RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 NOM1Q5C9Z4 860 aaKnown RBP15.59■□□□□ 0.09
TRAPPC4-205ENST00000525079 HAUS7Q99871 368 aa15.59■□□□□ 0.09
TRAPPC4-205ENST00000525079 PI4KBQ9UBF8 816 aa15.59■□□□□ 0.09
TRAPPC4-205ENST00000525079 KCNH4Q9UQ05 1017 aa15.59■□□□□ 0.09
TRAPPC4-205ENST00000525079 ZNF532Q9HCE3 1301 aa15.59■□□□□ 0.09
TRAPPC4-205ENST00000525079 FOCADQ5VW36 1801 aa15.59■□□□□ 0.09
TRAPPC4-205ENST00000525079 MAGEB6P1A0A0J9YX57 407 aa15.58■□□□□ 0.08
TRAPPC4-205ENST00000525079 CHGBP05060 677 aa15.58■□□□□ 0.08
TRAPPC4-205ENST00000525079 TSHZ3Q63HK5 1081 aa15.58■□□□□ 0.08
TRAPPC4-205ENST00000525079 DHX36Q9H2U1 1008 aaKnown RBP15.58■□□□□ 0.08
TRAPPC4-205ENST00000525079 ZFYVE28Q9HCC9 887 aa15.58■□□□□ 0.08
TRAPPC4-205ENST00000525079 SIPA1L1O43166 1804 aa15.58■□□□□ 0.08
TRAPPC4-205ENST00000525079 DOCK1Q14185 1865 aa15.58■□□□□ 0.08
TRAPPC4-205ENST00000525079 TCRBV5S4A2TA0A5A2 114 aa15.57■□□□□ 0.08
TRAPPC4-205ENST00000525079 MOGSQ13724 837 aa15.57■□□□□ 0.08
TRAPPC4-205ENST00000525079 CRACR2BQ8N4Y2 399 aaPredicted RBP15.57■□□□□ 0.08
TRAPPC4-205ENST00000525079 CD99L2Q8TCZ2 262 aa15.57■□□□□ 0.08
TRAPPC4-205ENST00000525079 RIOK1Q9BRS2 568 aaKnown RBP15.57■□□□□ 0.08
TRAPPC4-205ENST00000525079 ECHDC1Q9NTX5 307 aa15.57■□□□□ 0.08
TRAPPC4-205ENST00000525079 AFG3L2Q9Y4W6 797 aa15.57■□□□□ 0.08
TRAPPC4-205ENST00000525079 TRIM75PA6NK02 468 aa15.56■□□□□ 0.08
TRAPPC4-205ENST00000525079 PDHXO00330 501 aa15.56■□□□□ 0.08
TRAPPC4-205ENST00000525079 CXCL11O14625 94 aa15.56■□□□□ 0.08
TRAPPC4-205ENST00000525079 CAP2P40123 477 aa15.56■□□□□ 0.08
TRAPPC4-205ENST00000525079 SP3Q02447 781 aa15.56■□□□□ 0.08
TRAPPC4-205ENST00000525079 FOXP4Q8IVH2 680 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC4-205ENST00000525079 TRIM34Q9BYJ4 488 aa15.56■□□□□ 0.08
TRAPPC4-205ENST00000525079 DNAJC18Q9H819 358 aa15.56■□□□□ 0.08
TRAPPC4-205ENST00000525079 HERC5Q9UII4 1024 aaKnown RBP15.56■□□□□ 0.08
TRAPPC4-205ENST00000525079 MYH1P12882 1939 aa15.56■□□□□ 0.08
TRAPPC4-205ENST00000525079 PHIPQ8WWQ0 1821 aa15.55■□□□□ 0.08
TRAPPC4-205ENST00000525079 ECM2O94769 699 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC4-205ENST00000525079 HLA-DOAP06340 250 aa15.55■□□□□ 0.08
TRAPPC4-205ENST00000525079 ADD2P35612 726 aa15.55■□□□□ 0.08
TRAPPC4-205ENST00000525079 JAG1P78504 1218 aa15.55■□□□□ 0.08
TRAPPC4-205ENST00000525079 SHROOM1Q2M3G4 852 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC4-205ENST00000525079 GPAT2Q6NUI2 795 aa15.55■□□□□ 0.08
TRAPPC4-205ENST00000525079 TMED8Q6PL24 325 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC4-205ENST00000525079 GADL1Q6ZQY3 521 aa15.55■□□□□ 0.08
TRAPPC4-205ENST00000525079 ANKRD23Q86SG2 305 aa15.55■□□□□ 0.08
TRAPPC4-205ENST00000525079 CERS3Q8IU89 383 aa15.55■□□□□ 0.08
TRAPPC4-205ENST00000525079 LCORLQ8N3X6 602 aa15.55■□□□□ 0.08
TRAPPC4-205ENST00000525079 OTUD7AQ8TE49 926 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC4-205ENST00000525079 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.55■□□□□ 0.08
TRAPPC4-205ENST00000525079 ARMT1Q9H993 441 aa15.55■□□□□ 0.08
TRAPPC4-205ENST00000525079 TRIM17Q9Y577 477 aa15.55■□□□□ 0.08
TRAPPC4-205ENST00000525079 ATAD5Q96QE3 1844 aa15.54■□□□□ 0.08
TRAPPC4-205ENST00000525079 GDF11O95390 407 aa15.54■□□□□ 0.08
TRAPPC4-205ENST00000525079 CAP1Q01518 475 aa15.54■□□□□ 0.08
TRAPPC4-205ENST00000525079 EXOC6Q8TAG9 804 aa15.54■□□□□ 0.08
TRAPPC4-205ENST00000525079 SDR42E1Q8WUS8 393 aa15.54■□□□□ 0.08
TRAPPC4-205ENST00000525079 ERO1AQ96HE7 468 aa15.54■□□□□ 0.08
TRAPPC4-205ENST00000525079 GPATCH3Q96I76 525 aa15.54■□□□□ 0.08
TRAPPC4-205ENST00000525079 CRNKL1Q9BZJ0 848 aaKnown RBP15.54■□□□□ 0.08
TRAPPC4-205ENST00000525079 SUPT16HQ9Y5B9 1047 aaKnown RBP15.54■□□□□ 0.08
TRAPPC4-205ENST00000525079 A0A0G2JLL6 359 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC4-205ENST00000525079 PRKAB2O43741 272 aa15.53■□□□□ 0.08
TRAPPC4-205ENST00000525079 TLR2O60603 784 aa15.53■□□□□ 0.08
TRAPPC4-205ENST00000525079 MBD4O95243 580 aa15.53■□□□□ 0.08
TRAPPC4-205ENST00000525079 SPP2Q13103 211 aa15.53■□□□□ 0.08
TRAPPC4-205ENST00000525079 ANKRD45Q5TZF3 282 aa15.53■□□□□ 0.08
TRAPPC4-205ENST00000525079 OTOP1Q7RTM1 612 aa15.53■□□□□ 0.08
TRAPPC4-205ENST00000525079 PRRT2Q7Z6L0 340 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC4-205ENST00000525079 METTL16Q86W50 562 aaKnown RBP15.53■□□□□ 0.08
TRAPPC4-205ENST00000525079 ZCCHC17Q9NP64 241 aaKnown RBP15.53■□□□□ 0.08
TRAPPC4-205ENST00000525079 CPA4Q9UI42 421 aa15.53■□□□□ 0.08
TRAPPC4-205ENST00000525079 HPS5Q9UPZ3 1129 aa15.53■□□□□ 0.08
TRAPPC4-205ENST00000525079 USP17L5A8MUK1 530 aa15.52■□□□□ 0.08
TRAPPC4-205ENST00000525079 POLR3DP05423 398 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC4-205ENST00000525079 CYP2C8P10632 490 aa15.52■□□□□ 0.08
TRAPPC4-205ENST00000525079 PLCD1P51178 756 aa15.52■□□□□ 0.08
TRAPPC4-205ENST00000525079 EVX2Q03828 476 aa15.52■□□□□ 0.08
TRAPPC4-205ENST00000525079 PKN2Q16513 984 aaKnown RBP15.52■□□□□ 0.08
TRAPPC4-205ENST00000525079 FASTKD5Q7L8L6 764 aaKnown RBP15.52■□□□□ 0.08
TRAPPC4-205ENST00000525079 TTC6Q86TZ1 520 aa15.52■□□□□ 0.08
TRAPPC4-205ENST00000525079 MYH7P12883 1935 aa15.51■□□□□ 0.07
TRAPPC4-205ENST00000525079 NAV1Q8NEY1 1877 aa15.51■□□□□ 0.07
TRAPPC4-205ENST00000525079 CYP2D6P10635 497 aa15.51■□□□□ 0.07
TRAPPC4-205ENST00000525079 ZSCAN25Q6NSZ9 544 aa15.51■□□□□ 0.07
TRAPPC4-205ENST00000525079 FBXO46Q6PJ61 603 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC4-205ENST00000525079 ZNF280CQ8ND82 737 aa15.51■□□□□ 0.07
TRAPPC4-205ENST00000525079 ARHGAP39Q9C0H5 1083 aa15.51■□□□□ 0.07
TRAPPC4-205ENST00000525079 EFCC1Q9HA90 598 aa15.51■□□□□ 0.07
TRAPPC4-205ENST00000525079 MCM9Q9NXL9 1143 aa15.51■□□□□ 0.07
TRAPPC4-205ENST00000525079 ZBTB47Q9UFB7 747 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC4-205ENST00000525079 SERPINB13Q9UIV8 391 aa15.51■□□□□ 0.07
TRAPPC4-205ENST00000525079 PTPRFP10586 1907 aa15.51■□□□□ 0.07
TRAPPC4-205ENST00000525079 ZSWIM8A7E2V4 1837 aa15.5■□□□□ 0.07
TRAPPC4-205ENST00000525079 ASNSP08243 561 aa15.5■□□□□ 0.07
TRAPPC4-205ENST00000525079 HMGCS2P54868 508 aa15.5■□□□□ 0.07
TRAPPC4-205ENST00000525079 HDAC1Q13547 482 aaPredicted RBP15.5■□□□□ 0.07
TRAPPC4-205ENST00000525079 UBE3CQ15386 1083 aa15.5■□□□□ 0.07
TRAPPC4-205ENST00000525079 TREML2Q5T2D2 321 aa15.5■□□□□ 0.07
TRAPPC4-205ENST00000525079 C17orf99Q6UX52 265 aa15.5■□□□□ 0.07
TRAPPC4-205ENST00000525079 KBTBD3Q8NAB2 608 aa15.5■□□□□ 0.07
TRAPPC4-205ENST00000525079 PUS7LQ9H0K6 701 aaKnown RBP15.5■□□□□ 0.07
TRAPPC4-205ENST00000525079 DCP1AQ9NPI6 582 aaPredicted RBP15.5■□□□□ 0.07
TRAPPC4-205ENST00000525079 TTC41PQ6P2S7 1318 aa15.49■□□□□ 0.07
TRAPPC4-205ENST00000525079 GH2P01242 217 aa15.49■□□□□ 0.07
TRAPPC4-205ENST00000525079 PI4K2BQ8TCG2 481 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms