RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 PI16Q6UXB8 463 aa15.75■□□□□ 0.11
SF3B2-203ENST00000524627 TBC1D9Q6ZT07 1266 aa15.75■□□□□ 0.11
SF3B2-203ENST00000524627 PROCA1Q8NCQ7 364 aaPredicted RBP15.75■□□□□ 0.11
SF3B2-203ENST00000524627 PAK6Q9NQU5 681 aaPredicted RBP15.75■□□□□ 0.11
SF3B2-203ENST00000524627 NPM3O75607 178 aaKnown RBP15.74■□□□□ 0.11
SF3B2-203ENST00000524627 HMGCS2P54868 508 aa15.74■□□□□ 0.11
SF3B2-203ENST00000524627 GSTO1P78417 241 aa15.74■□□□□ 0.11
SF3B2-203ENST00000524627 GORABQ5T7V8 394 aa15.74■□□□□ 0.11
SF3B2-203ENST00000524627 ZNF280CQ8ND82 737 aa15.74■□□□□ 0.11
SF3B2-203ENST00000524627 NSUN4Q96CB9 384 aaKnown RBP15.74■□□□□ 0.11
SF3B2-203ENST00000524627 OSBPL5Q9H0X9 879 aaPredicted RBP15.74■□□□□ 0.11
SF3B2-203ENST00000524627 HMG20BQ9P0W2 317 aa15.74■□□□□ 0.11
SF3B2-203ENST00000524627 LOC285556D6RIA3 1793 aa15.73■□□□□ 0.11
SF3B2-203ENST00000524627 LDHCP07864 332 aa15.73■□□□□ 0.11
SF3B2-203ENST00000524627 GNAI3P08754 354 aa15.73■□□□□ 0.11
SF3B2-203ENST00000524627 SPATA5Q8NB90 893 aa15.73■□□□□ 0.11
SF3B2-203ENST00000524627 PAWRQ96IZ0 340 aaKnown RBP15.73■□□□□ 0.11
SF3B2-203ENST00000524627 CRISPLD2Q9H0B8 497 aa15.73■□□□□ 0.11
SF3B2-203ENST00000524627 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.73■□□□□ 0.11
SF3B2-203ENST00000524627 RAI14Q9P0K7 980 aa15.73■□□□□ 0.11
SF3B2-203ENST00000524627 ATAD5Q96QE3 1844 aa15.73■□□□□ 0.11
SF3B2-203ENST00000524627 CAP2P40123 477 aa15.72■□□□□ 0.11
SF3B2-203ENST00000524627 GCLCP48506 637 aaPredicted RBP15.72■□□□□ 0.11
SF3B2-203ENST00000524627 RARSP54136 660 aaKnown RBP15.72■□□□□ 0.11
SF3B2-203ENST00000524627 MTX1Q13505 466 aa15.72■□□□□ 0.11
SF3B2-203ENST00000524627 RRP1BQ14684 758 aaKnown RBP15.72■□□□□ 0.11
SF3B2-203ENST00000524627 TEX11Q8IYF3 940 aa15.72■□□□□ 0.11
SF3B2-203ENST00000524627 DIS3LQ8TF46 1054 aaKnown RBP15.72■□□□□ 0.11
SF3B2-203ENST00000524627 ASCC2Q9H1I8 757 aaPredicted RBP15.72■□□□□ 0.11
SF3B2-203ENST00000524627 COL2A1P02458 1487 aaPredicted RBP15.71■□□□□ 0.11
SF3B2-203ENST00000524627 USP17L5A8MUK1 530 aa15.71■□□□□ 0.11
SF3B2-203ENST00000524627 MAP4K4O95819 1239 aaPredicted RBP15.71■□□□□ 0.11
SF3B2-203ENST00000524627 HMGCRP04035 888 aa15.71■□□□□ 0.11
SF3B2-203ENST00000524627 CAPN2P17655 700 aa15.71■□□□□ 0.11
SF3B2-203ENST00000524627 PABPC4Q13310 644 aaKnown RBP eCLIP15.71■□□□□ 0.11
SF3B2-203ENST00000524627 NECAB2Q7Z6G3 386 aa15.71■□□□□ 0.11
SF3B2-203ENST00000524627 TBC1D2Q9BYX2 928 aa15.71■□□□□ 0.11
SF3B2-203ENST00000524627 STAP2Q9UGK3 403 aa15.71■□□□□ 0.11
SF3B2-203ENST00000524627 COL6A3P12111 3177 aa15.71■□□□□ 0.11
SF3B2-203ENST00000524627 ALPK3Q96L96 1907 aa15.7■□□□□ 0.1
SF3B2-203ENST00000524627 ARID4AP29374 1257 aaPredicted RBP15.7■□□□□ 0.1
SF3B2-203ENST00000524627 MCAMP43121 646 aa15.7■□□□□ 0.1
SF3B2-203ENST00000524627 TRIM32Q13049 653 aa15.7■□□□□ 0.1
SF3B2-203ENST00000524627 SH3RF3Q8TEJ3 882 aaPredicted RBP15.7■□□□□ 0.1
SF3B2-203ENST00000524627 LRP2BPQ9P2M1 347 aa15.7■□□□□ 0.1
SF3B2-203ENST00000524627 A0A1W2PPC1 479 aa15.69■□□□□ 0.1
SF3B2-203ENST00000524627 SOX1O00570 391 aaPredicted RBP15.69■□□□□ 0.1
SF3B2-203ENST00000524627 G3BP1Q13283 466 aaKnown RBP eCLIP15.69■□□□□ 0.13e-7■□□□□ 10
SF3B2-203ENST00000524627 MTMR2Q13614 643 aa15.69■□□□□ 0.1
SF3B2-203ENST00000524627 SH3D19Q5HYK7 790 aa15.69■□□□□ 0.1
SF3B2-203ENST00000524627 C7orf61Q8IZ16 206 aa15.69■□□□□ 0.1
SF3B2-203ENST00000524627 ARHGAP45Q92619 1136 aa15.69■□□□□ 0.1
SF3B2-203ENST00000524627 NOL10Q9BSC4 688 aaKnown RBP15.69■□□□□ 0.1
SF3B2-203ENST00000524627 AS3MTQ9HBK9 375 aa15.69■□□□□ 0.1
SF3B2-203ENST00000524627 HERC5Q9UII4 1024 aaKnown RBP15.69■□□□□ 0.1
SF3B2-203ENST00000524627 GJD2Q9UKL4 321 aa15.69■□□□□ 0.1
SF3B2-203ENST00000524627 GNAI2P04899 355 aa15.68■□□□□ 0.1
SF3B2-203ENST00000524627 IRX3P78415 501 aaPredicted RBP15.68■□□□□ 0.1
SF3B2-203ENST00000524627 LRCH3Q96II8 777 aa15.68■□□□□ 0.1
SF3B2-203ENST00000524627 HMX1Q9NP08 348 aaPredicted RBP15.68■□□□□ 0.1
SF3B2-203ENST00000524627 AATFQ9NY61 560 aaKnown RBP eCLIP15.68■□□□□ 0.1
SF3B2-203ENST00000524627 PI4KBQ9UBF8 816 aa15.68■□□□□ 0.1
SF3B2-203ENST00000524627 RPTORQ8N122 1335 aa15.68■□□□□ 0.1
SF3B2-203ENST00000524627 SIPA1L1O43166 1804 aa15.67■□□□□ 0.1
SF3B2-203ENST00000524627 PNMA6EA0A0J9YXQ4 647 aa15.67■□□□□ 0.1
SF3B2-203ENST00000524627 PEX10O60683 326 aa15.67■□□□□ 0.1
SF3B2-203ENST00000524627 UQCRFS1P1P0C7P4 283 aa15.67■□□□□ 0.1
SF3B2-203ENST00000524627 NAA16Q6N069 864 aaPredicted RBP15.67■□□□□ 0.1
SF3B2-203ENST00000524627 ANKLE1Q8NAG6 615 aa15.67■□□□□ 0.1
SF3B2-203ENST00000524627 SNRKQ9NRH2 765 aa15.67■□□□□ 0.1
SF3B2-203ENST00000524627 TMOD4Q9NZQ9 345 aa15.67■□□□□ 0.1
SF3B2-203ENST00000524627 MORF4L1Q9UBU8 362 aa15.67■□□□□ 0.1
SF3B2-203ENST00000524627 ZMYND8Q9ULU4 1186 aaPredicted RBP15.67■□□□□ 0.1
SF3B2-203ENST00000524627 TNNQ9UQP3 1299 aa15.67■□□□□ 0.1
SF3B2-203ENST00000524627 PLXNB2O15031 1838 aa15.66■□□□□ 0.1
SF3B2-203ENST00000524627 BAG3O95817 575 aa15.66■□□□□ 0.1
SF3B2-203ENST00000524627 ASNSP08243 561 aa15.66■□□□□ 0.1
SF3B2-203ENST00000524627 TRIM27P14373 513 aa15.66■□□□□ 0.1
SF3B2-203ENST00000524627 CYP2B6P20813 491 aa15.66■□□□□ 0.1
SF3B2-203ENST00000524627 BACE1P56817 501 aa15.66■□□□□ 0.1
SF3B2-203ENST00000524627 JAG1P78504 1218 aa15.66■□□□□ 0.1
SF3B2-203ENST00000524627 SHROOM1Q2M3G4 852 aaPredicted RBP15.66■□□□□ 0.1
SF3B2-203ENST00000524627 MAPKAPK5Q8IW41 473 aa15.66■□□□□ 0.1
SF3B2-203ENST00000524627 TGFBRAP1Q8WUH2 860 aa15.66■□□□□ 0.1
SF3B2-203ENST00000524627 TRIB2Q92519 343 aa15.66■□□□□ 0.1
SF3B2-203ENST00000524627 P2RX7Q99572 595 aaKnown RBP15.66■□□□□ 0.1
SF3B2-203ENST00000524627 WDR18Q9BV38 432 aa15.66■□□□□ 0.1
SF3B2-203ENST00000524627 NBPF3Q9H094 633 aa15.66■□□□□ 0.1
SF3B2-203ENST00000524627 DHX36Q9H2U1 1008 aaKnown RBP15.66■□□□□ 0.1
SF3B2-203ENST00000524627 DDX60LQ5H9U9 1706 aaKnown RBP15.65■□□□□ 0.1
SF3B2-203ENST00000524627 MAST2Q6P0Q8 1798 aa15.65■□□□□ 0.1
SF3B2-203ENST00000524627 PLCG2P16885 1265 aa15.65■□□□□ 0.1
SF3B2-203ENST00000524627 TTC39AQ5SRH9 613 aa15.65■□□□□ 0.1
SF3B2-203ENST00000524627 CRACR2BQ8N4Y2 399 aaPredicted RBP15.65■□□□□ 0.1
SF3B2-203ENST00000524627 SLC17A8Q8NDX2 589 aa15.65■□□□□ 0.1
SF3B2-203ENST00000524627 FRAT1Q92837 279 aaPredicted RBP15.65■□□□□ 0.1
SF3B2-203ENST00000524627 GDF15Q99988 308 aa15.65■□□□□ 0.1
SF3B2-203ENST00000524627 TRIM34Q9BYJ4 488 aa15.65■□□□□ 0.1
SF3B2-203ENST00000524627 DNAJC18Q9H819 358 aa15.65■□□□□ 0.1
SF3B2-203ENST00000524627 TXNRD2Q9NNW7 524 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms