBP20.89■□□□□ 0.93
LTBP3-208ENST00000527339 SNCAIPQ9Y6H5 919 aa20.89■□□□□ 0.93
LTBP3-208ENST00000527339 HLA-DOAP06340 250 aa20.88■□□□□ 0.93
LTBP3-208ENST00000527339 NOL9Q5SY16 702 aaKnown RBP20.88■□□□□ 0.93
LTBP3-208ENST00000527339 ZNF333Q96JL9 665 aa20.88■□□□□ 0.93
LTBP3-208ENST00000527339 PUS7LQ9H0K6 701 aaKnown RBP20.88■□□□□ 0.93
LTBP3-208ENST00000527339 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.88■□□□□ 0.93
LTBP3-208ENST00000527339 SAP30BPQ9UHR5 308 aaKnown RBP20.88■□□□□ 0.93
LTBP3-208ENST00000527339 PALD1Q9ULE6 856 aa20.88■□□□□ 0.93
LTBP3-208ENST00000527339 PTCH2Q9Y6C5 1203 aa20.88■□□□□ 0.93
LTBP3-208ENST00000527339 CCL15-CCL14A0A0B4J2E2 113 aa20.87■□□□□ 0.93
LTBP3-208ENST00000527339 SPDYE5A6NIY4 337 aa20.87■□□□□ 0.93
LTBP3-208ENST00000527339 NEFLP07196 543 aa20.87■□□□□ 0.93
LTBP3-208ENST00000527339 CCL15Q16663 113 aa20.87■□□□□ 0.93
LTBP3-208ENST00000527339 METTL16Q86W50 562 aaKnown RBP20.87■□□□□ 0.93
LTBP3-208ENST00000527339 ERO1BQ86YB8 467 aa20.87■□□□□ 0.93
LTBP3-208ENST00000527339 OTUD5Q96G74 571 aa20.87■□□□□ 0.93
LTBP3-208ENST00000527339 ARHGAP39Q9C0H5 1083 aa20.87■□□□□ 0.93
LTBP3-208ENST00000527339 SLURP2P0DP57 97 aa20.86■□□□□ 0.93
LTBP3-208ENST00000527339 TAF1CQ15572 869 aaPredicted RBP20.86■□□□□ 0.93
LTBP3-208ENST00000527339 TICAM2Q86XR7 235 aa20.86■□□□□ 0.93
LTBP3-208ENST00000527339 FOXP4Q8IVH2 680 aaPredicted RBP20.86■□□□□ 0.93
LTBP3-208ENST00000527339 SDR42E1Q8WUS8 393 aa20.86■□□□□ 0.93
LTBP3-208ENST00000527339 OSBP2Q969R2 916 aa20.86■□□□□ 0.93
LTBP3-208ENST00000527339 ATP8A2Q9NTI2 1148 aa20.86■□□□□ 0.93
LTBP3-208ENST00000527339 FAM196BA6NMK8 535 aa20.85■□□□□ 0.93
LTBP3-208ENST00000527339 CTNND1O60716 968 aaKnown RBP20.85■□□□□ 0.93
LTBP3-208ENST00000527339 TTC6Q86TZ1 520 aa20.85■□□□□ 0.93
LTBP3-208ENST00000527339 SCYL3Q8IZE3 742 aa20.85■□□□□ 0.93
LTBP3-208ENST00000527339 CRACR2BQ8N4Y2 399 aaPredicted RBP20.85■□□□□ 0.93
LTBP3-208ENST00000527339 TRIM34Q9BYJ4 488 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms