RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 SPP2Q13103 211 aa18.89■□□□□ 0.61
TRAPPC9-213ENST00000522504 SPATA5Q8NB90 893 aa18.89■□□□□ 0.61
TRAPPC9-213ENST00000522504 DEFB118Q96PH6 123 aa18.89■□□□□ 0.61
TRAPPC9-213ENST00000522504 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.89■□□□□ 0.618e-7■■■■■ 45.8
TRAPPC9-213ENST00000522504 OSBPL5Q9H0X9 879 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC9-213ENST00000522504 PAK6Q9NQU5 681 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC9-213ENST00000522504 TAOK2Q9UL54 1235 aa18.88■□□□□ 0.61
TRAPPC9-213ENST00000522504 TFRCP02786 760 aaKnown RBP18.87■□□□□ 0.61
TRAPPC9-213ENST00000522504 GNAI3P08754 354 aa18.87■□□□□ 0.61
TRAPPC9-213ENST00000522504 MCAMP43121 646 aa18.87■□□□□ 0.61
TRAPPC9-213ENST00000522504 FAM110CQ1W6H9 321 aa18.87■□□□□ 0.61
TRAPPC9-213ENST00000522504 ARHGAP45Q92619 1136 aa18.87■□□□□ 0.61
TRAPPC9-213ENST00000522504 CRISPLD2Q9H0B8 497 aa18.87■□□□□ 0.61
TRAPPC9-213ENST00000522504 PNMA6EA0A0J9YXQ4 647 aa18.86■□□□□ 0.61
TRAPPC9-213ENST00000522504 ARID4AP29374 1257 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC9-213ENST00000522504 HMGCS2P54868 508 aa18.86■□□□□ 0.61
TRAPPC9-213ENST00000522504 JAG1P78504 1218 aa18.86■□□□□ 0.61
TRAPPC9-213ENST00000522504 PROCA1Q8NCQ7 364 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC9-213ENST00000522504 ZNF280CQ8ND82 737 aa18.86■□□□□ 0.61
TRAPPC9-213ENST00000522504 SH3RF3Q8TEJ3 882 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC9-213ENST00000522504 RAI14Q9P0K7 980 aa18.86■□□□□ 0.61
TRAPPC9-213ENST00000522504 NR2E3Q9Y5X4 410 aa18.86■□□□□ 0.61
TRAPPC9-213ENST00000522504 DOCK3Q8IZD9 2030 aa18.86■□□□□ 0.61
TRAPPC9-213ENST00000522504 CAP2P40123 477 aa18.85■□□□□ 0.61
TRAPPC9-213ENST00000522504 TRIM32Q13049 653 aa18.85■□□□□ 0.61
TRAPPC9-213ENST00000522504 SHROOM1Q2M3G4 852 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC9-213ENST00000522504 DIS3LQ8TF46 1054 aaKnown RBP18.85■□□□□ 0.61
TRAPPC9-213ENST00000522504 COA7Q96BR5 231 aa18.85■□□□□ 0.61
TRAPPC9-213ENST00000522504 ASCC2Q9H1I8 757 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC9-213ENST00000522504 GJD2Q9UKL4 321 aa18.85■□□□□ 0.61
TRAPPC9-213ENST00000522504 COL2A1P02458 1487 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC9-213ENST00000522504 LAMA2P24043 3122 aaKnown RBP18.84■□□□□ 0.61
TRAPPC9-213ENST00000522504 PEX10O60683 326 aa18.84■□□□□ 0.61
TRAPPC9-213ENST00000522504 LDHCP07864 332 aa18.84■□□□□ 0.61
TRAPPC9-213ENST00000522504 TRIM27P14373 513 aa18.84■□□□□ 0.61
TRAPPC9-213ENST00000522504 GSTO1P78417 241 aa18.84■□□□□ 0.61
TRAPPC9-213ENST00000522504 GORABQ5T7V8 394 aa18.84■□□□□ 0.61
TRAPPC9-213ENST00000522504 TEX11Q8IYF3 940 aa18.84■□□□□ 0.61
TRAPPC9-213ENST00000522504 PAWRQ96IZ0 340 aaKnown RBP18.84■□□□□ 0.61
TRAPPC9-213ENST00000522504 PNMA3Q9UL41 463 aa18.84■□□□□ 0.61
TRAPPC9-213ENST00000522504 DNAH12Q6ZR08 3092 aa18.84■□□□□ 0.61
TRAPPC9-213ENST00000522504 USP17L5A8MUK1 530 aa18.83■□□□□ 0.6
TRAPPC9-213ENST00000522504 EVI5O60447 810 aa18.83■□□□□ 0.6
TRAPPC9-213ENST00000522504 MAP4K4O95819 1239 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC9-213ENST00000522504 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.83■□□□□ 0.6
TRAPPC9-213ENST00000522504 SNRKQ9NRH2 765 aa18.83■□□□□ 0.6
TRAPPC9-213ENST00000522504 SOX1O00570 391 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC9-213ENST00000522504 GNAI2P04899 355 aa18.82■□□□□ 0.6
TRAPPC9-213ENST00000522504 GCLCP48506 637 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC9-213ENST00000522504 SH3D19Q5HYK7 790 aa18.82■□□□□ 0.6
TRAPPC9-213ENST00000522504 ADGRA1Q86SQ6 560 aa18.82■□□□□ 0.6
TRAPPC9-213ENST00000522504 DNAJC18Q9H819 358 aa18.82■□□□□ 0.6
TRAPPC9-213ENST00000522504 LRP2BPQ9P2M1 347 aa18.82■□□□□ 0.6
TRAPPC9-213ENST00000522504 STAP2Q9UGK3 403 aa18.82■□□□□ 0.6
TRAPPC9-213ENST00000522504 LOC285556D6RIA3 1793 aa18.82■□□□□ 0.6
TRAPPC9-213ENST00000522504 BCAR3O75815 825 aa18.81■□□□□ 0.6
TRAPPC9-213ENST00000522504 MNX1P50219 401 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC9-213ENST00000522504 MTMR2Q13614 643 aa18.81■□□□□ 0.6
TRAPPC9-213ENST00000522504 AATFQ9NY61 560 aaKnown RBP eCLIP18.81■□□□□ 0.6
TRAPPC9-213ENST00000522504 HERC5Q9UII4 1024 aaKnown RBP18.81■□□□□ 0.6
TRAPPC9-213ENST00000522504 SIPA1L1O43166 1804 aa18.8■□□□□ 0.6
TRAPPC9-213ENST00000522504 HMGCRP04035 888 aa18.8■□□□□ 0.6
TRAPPC9-213ENST00000522504 G3BP1Q13283 466 aaKnown RBP eCLIP18.8■□□□□ 0.6
TRAPPC9-213ENST00000522504 CLUAP1Q96AJ1 413 aa18.8■□□□□ 0.6
TRAPPC9-213ENST00000522504 WDR18Q9BV38 432 aa18.8■□□□□ 0.6
TRAPPC9-213ENST00000522504 TXNRD2Q9NNW7 524 aa18.8■□□□□ 0.6
TRAPPC9-213ENST00000522504 PI4KBQ9UBF8 816 aa18.8■□□□□ 0.6
TRAPPC9-213ENST00000522504 UQCRFS1P1P0C7P4 283 aa18.79■□□□□ 0.6
TRAPPC9-213ENST00000522504 POTEEQ6S8J3 1075 aa18.79■□□□□ 0.6
TRAPPC9-213ENST00000522504 ATF7IPQ6VMQ6 1270 aa18.79■□□□□ 0.6
TRAPPC9-213ENST00000522504 MAPKAPK5Q8IW41 473 aa18.79■□□□□ 0.6
TRAPPC9-213ENST00000522504 TGFBRAP1Q8WUH2 860 aa18.79■□□□□ 0.6
TRAPPC9-213ENST00000522504 TRIB2Q92519 343 aa18.79■□□□□ 0.6
TRAPPC9-213ENST00000522504 LRCH3Q96II8 777 aa18.79■□□□□ 0.6
TRAPPC9-213ENST00000522504 P2RX7Q99572 595 aaKnown RBP18.79■□□□□ 0.6
TRAPPC9-213ENST00000522504 DBNDD2Q9BQY9 259 aa18.79■□□□□ 0.6
TRAPPC9-213ENST00000522504 TBC1D2Q9BYX2 928 aa18.79■□□□□ 0.6
TRAPPC9-213ENST00000522504 MORF4L1Q9UBU8 362 aa18.79■□□□□ 0.6
TRAPPC9-213ENST00000522504 FLT1P17948 1338 aa18.78■□□□□ 0.6
TRAPPC9-213ENST00000522504 CYP2E1P05181 493 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC9-213ENST00000522504 BACE1P56817 501 aa18.78■□□□□ 0.6
TRAPPC9-213ENST00000522504 PPP4CP60510 307 aa18.78■□□□□ 0.6
TRAPPC9-213ENST00000522504 PABPC4Q13310 644 aaKnown RBP eCLIP18.78■□□□□ 0.6
TRAPPC9-213ENST00000522504 NAA16Q6N069 864 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC9-213ENST00000522504 NECAB2Q7Z6G3 386 aa18.78■□□□□ 0.6
TRAPPC9-213ENST00000522504 METTL16Q86W50 562 aaKnown RBP18.78■□□□□ 0.6
TRAPPC9-213ENST00000522504 FRAT1Q92837 279 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC9-213ENST00000522504 ATAD5Q96QE3 1844 aa18.78■□□□□ 0.6
TRAPPC9-213ENST00000522504 ALPK3Q96L96 1907 aa18.78■□□□□ 0.6
TRAPPC9-213ENST00000522504 GDF11O95390 407 aa18.77■□□□□ 0.6
TRAPPC9-213ENST00000522504 CAPN2P17655 700 aa18.77■□□□□ 0.6
TRAPPC9-213ENST00000522504 HOXA7P31268 230 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC9-213ENST00000522504 POLA2Q14181 598 aa18.77■□□□□ 0.6
TRAPPC9-213ENST00000522504 TNNI3KQ59H18 835 aa18.77■□□□□ 0.6
TRAPPC9-213ENST00000522504 DHX36Q9H2U1 1008 aaKnown RBP18.77■□□□□ 0.6
TRAPPC9-213ENST00000522504 AS3MTQ9HBK9 375 aa18.77■□□□□ 0.6
TRAPPC9-213ENST00000522504 PIH1D3Q9NQM4 214 aaKnown RBP18.77■□□□□ 0.6
TRAPPC9-213ENST00000522504 PALD1Q9ULE6 856 aa18.77■□□□□ 0.6
TRAPPC9-213ENST00000522504 FPGT-TNNI3KV9GXZ4 949 aa18.77■□□□□ 0.6
TRAPPC9-213ENST00000522504 PLXNB2O15031 1838 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms