RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 F6X3S4 739 aa17.09■□□□□ 0.33
SSRP1-203ENST00000526696 ZKSCAN1P17029 563 aaPredicted RBP17.09■□□□□ 0.33
SSRP1-203ENST00000526696 RGS3P49796 1198 aa17.09■□□□□ 0.33
SSRP1-203ENST00000526696 CALD1Q05682 793 aaKnown RBP17.09■□□□□ 0.33
SSRP1-203ENST00000526696 WDR43Q15061 677 aaKnown RBP eCLIP17.09■□□□□ 0.33
SSRP1-203ENST00000526696 RALBP1Q15311 655 aa17.09■□□□□ 0.33
SSRP1-203ENST00000526696 BADQ92934 168 aa17.09■□□□□ 0.33
SSRP1-203ENST00000526696 NUDT12Q9BQG2 462 aa17.09■□□□□ 0.33
SSRP1-203ENST00000526696 TXNRD2Q9NNW7 524 aa17.09■□□□□ 0.33
SSRP1-203ENST00000526696 MROH5Q6ZUA9 1318 aa17.09■□□□□ 0.33
SSRP1-203ENST00000526696 PRDX5P30044 214 aa17.08■□□□□ 0.32
SSRP1-203ENST00000526696 SPP2Q13103 211 aa17.08■□□□□ 0.32
SSRP1-203ENST00000526696 TWISTNBQ3B726 338 aaPredicted RBP17.08■□□□□ 0.32
SSRP1-203ENST00000526696 ASB2Q96Q27 587 aa17.08■□□□□ 0.32
SSRP1-203ENST00000526696 PRKAG2Q9UGJ0 569 aa17.08■□□□□ 0.32
SSRP1-203ENST00000526696 MYH2Q9UKX2 1941 aa17.08■□□□□ 0.32
SSRP1-203ENST00000526696 GRM8O00222 908 aa17.07■□□□□ 0.32
SSRP1-203ENST00000526696 HMGCS2P54868 508 aa17.07■□□□□ 0.32
SSRP1-203ENST00000526696 ATXN2LQ8WWM7 1075 aaKnown RBP17.07■□□□□ 0.32
SSRP1-203ENST00000526696 SOCS4Q8WXH5 440 aa17.07■□□□□ 0.32
SSRP1-203ENST00000526696 UHRF1Q96T88 793 aaPredicted RBP17.07■□□□□ 0.32
SSRP1-203ENST00000526696 IDI2Q9BXS1 227 aa17.07■□□□□ 0.32
SSRP1-203ENST00000526696 ATP11BQ9Y2G3 1177 aa17.07■□□□□ 0.32
SSRP1-203ENST00000526696 ATAD5Q96QE3 1844 aa17.06■□□□□ 0.32
SSRP1-203ENST00000526696 SH3RF1Q7Z6J0 888 aa17.06■□□□□ 0.32
SSRP1-203ENST00000526696 DDX4Q9NQI0 724 aaKnown RBP17.06■□□□□ 0.32
SSRP1-203ENST00000526696 FAM196BA6NMK8 535 aa17.05■□□□□ 0.32
SSRP1-203ENST00000526696 ENTPD3O75355 529 aa17.05■□□□□ 0.32
SSRP1-203ENST00000526696 PDE8BO95263 885 aa17.05■□□□□ 0.32
SSRP1-203ENST00000526696 FGFR2P21802 821 aa17.05■□□□□ 0.32
SSRP1-203ENST00000526696 EPHB4P54760 987 aa17.05■□□□□ 0.32
SSRP1-203ENST00000526696 METTL24Q5JXM2 366 aa17.05■□□□□ 0.32
SSRP1-203ENST00000526696 MORN1Q5T089 497 aa17.05■□□□□ 0.32
SSRP1-203ENST00000526696 POTEEQ6S8J3 1075 aa17.05■□□□□ 0.32
SSRP1-203ENST00000526696 TRMT44Q8IYL2 757 aaKnown RBP17.05■□□□□ 0.32
SSRP1-203ENST00000526696 WDR66Q8TBY9 1149 aa17.05■□□□□ 0.32
SSRP1-203ENST00000526696 PPM1EQ8WY54 764 aa17.05■□□□□ 0.32
SSRP1-203ENST00000526696 SUCLG2Q96I99 432 aa17.05■□□□□ 0.32
SSRP1-203ENST00000526696 PORCNQ9H237 461 aa17.05■□□□□ 0.32
SSRP1-203ENST00000526696 FLRT1Q9NZU1 646 aa17.05■□□□□ 0.32
SSRP1-203ENST00000526696 CHD9Q3L8U1 2897 aa17.05■□□□□ 0.32
SSRP1-203ENST00000526696 TRIM43BA6NCK2 446 aa17.04■□□□□ 0.32
SSRP1-203ENST00000526696 ITGB8P26012 769 aa17.04■□□□□ 0.32
SSRP1-203ENST00000526696 RRP1BQ14684 758 aaKnown RBP17.04■□□□□ 0.32
SSRP1-203ENST00000526696 Q3C1V9 767 aa17.04■□□□□ 0.32
SSRP1-203ENST00000526696 ZSCAN29Q8IWY8 852 aaPredicted RBP17.04■□□□□ 0.32
SSRP1-203ENST00000526696 ZNF280CQ8ND82 737 aa17.04■□□□□ 0.32
SSRP1-203ENST00000526696 TRIM43Q96BQ3 446 aaPredicted RBP17.04■□□□□ 0.32
SSRP1-203ENST00000526696 NECAB3Q96P71 396 aaPredicted RBP17.04■□□□□ 0.32
SSRP1-203ENST00000526696 P2RX7Q99572 595 aaKnown RBP17.04■□□□□ 0.32
SSRP1-203ENST00000526696 PRDM5Q9NQX1 630 aaPredicted RBP17.04■□□□□ 0.32
SSRP1-203ENST00000526696 PDLIM7Q9NR12 457 aa17.04■□□□□ 0.32
SSRP1-203ENST00000526696 KIF16BQ96L93 1317 aa17.03■□□□□ 0.32
SSRP1-203ENST00000526696 MYBBP1AQ9BQG0 1328 aaKnown RBP17.03■□□□□ 0.32
SSRP1-203ENST00000526696 SH3D19Q5HYK7 790 aa17.03■□□□□ 0.32
SSRP1-203ENST00000526696 THEGQ9P2T0 379 aa17.03■□□□□ 0.32
SSRP1-203ENST00000526696 RBPJLQ9UBG7 517 aa17.03■□□□□ 0.32
SSRP1-203ENST00000526696 DDX20Q9UHI6 824 aaKnown RBP17.03■□□□□ 0.32
SSRP1-203ENST00000526696 REV3LO60673 3130 aa17.03■□□□□ 0.32
SSRP1-203ENST00000526696 XIRP2A4UGR9 3374 aa17.02■□□□□ 0.32
SSRP1-203ENST00000526696 DNM1LO00429 736 aa17.02■□□□□ 0.32
SSRP1-203ENST00000526696 RGS2P41220 211 aa17.02■□□□□ 0.32
SSRP1-203ENST00000526696 PABPC4Q13310 644 aaKnown RBP eCLIP17.02■□□□□ 0.32
SSRP1-203ENST00000526696 PDE3AQ14432 1141 aa17.02■□□□□ 0.32
SSRP1-203ENST00000526696 TRIM60Q495X7 471 aa17.02■□□□□ 0.32
SSRP1-203ENST00000526696 SLC39A5Q6ZMH5 540 aa17.02■□□□□ 0.32
SSRP1-203ENST00000526696 GPR142Q7Z601 462 aa17.02■□□□□ 0.32
SSRP1-203ENST00000526696 GPRC5AQ8NFJ5 357 aa17.02■□□□□ 0.32
SSRP1-203ENST00000526696 LPAR1Q92633 364 aa17.02■□□□□ 0.32
SSRP1-203ENST00000526696 APBA2Q99767 749 aa17.02■□□□□ 0.32
SSRP1-203ENST00000526696 ZNF576Q9H609 170 aa17.02■□□□□ 0.32
SSRP1-203ENST00000526696 ARIH1Q9Y4X5 557 aaPredicted RBP17.02■□□□□ 0.32
SSRP1-203ENST00000526696 DNAJB2P25686 324 aa17.01■□□□□ 0.31
SSRP1-203ENST00000526696 SNX17Q15036 470 aa17.01■□□□□ 0.31
SSRP1-203ENST00000526696 GJC2Q5T442 439 aaPredicted RBP17.01■□□□□ 0.31
SSRP1-203ENST00000526696 TRPV1Q8NER1 839 aa17.01■□□□□ 0.31
SSRP1-203ENST00000526696 KLHDC4Q8TBB5 520 aa17.01■□□□□ 0.31
SSRP1-203ENST00000526696 RNPC3Q96LT9 517 aaKnown RBP17.01■□□□□ 0.31
SSRP1-203ENST00000526696 CHD7Q9P2D1 2997 aa17.01■□□□□ 0.31
SSRP1-203ENST00000526696 TBC1D12O60347 775 aa17■□□□□ 0.31
SSRP1-203ENST00000526696 MAPK4P31152 587 aa17■□□□□ 0.31
SSRP1-203ENST00000526696 HERVK_113P62684 666 aa17■□□□□ 0.31
SSRP1-203ENST00000526696 MRPS5P82675 430 aaKnown RBP17■□□□□ 0.31
SSRP1-203ENST00000526696 C1QTNF1Q9BXJ1 281 aa17■□□□□ 0.31
SSRP1-203ENST00000526696 GAKO14976 1311 aa16.99■□□□□ 0.31
SSRP1-203ENST00000526696 LDHBP07195 334 aaKnown RBP16.99■□□□□ 0.31
SSRP1-203ENST00000526696 HOXA7P31268 230 aaPredicted RBP16.99■□□□□ 0.31
SSRP1-203ENST00000526696 ZEB1P37275 1124 aaPredicted RBP16.99■□□□□ 0.31
SSRP1-203ENST00000526696 ERVK-9P63128 1117 aa16.99■□□□□ 0.31
SSRP1-203ENST00000526696 ERVK-24P63145 666 aa16.99■□□□□ 0.31
SSRP1-203ENST00000526696 IRX3P78415 501 aaPredicted RBP16.99■□□□□ 0.31
SSRP1-203ENST00000526696 PICALMQ13492 652 aa16.99■□□□□ 0.31
SSRP1-203ENST00000526696 PLEKHH3Q7Z736 793 aa16.99■□□□□ 0.31
SSRP1-203ENST00000526696 LRFN3Q9BTN0 628 aa16.99■□□□□ 0.31
SSRP1-203ENST00000526696 OSBPL5Q9H0X9 879 aaPredicted RBP16.99■□□□□ 0.31
SSRP1-203ENST00000526696 C9orf78Q9NZ63 289 aaPredicted RBP16.99■□□□□ 0.31
SSRP1-203ENST00000526696 PLXNA1Q9UIW2 1896 aa16.99■□□□□ 0.31
SSRP1-203ENST00000526696 IFIT1P09914 478 aaKnown RBP16.98■□□□□ 0.31
SSRP1-203ENST00000526696 NBPF7P0C2Y1 421 aaPredicted RBP16.98■□□□□ 0.31
SSRP1-203ENST00000526696 MAP2K5Q13163 448 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms