RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 CCDC158Q5M9N0 1113 aa19.98■□□□□ 0.79
HIF3A-208ENST00000524533 SSH3Q8TE77 659 aa19.98■□□□□ 0.79
HIF3A-208ENST00000524533 DBNDD2Q9BQY9 259 aa19.98■□□□□ 0.79
HIF3A-208ENST00000524533 SNRKQ9NRH2 765 aa19.98■□□□□ 0.79
HIF3A-208ENST00000524533 AGTPBP1Q9UPW5 1226 aa19.98■□□□□ 0.79
HIF3A-208ENST00000524533 NAA16Q6N069 864 aaPredicted RBP19.97■□□□□ 0.79
HIF3A-208ENST00000524533 SH3RF3Q8TEJ3 882 aaPredicted RBP19.97■□□□□ 0.79
HIF3A-208ENST00000524533 C1orf115Q9H7X2 142 aa19.97■□□□□ 0.79
HIF3A-208ENST00000524533 BIN2Q9UBW5 565 aaPredicted RBP19.97■□□□□ 0.79
HIF3A-208ENST00000524533 MYO5AQ9Y4I1 1855 aaKnown RBP19.96■□□□□ 0.79
HIF3A-208ENST00000524533 SURF6O75683 361 aaKnown RBP19.96■□□□□ 0.79
HIF3A-208ENST00000524533 UBXN2AP68543 259 aa19.96■□□□□ 0.79
HIF3A-208ENST00000524533 ATP8B2P98198 1209 aa19.96■□□□□ 0.79
HIF3A-208ENST00000524533 SLAIN1Q8ND83 568 aa19.96■□□□□ 0.79
HIF3A-208ENST00000524533 SHISA4Q96DD7 197 aa19.96■□□□□ 0.79
HIF3A-208ENST00000524533 AATFQ9NY61 560 aaKnown RBP eCLIP19.96■□□□□ 0.79
HIF3A-208ENST00000524533 HERC5Q9UII4 1024 aaKnown RBP19.96■□□□□ 0.79
HIF3A-208ENST00000524533 PNMA3Q9UL41 463 aa19.96■□□□□ 0.79
HIF3A-208ENST00000524533 BAG3O95817 575 aa19.95■□□□□ 0.78
HIF3A-208ENST00000524533 CCL5P13501 91 aa19.95■□□□□ 0.78
HIF3A-208ENST00000524533 HABP4Q5JVS0 413 aaKnown RBP19.95■□□□□ 0.78
HIF3A-208ENST00000524533 TREML2Q5T2D2 321 aa19.95■□□□□ 0.78
HIF3A-208ENST00000524533 ITPRIPQ8IWB1 547 aa19.95■□□□□ 0.78
HIF3A-208ENST00000524533 PROCA1Q8NCQ7 364 aaPredicted RBP19.95■□□□□ 0.78
HIF3A-208ENST00000524533 NKX2-3Q8TAU0 364 aa19.95■□□□□ 0.78
HIF3A-208ENST00000524533 TBC1D2Q9BYX2 928 aa19.95■□□□□ 0.78
HIF3A-208ENST00000524533 GABRQQ9UN88 632 aa19.95■□□□□ 0.78
HIF3A-208ENST00000524533 TNPO2O14787 897 aaKnown RBP19.94■□□□□ 0.78
HIF3A-208ENST00000524533 PLCG2P16885 1265 aa19.94■□□□□ 0.78
HIF3A-208ENST00000524533 CAP2P40123 477 aa19.94■□□□□ 0.78
HIF3A-208ENST00000524533 SPP2Q13103 211 aa19.94■□□□□ 0.78
HIF3A-208ENST00000524533 ZNF280CQ8ND82 737 aa19.94■□□□□ 0.78
HIF3A-208ENST00000524533 DHX36Q9H2U1 1008 aaKnown RBP19.94■□□□□ 0.78
HIF3A-208ENST00000524533 CYP2E1P05181 493 aaPredicted RBP19.93■□□□□ 0.78
HIF3A-208ENST00000524533 ANKRD13CQ8N6S4 541 aa19.93■□□□□ 0.78
HIF3A-208ENST00000524533 RNF208Q9H0X6 261 aa19.93■□□□□ 0.78
HIF3A-208ENST00000524533 PI4KBQ9UBF8 816 aa19.93■□□□□ 0.78
HIF3A-208ENST00000524533 FLT1P17948 1338 aa19.93■□□□□ 0.78
HIF3A-208ENST00000524533 USP17L5A8MUK1 530 aa19.92■□□□□ 0.78
HIF3A-208ENST00000524533 ADCY3O60266 1144 aa19.92■□□□□ 0.78
HIF3A-208ENST00000524533 GJB1P08034 283 aa19.92■□□□□ 0.78
HIF3A-208ENST00000524533 RLBP1P12271 317 aa19.92■□□□□ 0.78
HIF3A-208ENST00000524533 ZAP70P43403 619 aa19.92■□□□□ 0.78
HIF3A-208ENST00000524533 GJA8P48165 433 aa19.92■□□□□ 0.78
HIF3A-208ENST00000524533 FLT3LGP49771 235 aa19.92■□□□□ 0.78
HIF3A-208ENST00000524533 HMGCS2P54868 508 aa19.92■□□□□ 0.78
HIF3A-208ENST00000524533 PABPC4Q13310 644 aaKnown RBP eCLIP19.92■□□□□ 0.78
HIF3A-208ENST00000524533 RRP1BQ14684 758 aaKnown RBP19.92■□□□□ 0.78
HIF3A-208ENST00000524533 ADGRA1Q86SQ6 560 aa19.92■□□□□ 0.78
HIF3A-208ENST00000524533 MAPKAPK5Q8IW41 473 aa19.92■□□□□ 0.78
HIF3A-208ENST00000524533 ZNF512BQ96KM6 892 aaPredicted RBP19.92■□□□□ 0.78
HIF3A-208ENST00000524533 AS3MTQ9HBK9 375 aa19.92■□□□□ 0.78
HIF3A-208ENST00000524533 DBNLQ9UJU6 430 aaKnown RBP19.92■□□□□ 0.78
HIF3A-208ENST00000524533 NOP58Q9Y2X3 529 aaKnown RBP19.92■□□□□ 0.78
HIF3A-208ENST00000524533 ZBTB7BO15156 539 aaPredicted RBP19.91■□□□□ 0.78
HIF3A-208ENST00000524533 IGSF3O75054 1194 aa19.91■□□□□ 0.78
HIF3A-208ENST00000524533 PPP4CP60510 307 aa19.91■□□□□ 0.78
HIF3A-208ENST00000524533 FAM110CQ1W6H9 321 aa19.91■□□□□ 0.78
HIF3A-208ENST00000524533 TGFBRAP1Q8WUH2 860 aa19.91■□□□□ 0.78
HIF3A-208ENST00000524533 PIH1D3Q9NQM4 214 aaKnown RBP19.91■□□□□ 0.78
HIF3A-208ENST00000524533 TLR7Q9NYK1 1049 aaKnown RBP19.91■□□□□ 0.78
HIF3A-208ENST00000524533 ELNP15502 786 aa19.9■□□□□ 0.78
HIF3A-208ENST00000524533 IRF5Q13568 498 aa19.9■□□□□ 0.78
HIF3A-208ENST00000524533 CRACR2BQ8N4Y2 399 aaPredicted RBP19.9■□□□□ 0.78
HIF3A-208ENST00000524533 COA7Q96BR5 231 aa19.9■□□□□ 0.78
HIF3A-208ENST00000524533 TRIM34Q9BYJ4 488 aa19.9■□□□□ 0.78
HIF3A-208ENST00000524533 UNC93B1Q9H1C4 597 aa19.9■□□□□ 0.78
HIF3A-208ENST00000524533 INHAP05111 366 aa19.89■□□□□ 0.77
HIF3A-208ENST00000524533 GCLCP48506 637 aaPredicted RBP19.89■□□□□ 0.77
HIF3A-208ENST00000524533 SH3D19Q5HYK7 790 aa19.89■□□□□ 0.77
HIF3A-208ENST00000524533 MIER1Q8N108 512 aa19.89■□□□□ 0.77
HIF3A-208ENST00000524533 PXYLP1Q8TE99 480 aa19.89■□□□□ 0.77
HIF3A-208ENST00000524533 CCDC8Q9H0W5 538 aaPredicted RBP19.89■□□□□ 0.77
HIF3A-208ENST00000524533 TAOK2Q9UL54 1235 aa19.89■□□□□ 0.77
HIF3A-208ENST00000524533 MYH1P12882 1939 aa19.88■□□□□ 0.77
HIF3A-208ENST00000524533 ASNSP08243 561 aa19.88■□□□□ 0.77
HIF3A-208ENST00000524533 MTMR2Q13614 643 aa19.88■□□□□ 0.77
HIF3A-208ENST00000524533 U2AF1L4Q8WU68 220 aaKnown RBP19.88■□□□□ 0.77
HIF3A-208ENST00000524533 EAF2Q96CJ1 260 aaPredicted RBP19.88■□□□□ 0.77
HIF3A-208ENST00000524533 DNAJC18Q9H819 358 aa19.88■□□□□ 0.77
HIF3A-208ENST00000524533 CEP290O15078 2479 aa19.87■□□□□ 0.77
HIF3A-208ENST00000524533 H0YGN5 161 aa19.87■□□□□ 0.77
HIF3A-208ENST00000524533 IDH1O75874 414 aaKnown RBP19.87■□□□□ 0.77
HIF3A-208ENST00000524533 HLA-DOAP06340 250 aa19.87■□□□□ 0.77
HIF3A-208ENST00000524533 CEP85Q6P2H3 762 aa19.87■□□□□ 0.77
HIF3A-208ENST00000524533 DPF3Q92784 378 aa19.87■□□□□ 0.77
HIF3A-208ENST00000524533 WDR18Q9BV38 432 aa19.87■□□□□ 0.77
HIF3A-208ENST00000524533 ASCC2Q9H1I8 757 aaPredicted RBP19.87■□□□□ 0.77
HIF3A-208ENST00000524533 SAP30BPQ9UHR5 308 aaKnown RBP19.87■□□□□ 0.77
HIF3A-208ENST00000524533 PALD1Q9ULE6 856 aa19.87■□□□□ 0.77
HIF3A-208ENST00000524533 COLQQ9Y215 455 aaPredicted RBP19.87■□□□□ 0.77
HIF3A-208ENST00000524533 FARP2O94887 1054 aaPredicted RBP19.86■□□□□ 0.77
HIF3A-208ENST00000524533 GDF11O95390 407 aa19.86■□□□□ 0.77
HIF3A-208ENST00000524533 CYP7A1P22680 504 aa19.86■□□□□ 0.77
HIF3A-208ENST00000524533 DYNLL1P63167 89 aaKnown RBP19.86■□□□□ 0.77
HIF3A-208ENST00000524533 UBE2Q1Q7Z7E8 422 aa19.86■□□□□ 0.77
HIF3A-208ENST00000524533 METTL16Q86W50 562 aaKnown RBP19.86■□□□□ 0.77
HIF3A-208ENST00000524533 FOXP4Q8IVH2 680 aaPredicted RBP19.86■□□□□ 0.77
HIF3A-208ENST00000524533 HTATIP2Q9BUP3 242 aa19.86■□□□□ 0.77
HIF3A-208ENST00000524533 TMOD4Q9NZQ9 345 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms