RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 METTL12A8MUP2 240 aa8.45□□□□□ -1.06
LINC00534-203ENST00000523406 FYB1O15117 783 aa8.45□□□□□ -1.06
LINC00534-203ENST00000523406 BCRP11274 1271 aa8.45□□□□□ -1.06
LINC00534-203ENST00000523406 XRCC5P13010 732 aaKnown RBP8.45□□□□□ -1.06
LINC00534-203ENST00000523406 ITPKAP23677 461 aa8.45□□□□□ -1.06
LINC00534-203ENST00000523406 GSTT1P30711 240 aa8.45□□□□□ -1.06
LINC00534-203ENST00000523406 FCGRTP55899 365 aa8.45□□□□□ -1.06
LINC00534-203ENST00000523406 IRX6P78412 446 aaPredicted RBP8.45□□□□□ -1.06
LINC00534-203ENST00000523406 PTPN12Q05209 780 aaKnown RBP8.45□□□□□ -1.06
LINC00534-203ENST00000523406 ERICH6BQ5W0A0 696 aa8.45□□□□□ -1.06
LINC00534-203ENST00000523406 CCDC146Q8IYE0 955 aa8.45□□□□□ -1.06
LINC00534-203ENST00000523406 TMEM87AQ8NBN3 555 aa8.45□□□□□ -1.06
LINC00534-203ENST00000523406 GALNT6Q8NCL4 622 aa8.45□□□□□ -1.06
LINC00534-203ENST00000523406 SETD1AO15047 1707 aaKnown RBP8.45□□□□□ -1.06
LINC00534-203ENST00000523406 USP32Q8NFA0 1604 aa8.44□□□□□ -1.06
LINC00534-203ENST00000523406 SHISA8B8ZZ34 492 aa8.44□□□□□ -1.06
LINC00534-203ENST00000523406 CELA2BP08218 269 aaPredicted RBP8.44□□□□□ -1.06
LINC00534-203ENST00000523406 TCF3P15923 654 aa8.44□□□□□ -1.06
LINC00534-203ENST00000523406 GRIK5Q16478 980 aa8.44□□□□□ -1.06
LINC00534-203ENST00000523406 SPRED3Q2MJR0 410 aa8.44□□□□□ -1.06
LINC00534-203ENST00000523406 KANK3Q6NY19 840 aa8.44□□□□□ -1.06
LINC00534-203ENST00000523406 LYPD4Q6UWN0 246 aa8.44□□□□□ -1.06
LINC00534-203ENST00000523406 MICALL1Q8N3F8 863 aa8.44□□□□□ -1.06
LINC00534-203ENST00000523406 NGEFQ8N5V2 710 aa8.44□□□□□ -1.06
LINC00534-203ENST00000523406 ANKRD24Q8TF21 1146 aa8.44□□□□□ -1.06
LINC00534-203ENST00000523406 USP31Q70CQ4 1352 aa8.44□□□□□ -1.06
LINC00534-203ENST00000523406 MED14O60244 1454 aa8.44□□□□□ -1.06
LINC00534-203ENST00000523406 ATP7BP35670 1465 aa8.44□□□□□ -1.06
LINC00534-203ENST00000523406 CPS1P31327 1500 aa8.44□□□□□ -1.06
LINC00534-203ENST00000523406 CEP170BQ9Y4F5 1589 aaPredicted RBP8.44□□□□□ -1.06
LINC00534-203ENST00000523406 A0A096LPE4 126 aa8.43□□□□□ -1.06
LINC00534-203ENST00000523406 A0A1W2PPZ6 126 aa8.43□□□□□ -1.06
LINC00534-203ENST00000523406 APAF1O14727 1248 aa8.43□□□□□ -1.06
LINC00534-203ENST00000523406 SCAMP3O14828 347 aaKnown RBP8.43□□□□□ -1.06
LINC00534-203ENST00000523406 ALBP02768 609 aa8.43□□□□□ -1.06
LINC00534-203ENST00000523406 U2AF1L5P0DN76 240 aaPredicted RBP8.43□□□□□ -1.06
LINC00534-203ENST00000523406 ST13P50502 369 aaKnown RBP8.43□□□□□ -1.06
LINC00534-203ENST00000523406 U2AF1Q01081 240 aaKnown RBP eCLIP8.43□□□□□ -1.062e-14■■■□□ 14.7
LINC00534-203ENST00000523406 MEI1Q5TIA1 1274 aa8.43□□□□□ -1.06
LINC00534-203ENST00000523406 COG3Q96JB2 828 aa8.43□□□□□ -1.06
LINC00534-203ENST00000523406 BTBD6Q96KE9 485 aa8.43□□□□□ -1.06
LINC00534-203ENST00000523406 ADAM19Q9H013 955 aa8.43□□□□□ -1.06
LINC00534-203ENST00000523406 TRIM33Q9UPN9 1127 aa8.43□□□□□ -1.06
LINC00534-203ENST00000523406 PIK3R4Q99570 1358 aa8.43□□□□□ -1.06
LINC00534-203ENST00000523406 U2SURPO15042 1029 aaKnown RBP8.42□□□□□ -1.06
LINC00534-203ENST00000523406 PPM1GO15355 546 aaPredicted RBP8.42□□□□□ -1.06
LINC00534-203ENST00000523406 RGS9O75916 674 aaPredicted RBP8.42□□□□□ -1.06
LINC00534-203ENST00000523406 FANCCQ00597 558 aa8.42□□□□□ -1.06
LINC00534-203ENST00000523406 TAF1CQ15572 869 aaPredicted RBP8.42□□□□□ -1.06
LINC00534-203ENST00000523406 DTHD1Q6ZMT9 781 aa8.42□□□□□ -1.06
LINC00534-203ENST00000523406 CHSY3Q70JA7 882 aa8.42□□□□□ -1.06
LINC00534-203ENST00000523406 WHAMMQ8TF30 809 aa8.42□□□□□ -1.06
LINC00534-203ENST00000523406 NUDT8Q8WV74 236 aa8.42□□□□□ -1.06
LINC00534-203ENST00000523406 BSNDQ8WZ55 320 aa8.42□□□□□ -1.06
LINC00534-203ENST00000523406 RUNDC1Q96C34 613 aa8.42□□□□□ -1.06
LINC00534-203ENST00000523406 ZFYVE1Q9HBF4 777 aa8.42□□□□□ -1.06
LINC00534-203ENST00000523406 METTL5Q9NRN9 209 aaKnown RBP8.42□□□□□ -1.06
LINC00534-203ENST00000523406 PPM1HQ9ULR3 514 aa8.42□□□□□ -1.06
LINC00534-203ENST00000523406 SOX13Q9UN79 622 aa8.42□□□□□ -1.06
LINC00534-203ENST00000523406 EDC4Q6P2E9 1401 aaKnown RBP8.42□□□□□ -1.06
LINC00534-203ENST00000523406 PTPRUQ92729 1446 aa8.42□□□□□ -1.06
LINC00534-203ENST00000523406 CD163L1Q9NR16 1453 aa8.42□□□□□ -1.06
LINC00534-203ENST00000523406 DIP2AQ14689 1571 aa8.42□□□□□ -1.06
LINC00534-203ENST00000523406 KNDC1Q76NI1 1749 aa8.42□□□□□ -1.06
LINC00534-203ENST00000523406 SETD1BQ9UPS6 1966 aaKnown RBP8.41□□□□□ -1.06
LINC00534-203ENST00000523406 ADAMTSL3P82987 1691 aa8.41□□□□□ -1.06
LINC00534-203ENST00000523406 PTCH1Q13635 1447 aa8.41□□□□□ -1.06
LINC00534-203ENST00000523406 KCNA6P17658 529 aa8.41□□□□□ -1.06
LINC00534-203ENST00000523406 PTPRAP18433 802 aa8.41□□□□□ -1.06
LINC00534-203ENST00000523406 NME9Q86XW9 330 aa8.41□□□□□ -1.06
LINC00534-203ENST00000523406 NGDNQ8NEJ9 315 aaKnown RBP8.41□□□□□ -1.06
LINC00534-203ENST00000523406 ASAP3Q8TDY4 903 aa8.41□□□□□ -1.06
LINC00534-203ENST00000523406 MUC3BQ9H195 1237 aa8.41□□□□□ -1.06
LINC00534-203ENST00000523406 PNNQ9H307 717 aaKnown RBP8.41□□□□□ -1.06
LINC00534-203ENST00000523406 ZNF576Q9H609 170 aa8.41□□□□□ -1.06
LINC00534-203ENST00000523406 JPH1Q9HDC5 661 aaPredicted RBP8.41□□□□□ -1.06
LINC00534-203ENST00000523406 RCAN3Q9UKA8 241 aa8.41□□□□□ -1.06
LINC00534-203ENST00000523406 ACEP12821 1306 aa8.4□□□□□ -1.06
LINC00534-203ENST00000523406 PRR36Q9H6K5 1346 aa8.4□□□□□ -1.06
LINC00534-203ENST00000523406 DIAPH1O60610 1272 aaKnown RBP8.4□□□□□ -1.06
LINC00534-203ENST00000523406 AFF1P51825 1210 aaKnown RBP8.4□□□□□ -1.06
LINC00534-203ENST00000523406 HDLBPQ00341 1268 aaKnown RBP8.4□□□□□ -1.06
LINC00534-203ENST00000523406 RPS26P11Q5JNZ5 115 aaPredicted RBP8.4□□□□□ -1.06
LINC00534-203ENST00000523406 VN1R5Q7Z5H4 357 aa8.4□□□□□ -1.06
LINC00534-203ENST00000523406 CACTIN-AS1Q8N1I8 211 aa8.4□□□□□ -1.06
LINC00534-203ENST00000523406 LACRTQ9GZZ8 138 aa8.4□□□□□ -1.06
LINC00534-203ENST00000523406 PRDM6Q9NQX0 595 aa8.4□□□□□ -1.06
LINC00534-203ENST00000523406 AKAP2Q9Y2D5 859 aa8.4□□□□□ -1.06
LINC00534-203ENST00000523406 CPSF1Q10570 1443 aaKnown RBP8.39□□□□□ -1.07
LINC00534-203ENST00000523406 M0R082 166 aa8.39□□□□□ -1.07
LINC00534-203ENST00000523406 NEFMP07197 916 aa8.39□□□□□ -1.07
LINC00534-203ENST00000523406 BAG6P46379 1132 aa8.39□□□□□ -1.07
LINC00534-203ENST00000523406 ZNF385CQ66K41 422 aaPredicted RBP8.39□□□□□ -1.07
LINC00534-203ENST00000523406 C8orf86Q6ZUL3 223 aa8.39□□□□□ -1.07
LINC00534-203ENST00000523406 METTL16Q86W50 562 aaKnown RBP8.39□□□□□ -1.07
LINC00534-203ENST00000523406 ZNF417Q8TAU3 575 aa8.39□□□□□ -1.07
LINC00534-203ENST00000523406 ZNF587Q96SQ5 575 aaPredicted RBP8.39□□□□□ -1.07
LINC00534-203ENST00000523406 NPHP4O75161 1426 aaPredicted RBP8.38□□□□□ -1.07
LINC00534-203ENST00000523406 TTC21BQ7Z4L5 1316 aa8.38□□□□□ -1.07
LINC00534-203ENST00000523406 MAPK8IP3Q9UPT6 1336 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms