RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 SYNGAP1Q96PV0 1343 aa8.18□□□□□ -1.1
C11orf54-203ENST00000526335 H3BRB1 525 aa8.18□□□□□ -1.1
C11orf54-203ENST00000526335 NDUFB5O43674 189 aa8.18□□□□□ -1.1
C11orf54-203ENST00000526335 PTPN12Q05209 780 aaKnown RBP8.18□□□□□ -1.1
C11orf54-203ENST00000526335 HEXIM2Q96MH2 286 aaKnown RBP8.18□□□□□ -1.1
C11orf54-203ENST00000526335 FANCD2OSQ96PS1 177 aa8.18□□□□□ -1.1
C11orf54-203ENST00000526335 TUT1Q9H6E5 874 aaKnown RBP8.18□□□□□ -1.1
C11orf54-203ENST00000526335 CARS2Q9HA77 564 aaKnown RBP8.18□□□□□ -1.1
C11orf54-203ENST00000526335 GDNFP39905 211 aa8.17□□□□□ -1.1
C11orf54-203ENST00000526335 PDE3BQ13370 1112 aa8.17□□□□□ -1.1
C11orf54-203ENST00000526335 ORC1Q13415 861 aa8.17□□□□□ -1.1
C11orf54-203ENST00000526335 SPACA3Q8IXA5 215 aa8.17□□□□□ -1.1
C11orf54-203ENST00000526335 KCNC2Q96PR1 638 aa8.17□□□□□ -1.1
C11orf54-203ENST00000526335 SLC26A8Q96RN1 970 aa8.17□□□□□ -1.1
C11orf54-203ENST00000526335 LIG1P18858 919 aa8.16□□□□□ -1.1
C11orf54-203ENST00000526335 B4GALNT3Q6L9W6 998 aa8.16□□□□□ -1.1
C11orf54-203ENST00000526335 ABCB6Q9NP58 842 aa8.16□□□□□ -1.1
C11orf54-203ENST00000526335 SLFN14P0C7P3 912 aa8.15□□□□□ -1.1
C11orf54-203ENST00000526335 HNRNPUQ00839 825 aaKnown RBP eCLIP8.15□□□□□ -1.1
C11orf54-203ENST00000526335 RPS26P11Q5JNZ5 115 aaPredicted RBP8.15□□□□□ -1.1
C11orf54-203ENST00000526335 CXorf38Q8TB03 319 aa8.15□□□□□ -1.1
C11orf54-203ENST00000526335 CCDC86Q9H6F5 360 aaKnown RBP8.15□□□□□ -1.1
C11orf54-203ENST00000526335 RTEL1Q9NZ71 1219 aa8.15□□□□□ -1.1
C11orf54-203ENST00000526335 PCOLCE2Q9UKZ9 415 aa8.15□□□□□ -1.1
C11orf54-203ENST00000526335 GADD45BO75293 160 aaPredicted RBP8.14□□□□□ -1.11
C11orf54-203ENST00000526335 ADRB1P08588 477 aa8.14□□□□□ -1.11
C11orf54-203ENST00000526335 HCLS1P14317 486 aaPredicted RBP8.14□□□□□ -1.11
C11orf54-203ENST00000526335 ID3Q02535 119 aa8.14□□□□□ -1.11
C11orf54-203ENST00000526335 TTLL4Q14679 1199 aa8.14□□□□□ -1.11
C11orf54-203ENST00000526335 PRPF40BQ6NWY9 871 aaKnown RBP8.14□□□□□ -1.11
C11orf54-203ENST00000526335 WDR89Q96FK6 387 aaPredicted RBP8.14□□□□□ -1.11
C11orf54-203ENST00000526335 ZC3H12CQ9C0D7 883 aaKnown RBP8.14□□□□□ -1.11
C11orf54-203ENST00000526335 DISC1Q9NRI5 854 aa8.14□□□□□ -1.11
C11orf54-203ENST00000526335 TMEM238LA0A1B0GVL6 79 aa8.13□□□□□ -1.11
C11orf54-203ENST00000526335 SERPINB4P48594 390 aa8.13□□□□□ -1.11
C11orf54-203ENST00000526335 ZNF157P51786 506 aaPredicted RBP8.13□□□□□ -1.11
C11orf54-203ENST00000526335 FAM129BQ96TA1 746 aa8.13□□□□□ -1.11
C11orf54-203ENST00000526335 GTF2IRD1Q9UHL9 959 aa8.13□□□□□ -1.11
C11orf54-203ENST00000526335 TRAK1Q9UPV9 953 aa8.13□□□□□ -1.11
C11orf54-203ENST00000526335 CELA3BP08861 270 aa8.12□□□□□ -1.11
C11orf54-203ENST00000526335 NKPD1Q17RQ9 610 aa8.12□□□□□ -1.11
C11orf54-203ENST00000526335 MARCH10Q8NA82 808 aaPredicted RBP8.12□□□□□ -1.11
C11orf54-203ENST00000526335 CCDC74AQ96AQ1 378 aa8.12□□□□□ -1.11
C11orf54-203ENST00000526335 DNAJC25Q9H1X3 360 aa8.12□□□□□ -1.11
C11orf54-203ENST00000526335 SSU72Q9NP77 194 aaKnown RBP8.12□□□□□ -1.11
C11orf54-203ENST00000526335 PDIA4P13667 645 aaKnown RBP8.11□□□□□ -1.11
C11orf54-203ENST00000526335 ARHGAP4P98171 946 aa8.11□□□□□ -1.11
C11orf54-203ENST00000526335 CITED4Q96RK1 184 aa8.11□□□□□ -1.11
C11orf54-203ENST00000526335 KRT82Q9NSB4 513 aa8.11□□□□□ -1.11
C11orf54-203ENST00000526335 EIF1AYO14602 144 aaKnown RBP8.1□□□□□ -1.11
C11orf54-203ENST00000526335 ZNF862O60290 1169 aa8.1□□□□□ -1.11
C11orf54-203ENST00000526335 GSTP1P09211 210 aaKnown RBP8.1□□□□□ -1.11
C11orf54-203ENST00000526335 FAAP100Q0VG06 881 aa8.1□□□□□ -1.11
C11orf54-203ENST00000526335 FAM214BQ7L5A3 538 aa8.1□□□□□ -1.11
C11orf54-203ENST00000526335 ABHD4Q8TB40 342 aa8.1□□□□□ -1.11
C11orf54-203ENST00000526335 TMC1Q8TDI8 760 aa8.1□□□□□ -1.11
C11orf54-203ENST00000526335 USTQ9Y2C2 406 aa8.1□□□□□ -1.11
C11orf54-203ENST00000526335 IGF2BP3O00425 579 aaKnown RBP eCLIP8.1□□□□□ -1.11
C11orf54-203ENST00000526335 CLCN7P51798 805 aa8.1□□□□□ -1.11
C11orf54-203ENST00000526335 ZXDCQ2QGD7 858 aaPredicted RBP8.1□□□□□ -1.11
C11orf54-203ENST00000526335 KIF4BQ2VIQ3 1234 aa8.1□□□□□ -1.11
C11orf54-203ENST00000526335 NIF3L1Q9GZT8 377 aa8.1□□□□□ -1.11
C11orf54-203ENST00000526335 ADAMTS20P59510 1910 aa8.09□□□□□ -1.11
C11orf54-203ENST00000526335 GNAT3A8MTJ3 354 aa8.09□□□□□ -1.12
C11orf54-203ENST00000526335 SUV39H1O43463 412 aa8.09□□□□□ -1.12
C11orf54-203ENST00000526335 DTHD1Q6ZMT9 781 aa8.09□□□□□ -1.12
C11orf54-203ENST00000526335 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.09□□□□□ -1.12
C11orf54-203ENST00000526335 BAHD1Q8TBE0 780 aaPredicted RBP8.09□□□□□ -1.12
C11orf54-203ENST00000526335 GPN3Q9UHW5 284 aaPredicted RBP8.09□□□□□ -1.12
C11orf54-203ENST00000526335 PCDHGC5Q9Y5F6 944 aa8.09□□□□□ -1.12
C11orf54-203ENST00000526335 GPR182O15218 404 aa8.08□□□□□ -1.12
C11orf54-203ENST00000526335 TRIM13O60858 407 aa8.08□□□□□ -1.12
C11orf54-203ENST00000526335 SRFP11831 508 aa8.08□□□□□ -1.12
C11orf54-203ENST00000526335 RANGAP1P46060 587 aaPredicted RBP8.08□□□□□ -1.12
C11orf54-203ENST00000526335 PPP2R3AQ06190 1150 aa8.08□□□□□ -1.12
C11orf54-203ENST00000526335 GRM2Q14416 872 aa8.08□□□□□ -1.12
C11orf54-203ENST00000526335 TCERG1LQ5VWI1 586 aa8.08□□□□□ -1.12
C11orf54-203ENST00000526335 ERICH6BQ5W0A0 696 aa8.08□□□□□ -1.12
C11orf54-203ENST00000526335 KCNB2Q92953 911 aa8.08□□□□□ -1.12
C11orf54-203ENST00000526335 IGHA2P01877 340 aa8.07□□□□□ -1.12
C11orf54-203ENST00000526335 RAC2P15153 192 aa8.07□□□□□ -1.12
C11orf54-203ENST00000526335 NPAS4Q8IUM7 802 aa8.07□□□□□ -1.12
C11orf54-203ENST00000526335 CCDC120Q96HB5 630 aa8.07□□□□□ -1.12
C11orf54-203ENST00000526335 ATP13A1Q9HD20 1204 aa8.07□□□□□ -1.12
C11orf54-203ENST00000526335 FCGRTP55899 365 aa8.06□□□□□ -1.12
C11orf54-203ENST00000526335 EPS8L3Q8TE67 593 aaKnown RBP8.06□□□□□ -1.12
C11orf54-203ENST00000526335 TMEM39AQ9NV64 488 aa8.06□□□□□ -1.12
C11orf54-203ENST00000526335 NEFMP07197 916 aa8.05□□□□□ -1.12
C11orf54-203ENST00000526335 ISL2Q96A47 359 aa8.05□□□□□ -1.12
C11orf54-203ENST00000526335 PPP4R2Q9NY27 417 aa8.05□□□□□ -1.12
C11orf54-203ENST00000526335 CNOT6Q9ULM6 557 aaKnown RBP8.05□□□□□ -1.12
C11orf54-203ENST00000526335 DMRTB1Q96MA1 342 aa8.04□□□□□ -1.12
C11orf54-203ENST00000526335 XYLT2Q9H1B5 865 aa8.04□□□□□ -1.12
C11orf54-203ENST00000526335 ZBTB7CA1YPR0 619 aa8.03□□□□□ -1.12
C11orf54-203ENST00000526335 SASH1O94885 1247 aa8.03□□□□□ -1.12
C11orf54-203ENST00000526335 DLG4P78352 724 aa8.03□□□□□ -1.12
C11orf54-203ENST00000526335 PDZD3Q86UT5 571 aa8.03□□□□□ -1.12
C11orf54-203ENST00000526335 SULF2Q8IWU5 870 aa8.03□□□□□ -1.12
C11orf54-203ENST00000526335 NLRP2Q9NX02 1062 aa8.03□□□□□ -1.12
C11orf54-203ENST00000526335 XRCC5P13010 732 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms