RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 KRT23Q9C075 422 aa7.93□□□□□ -1.14
PVT1-217ENST00000523190 RNF41Q9H4P4 317 aaPredicted RBP7.93□□□□□ -1.14
PVT1-217ENST00000523190 CNNM2Q9H8M5 875 aa7.93□□□□□ -1.14
PVT1-217ENST00000523190 DDX4Q9NQI0 724 aaKnown RBP7.93□□□□□ -1.14
PVT1-217ENST00000523190 SH2B1Q9NRF2 756 aaPredicted RBP7.93□□□□□ -1.14
PVT1-217ENST00000523190 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.93□□□□□ -1.14
PVT1-217ENST00000523190 FOCADQ5VW36 1801 aa7.93□□□□□ -1.14
PVT1-217ENST00000523190 MYO3BQ8WXR4 1341 aa7.93□□□□□ -1.14
PVT1-217ENST00000523190 SH2B2O14492 632 aaPredicted RBP7.92□□□□□ -1.14
PVT1-217ENST00000523190 DTNBO60941 627 aa7.92□□□□□ -1.14
PVT1-217ENST00000523190 PRDM1O75626 825 aa7.92□□□□□ -1.14
PVT1-217ENST00000523190 WDHD1O75717 1129 aaPredicted RBP7.92□□□□□ -1.14
PVT1-217ENST00000523190 POLR3DP05423 398 aaPredicted RBP7.92□□□□□ -1.14
PVT1-217ENST00000523190 CACNB3P54284 484 aa7.92□□□□□ -1.14
PVT1-217ENST00000523190 CFAP100Q494V2 611 aa7.92□□□□□ -1.14
PVT1-217ENST00000523190 AMOTL1Q8IY63 956 aa7.92□□□□□ -1.14
PVT1-217ENST00000523190 DYNLL2Q96FJ2 89 aa7.92□□□□□ -1.14
PVT1-217ENST00000523190 INTS4Q96HW7 963 aaKnown RBP7.92□□□□□ -1.14
PVT1-217ENST00000523190 GMLQ99445 158 aa7.92□□□□□ -1.14
PVT1-217ENST00000523190 ZKSCAN3Q9BRR0 538 aa7.92□□□□□ -1.14
PVT1-217ENST00000523190 SYT17Q9BSW7 474 aa7.92□□□□□ -1.14
PVT1-217ENST00000523190 CHMP5Q9NZZ3 219 aa7.92□□□□□ -1.14
PVT1-217ENST00000523190 ZSWIM5Q9P217 1185 aa7.92□□□□□ -1.14
PVT1-217ENST00000523190 SERPINA10Q9UK55 444 aa7.92□□□□□ -1.14
PVT1-217ENST00000523190 HDAC9Q9UKV0 1011 aa7.92□□□□□ -1.14
PVT1-217ENST00000523190 NAP1L2Q9ULW6 460 aaPredicted RBP7.92□□□□□ -1.14
PVT1-217ENST00000523190 WDR19Q8NEZ3 1342 aa7.92□□□□□ -1.14
PVT1-217ENST00000523190 ROBO3Q96MS0 1386 aa7.92□□□□□ -1.14
PVT1-217ENST00000523190 KLF18A0A0U1RQI7 1052 aa7.91□□□□□ -1.14
PVT1-217ENST00000523190 STK25O00506 426 aa7.91□□□□□ -1.14
PVT1-217ENST00000523190 IFIT3O14879 490 aaKnown RBP7.91□□□□□ -1.14
PVT1-217ENST00000523190 ORC4O43929 436 aa7.91□□□□□ -1.14
PVT1-217ENST00000523190 RANBP6O60518 1105 aaKnown RBP7.91□□□□□ -1.14
PVT1-217ENST00000523190 SLC3A2P08195 630 aaKnown RBP7.91□□□□□ -1.14
PVT1-217ENST00000523190 FGRP09769 529 aa7.91□□□□□ -1.14
PVT1-217ENST00000523190 PCP11498 1178 aaKnown RBP7.91□□□□□ -1.14
PVT1-217ENST00000523190 PLCD1P51178 756 aa7.91□□□□□ -1.14
PVT1-217ENST00000523190 NFIAQ12857 509 aa7.91□□□□□ -1.14
PVT1-217ENST00000523190 TMEM67Q5HYA8 995 aa7.91□□□□□ -1.14
PVT1-217ENST00000523190 ARHGAP27Q6ZUM4 889 aa7.91□□□□□ -1.14
PVT1-217ENST00000523190 RAB11FIP4Q86YS3 637 aa7.91□□□□□ -1.14
PVT1-217ENST00000523190 SLC44A5Q8NCS7 719 aa7.91□□□□□ -1.14
PVT1-217ENST00000523190 AGBL3Q8NEM8 1001 aa7.91□□□□□ -1.14
PVT1-217ENST00000523190 ESR2Q92731 530 aa7.91□□□□□ -1.14
PVT1-217ENST00000523190 GTF3C6Q969F1 213 aa7.91□□□□□ -1.14
PVT1-217ENST00000523190 TMEM87BQ96K49 555 aa7.91□□□□□ -1.14
PVT1-217ENST00000523190 MRIQ9BWK5 157 aa7.91□□□□□ -1.14
PVT1-217ENST00000523190 OSBPL5Q9H0X9 879 aaPredicted RBP7.91□□□□□ -1.14
PVT1-217ENST00000523190 TDRD3Q9H7E2 651 aaKnown RBP7.91□□□□□ -1.14
PVT1-217ENST00000523190 SENP2Q9HC62 589 aa7.91□□□□□ -1.14
PVT1-217ENST00000523190 BRPF3Q9ULD4 1205 aa7.91□□□□□ -1.14
PVT1-217ENST00000523190 ANGEL1Q9UNK9 670 aaKnown RBP7.91□□□□□ -1.14
PVT1-217ENST00000523190 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.91□□□□□ -1.14
PVT1-217ENST00000523190 ECM29Q5VYK3 1845 aa7.91□□□□□ -1.14
PVT1-217ENST00000523190 MYH1P12882 1939 aa7.91□□□□□ -1.14
PVT1-217ENST00000523190 ZNF541Q9H0D2 1346 aa7.9□□□□□ -1.14
PVT1-217ENST00000523190 SHTN1A0MZ66 631 aa7.9□□□□□ -1.14
PVT1-217ENST00000523190 GOLGA8BA8MQT2 603 aa7.9□□□□□ -1.14
PVT1-217ENST00000523190 FZD9O00144 591 aa7.9□□□□□ -1.14
PVT1-217ENST00000523190 PFKFB2O60825 505 aa7.9□□□□□ -1.14
PVT1-217ENST00000523190 PDIA3P30101 505 aaKnown RBP7.9□□□□□ -1.14
PVT1-217ENST00000523190 EIF6P56537 245 aaKnown RBP7.9□□□□□ -1.14
PVT1-217ENST00000523190 CCT2P78371 535 aaKnown RBP7.9□□□□□ -1.14
PVT1-217ENST00000523190 PDE4BQ07343 736 aa7.9□□□□□ -1.14
PVT1-217ENST00000523190 SCRN1Q12765 414 aa7.9□□□□□ -1.14
PVT1-217ENST00000523190 TCP10Q12799 353 aa7.9□□□□□ -1.14
PVT1-217ENST00000523190 TNIP1Q15025 636 aa7.9□□□□□ -1.14
PVT1-217ENST00000523190 FAM47AQ5JRC9 791 aa7.9□□□□□ -1.14
PVT1-217ENST00000523190 NFXL1Q6ZNB6 911 aa7.9□□□□□ -1.14
PVT1-217ENST00000523190 FBXL16Q8N461 479 aa7.9□□□□□ -1.14
PVT1-217ENST00000523190 IGDCC4Q8TDY8 1250 aa7.9□□□□□ -1.14
PVT1-217ENST00000523190 PRMT6Q96LA8 375 aaPredicted RBP7.9□□□□□ -1.14
PVT1-217ENST00000523190 LY9Q9HBG7 655 aa7.9□□□□□ -1.14
PVT1-217ENST00000523190 NCOA5Q9HCD5 579 aaKnown RBP7.9□□□□□ -1.14
PVT1-217ENST00000523190 CWC22Q9HCG8 908 aaKnown RBP7.9□□□□□ -1.14
PVT1-217ENST00000523190 FAM198AQ9UFP1 575 aa7.9□□□□□ -1.14
PVT1-217ENST00000523190 SMC3Q9UQE7 1217 aa7.9□□□□□ -1.14
PVT1-217ENST00000523190 GJA3Q9Y6H8 435 aa7.9□□□□□ -1.14
PVT1-217ENST00000523190 TNKSO95271 1327 aa7.89□□□□□ -1.15
PVT1-217ENST00000523190 CLRN2A0PK11 232 aa7.89□□□□□ -1.15
PVT1-217ENST00000523190 ERICH2A1L162 156 aa7.89□□□□□ -1.15
PVT1-217ENST00000523190 CCDC69A6NI79 296 aa7.89□□□□□ -1.15
PVT1-217ENST00000523190 TSPY2A6NKD2 308 aa7.89□□□□□ -1.15
PVT1-217ENST00000523190 JAK2O60674 1132 aa7.89□□□□□ -1.15
PVT1-217ENST00000523190 CHRM1P11229 460 aaPredicted RBP7.89□□□□□ -1.15
PVT1-217ENST00000523190 YBX3P16989 372 aaKnown RBP eCLIP7.89□□□□□ -1.151e-7■■□□□ 11.9
PVT1-217ENST00000523190 RXRAP19793 462 aa7.89□□□□□ -1.15
PVT1-217ENST00000523190 RASA1P20936 1047 aa7.89□□□□□ -1.15
PVT1-217ENST00000523190 GJB2P29033 226 aa7.89□□□□□ -1.15
PVT1-217ENST00000523190 CDK8P49336 464 aa7.89□□□□□ -1.15
PVT1-217ENST00000523190 GMPSP49915 693 aaPredicted RBP7.89□□□□□ -1.15
PVT1-217ENST00000523190 NUBP1P53384 320 aa7.89□□□□□ -1.15
PVT1-217ENST00000523190 EVCP57679 992 aa7.89□□□□□ -1.15
PVT1-217ENST00000523190 PKP1Q13835 747 aa7.89□□□□□ -1.15
PVT1-217ENST00000523190 WTAPQ15007 396 aa7.89□□□□□ -1.15
PVT1-217ENST00000523190 SART3Q15020 963 aaKnown RBP7.89□□□□□ -1.15
PVT1-217ENST00000523190 DLGAP5Q15398 846 aa7.89□□□□□ -1.15
PVT1-217ENST00000523190 SEC23AQ15436 765 aa7.89□□□□□ -1.15
PVT1-217ENST00000523190 APOA5Q6Q788 366 aa7.89□□□□□ -1.15
PVT1-217ENST00000523190 C16orf86Q6ZW13 317 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms