RNA–Protein interactions for RNA: ENST00000522777.1

PCM1-216, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-216ENST00000522777 PTPN11Q06124 597 aaPredicted RBP9.29□□□□□ -0.92
PCM1-216ENST00000522777 APOBRQ0VD83 1088 aa9.29□□□□□ -0.92
PCM1-216ENST00000522777 LRRC14Q15048 493 aa9.29□□□□□ -0.92
PCM1-216ENST00000522777 MPRIPQ6WCQ1 1025 aa9.29□□□□□ -0.92
PCM1-216ENST00000522777 ANKLE2Q86XL3 938 aa9.29□□□□□ -0.92
PCM1-216ENST00000522777 WFDC8Q8IUA0 241 aa9.29□□□□□ -0.92
PCM1-216ENST00000522777 SLITRK4Q8IW52 837 aa9.29□□□□□ -0.92
PCM1-216ENST00000522777 DDX54Q8TDD1 881 aaKnown RBP9.29□□□□□ -0.92
PCM1-216ENST00000522777 GATAD2BQ8WXI9 593 aa9.29□□□□□ -0.92
PCM1-216ENST00000522777 SLC7A3Q8WY07 619 aa9.29□□□□□ -0.92
PCM1-216ENST00000522777 OSGEPQ9NPF4 335 aa9.29□□□□□ -0.92
PCM1-216ENST00000522777 RGS17Q9UGC6 210 aaPredicted RBP9.29□□□□□ -0.92
PCM1-216ENST00000522777 KIDINS220Q9ULH0 1771 aa9.29□□□□□ -0.92
PCM1-216ENST00000522777 ROBO2Q9HCK4 1378 aa9.28□□□□□ -0.92
PCM1-216ENST00000522777 FSCN2O14926 492 aa9.28□□□□□ -0.92
PCM1-216ENST00000522777 ECEL1O95672 775 aa9.28□□□□□ -0.92
PCM1-216ENST00000522777 CELA2BP08218 269 aaPredicted RBP9.28□□□□□ -0.92
PCM1-216ENST00000522777 GSTP1P09211 210 aaKnown RBP9.28□□□□□ -0.92
PCM1-216ENST00000522777 GTF2F1P35269 517 aaKnown RBP eCLIP9.28□□□□□ -0.92
PCM1-216ENST00000522777 GSTM4Q03013 218 aa9.28□□□□□ -0.92
PCM1-216ENST00000522777 C19orf57Q0VDD7 668 aa9.28□□□□□ -0.92
PCM1-216ENST00000522777 SCARA3Q6AZY7 606 aa9.28□□□□□ -0.92
PCM1-216ENST00000522777 DNAJC2Q99543 621 aaKnown RBP9.28□□□□□ -0.92
PCM1-216ENST00000522777 CARD10Q9BWT7 1032 aa9.28□□□□□ -0.92
PCM1-216ENST00000522777 CBX8Q9HC52 389 aa9.28□□□□□ -0.92
PCM1-216ENST00000522777 SUPT6HQ7KZ85 1726 aaKnown RBP9.28□□□□□ -0.92
PCM1-216ENST00000522777 CLTCQ00610 1675 aaKnown RBP9.27□□□□□ -0.93
PCM1-216ENST00000522777 CILPO75339 1184 aa9.27□□□□□ -0.93
PCM1-216ENST00000522777 SELPP16109 830 aa9.27□□□□□ -0.93
PCM1-216ENST00000522777 DGKGP49619 791 aa9.27□□□□□ -0.93
PCM1-216ENST00000522777 COL9A2Q14055 689 aaPredicted RBP9.27□□□□□ -0.93
PCM1-216ENST00000522777 WHAMMQ8TF30 809 aa9.27□□□□□ -0.93
PCM1-216ENST00000522777 ITSN2Q9NZM3 1697 aa9.26□□□□□ -0.93
PCM1-216ENST00000522777 CDC42BPBQ9Y5S2 1711 aa9.26□□□□□ -0.93
PCM1-216ENST00000522777 SAMD9LQ8IVG5 1584 aa9.26□□□□□ -0.93
PCM1-216ENST00000522777 TLR3O15455 904 aaKnown RBP9.26□□□□□ -0.93
PCM1-216ENST00000522777 TRIM37O94972 964 aa9.26□□□□□ -0.93
PCM1-216ENST00000522777 CTSBP07858 339 aa9.26□□□□□ -0.93
PCM1-216ENST00000522777 LMNB1P20700 586 aa9.26□□□□□ -0.93
PCM1-216ENST00000522777 HNRNPMP52272 730 aaKnown RBP eCLIP9.26□□□□□ -0.93
PCM1-216ENST00000522777 RBL2Q08999 1139 aa9.26□□□□□ -0.93
PCM1-216ENST00000522777 MPP2Q14168 576 aa9.26□□□□□ -0.93
PCM1-216ENST00000522777 SETDB1Q15047 1291 aa9.26□□□□□ -0.93
PCM1-216ENST00000522777 FAM117BQ6P1L5 589 aa9.26□□□□□ -0.93
PCM1-216ENST00000522777 THEMISQ8N1K5 641 aaPredicted RBP9.26□□□□□ -0.93
PCM1-216ENST00000522777 GALNT11Q8NCW6 608 aa9.26□□□□□ -0.93
PCM1-216ENST00000522777 JARID2Q92833 1246 aaPredicted RBP9.26□□□□□ -0.93
PCM1-216ENST00000522777 NKD1Q969G9 470 aa9.26□□□□□ -0.93
PCM1-216ENST00000522777 DNMT1P26358 1616 aaKnown RBP9.26□□□□□ -0.93
PCM1-216ENST00000522777 A2MP01023 1474 aa9.26□□□□□ -0.93
PCM1-216ENST00000522777 PREX2Q70Z35 1606 aa9.25□□□□□ -0.93
PCM1-216ENST00000522777 ARL4DP49703 201 aa9.25□□□□□ -0.93
PCM1-216ENST00000522777 SEZ6Q53EL9 994 aa9.25□□□□□ -0.93
PCM1-216ENST00000522777 MAP1SQ66K74 1059 aaPredicted RBP9.25□□□□□ -0.93
PCM1-216ENST00000522777 KLHDC7BQ96G42 594 aa9.25□□□□□ -0.93
PCM1-216ENST00000522777 STRIP2Q9ULQ0 834 aa9.25□□□□□ -0.93
PCM1-216ENST00000522777 TNRQ92752 1358 aa9.24□□□□□ -0.93
PCM1-216ENST00000522777 ALKQ9UM73 1620 aa9.24□□□□□ -0.93
PCM1-216ENST00000522777 EIF4EBP3O60516 100 aaPredicted RBP9.24□□□□□ -0.93
PCM1-216ENST00000522777 CYP11A1P05108 521 aa9.24□□□□□ -0.93
PCM1-216ENST00000522777 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.24□□□□□ -0.93
PCM1-216ENST00000522777 REC114Q7Z4M0 266 aa9.24□□□□□ -0.93
PCM1-216ENST00000522777 LNPKQ9C0E8 428 aa9.24□□□□□ -0.93
PCM1-216ENST00000522777 NEURL4Q96JN8 1562 aa9.24□□□□□ -0.93
PCM1-216ENST00000522777 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.24□□□□□ -0.93
PCM1-216ENST00000522777 NPHP4O75161 1426 aaPredicted RBP9.23□□□□□ -0.93
PCM1-216ENST00000522777 ATP7AQ04656 1500 aa9.23□□□□□ -0.93
PCM1-216ENST00000522777 ADAM11O75078 769 aa9.23□□□□□ -0.93
PCM1-216ENST00000522777 DEAF1O75398 565 aaPredicted RBP9.23□□□□□ -0.93
PCM1-216ENST00000522777 AMPD1P23109 780 aa9.23□□□□□ -0.93
PCM1-216ENST00000522777 MAOBP27338 520 aa9.23□□□□□ -0.93
PCM1-216ENST00000522777 RPL6Q02878 288 aaKnown RBP9.23□□□□□ -0.93
PCM1-216ENST00000522777 POU4F3Q15319 338 aa9.23□□□□□ -0.93
PCM1-216ENST00000522777 DPH6Q7L8W6 267 aa9.23□□□□□ -0.93
PCM1-216ENST00000522777 MAP4K3Q8IVH8 894 aa9.23□□□□□ -0.93
PCM1-216ENST00000522777 DMRTC2Q8IXT2 367 aaPredicted RBP9.23□□□□□ -0.93
PCM1-216ENST00000522777 KLHL23Q8NBE8 558 aa9.23□□□□□ -0.93
PCM1-216ENST00000522777 GPBAR1Q8TDU6 330 aa9.23□□□□□ -0.93
PCM1-216ENST00000522777 KCNB2Q92953 911 aa9.23□□□□□ -0.93
PCM1-216ENST00000522777 CCDC86Q9H6F5 360 aaKnown RBP9.23□□□□□ -0.93
PCM1-216ENST00000522777 ZNF408Q9H9D4 720 aa9.23□□□□□ -0.93
PCM1-216ENST00000522777 KRT82Q9NSB4 513 aa9.23□□□□□ -0.93
PCM1-216ENST00000522777 VWDEQ8N2E2 1590 aa9.23□□□□□ -0.93
PCM1-216ENST00000522777 ARHGAP35Q9NRY4 1499 aa9.22□□□□□ -0.93
PCM1-216ENST00000522777 SYCP2Q9BX26 1530 aa9.22□□□□□ -0.93
PCM1-216ENST00000522777 WFS1O76024 890 aa9.22□□□□□ -0.93
PCM1-216ENST00000522777 STK10O94804 968 aaKnown RBP9.22□□□□□ -0.93
PCM1-216ENST00000522777 CDK8P49336 464 aa9.22□□□□□ -0.93
PCM1-216ENST00000522777 SUZ12Q15022 739 aaKnown RBP9.22□□□□□ -0.93
PCM1-216ENST00000522777 CWF19L2Q2TBE0 894 aaKnown RBP9.22□□□□□ -0.93
PCM1-216ENST00000522777 LCE2AQ5TA79 106 aaPredicted RBP9.22□□□□□ -0.93
PCM1-216ENST00000522777 ZNF385CQ66K41 422 aaPredicted RBP9.22□□□□□ -0.93
PCM1-216ENST00000522777 CORO1BQ9BR76 489 aa9.22□□□□□ -0.93
PCM1-216ENST00000522777 ZC3H12CQ9C0D7 883 aaKnown RBP9.22□□□□□ -0.93
PCM1-216ENST00000522777 PPT2Q9UMR5 302 aa9.22□□□□□ -0.93
PCM1-216ENST00000522777 POLR3KQ9Y2Y1 108 aaPredicted RBP9.22□□□□□ -0.93
PCM1-216ENST00000522777 PLXNC1O60486 1568 aa9.21□□□□□ -0.93
PCM1-216ENST00000522777 ZNF862O60290 1169 aa9.21□□□□□ -0.94
PCM1-216ENST00000522777 SSBP05455 408 aaKnown RBP eCLIP9.21□□□□□ -0.94
PCM1-216ENST00000522777 FOXD4L6Q3SYB3 417 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms