RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 TRIM27P14373 513 aa24.67■■□□□ 1.54
HDAC2-207ENST00000520170 ARID4AP29374 1257 aaPredicted RBP24.67■■□□□ 1.54
HDAC2-207ENST00000520170 SPP2Q13103 211 aa24.67■■□□□ 1.54
HDAC2-207ENST00000520170 UBE2Q1Q7Z7E8 422 aa24.67■■□□□ 1.54
HDAC2-207ENST00000520170 HTATIP2Q9BUP3 242 aa24.67■■□□□ 1.54
HDAC2-207ENST00000520170 OSBPL5Q9H0X9 879 aaPredicted RBP24.67■■□□□ 1.54
HDAC2-207ENST00000520170 LRP2BPQ9P2M1 347 aa24.67■■□□□ 1.54
HDAC2-207ENST00000520170 MAP4K4O95819 1239 aaPredicted RBP24.66■■□□□ 1.54
HDAC2-207ENST00000520170 INHAP05111 366 aa24.66■■□□□ 1.54
HDAC2-207ENST00000520170 MCAMP43121 646 aa24.66■■□□□ 1.54
HDAC2-207ENST00000520170 TEX11Q8IYF3 940 aa24.66■■□□□ 1.54
HDAC2-207ENST00000520170 CLUAP1Q96AJ1 413 aa24.66■■□□□ 1.54
HDAC2-207ENST00000520170 PNMA3Q9UL41 463 aa24.66■■□□□ 1.54
HDAC2-207ENST00000520170 BCAR3O75815 825 aa24.65■■□□□ 1.54
HDAC2-207ENST00000520170 FARP2O94887 1054 aaPredicted RBP24.65■■□□□ 1.54
HDAC2-207ENST00000520170 SGPL1O95470 568 aa24.65■■□□□ 1.54
HDAC2-207ENST00000520170 ATF7IPQ6VMQ6 1270 aa24.65■■□□□ 1.54
HDAC2-207ENST00000520170 COA7Q96BR5 231 aa24.65■■□□□ 1.54
HDAC2-207ENST00000520170 UQCRFS1P1P0C7P4 283 aa24.64■■□□□ 1.54
HDAC2-207ENST00000520170 IRF5Q13568 498 aa24.64■■□□□ 1.54
HDAC2-207ENST00000520170 PROCA1Q8NCQ7 364 aaPredicted RBP24.64■■□□□ 1.54
HDAC2-207ENST00000520170 ZNF280CQ8ND82 737 aa24.64■■□□□ 1.54
HDAC2-207ENST00000520170 PXYLP1Q8TE99 480 aa24.64■■□□□ 1.54
HDAC2-207ENST00000520170 SH3RF3Q8TEJ3 882 aaPredicted RBP24.64■■□□□ 1.54
HDAC2-207ENST00000520170 NOL10Q9BSC4 688 aaKnown RBP24.64■■□□□ 1.54
HDAC2-207ENST00000520170 LOC285556D6RIA3 1793 aa24.64■■□□□ 1.53
HDAC2-207ENST00000520170 MYO5AQ9Y4I1 1855 aaKnown RBP24.64■■□□□ 1.53
HDAC2-207ENST00000520170 TFRCP02786 760 aaKnown RBP24.63■■□□□ 1.53
HDAC2-207ENST00000520170 CAP2P40123 477 aa24.63■■□□□ 1.53
HDAC2-207ENST00000520170 HMGCS2P54868 508 aa24.63■■□□□ 1.53
HDAC2-207ENST00000520170 RRP1BQ14684 758 aaKnown RBP24.63■■□□□ 1.53
HDAC2-207ENST00000520170 SNRKQ9NRH2 765 aa24.63■■□□□ 1.53
HDAC2-207ENST00000520170 COL2A1P02458 1487 aaPredicted RBP24.63■■□□□ 1.53
HDAC2-207ENST00000520170 CCER2I3L3R5 266 aa24.62■■□□□ 1.53
HDAC2-207ENST00000520170 FAM110CQ1W6H9 321 aa24.62■■□□□ 1.53
HDAC2-207ENST00000520170 DEFB118Q96PH6 123 aa24.62■■□□□ 1.53
HDAC2-207ENST00000520170 RBM27Q9P2N5 1060 aaKnown RBP24.62■■□□□ 1.53
HDAC2-207ENST00000520170 CDK5RAP2Q96SN8 1893 aa24.62■■□□□ 1.53
HDAC2-207ENST00000520170 RANBP2P49792 3224 aaKnown RBP24.61■■□□□ 1.53
HDAC2-207ENST00000520170 USP17L5A8MUK1 530 aa24.61■■□□□ 1.53
HDAC2-207ENST00000520170 TBC1D2Q9BYX2 928 aa24.61■■□□□ 1.53
HDAC2-207ENST00000520170 AATFQ9NY61 560 aaKnown RBP eCLIP24.61■■□□□ 1.53
HDAC2-207ENST00000520170 NR2E3Q9Y5X4 410 aa24.61■■□□□ 1.53
HDAC2-207ENST00000520170 GCLCP48506 637 aaPredicted RBP24.6■■□□□ 1.53
HDAC2-207ENST00000520170 PABPC4Q13310 644 aaKnown RBP eCLIP24.6■■□□□ 1.53
HDAC2-207ENST00000520170 TTC39AQ5SRH9 613 aa24.6■■□□□ 1.53
HDAC2-207ENST00000520170 NAA16Q6N069 864 aaPredicted RBP24.6■■□□□ 1.53
HDAC2-207ENST00000520170 PI4KBQ9UBF8 816 aa24.6■■□□□ 1.53
HDAC2-207ENST00000520170 HERC5Q9UII4 1024 aaKnown RBP24.6■■□□□ 1.53
HDAC2-207ENST00000520170 SIPA1L1O43166 1804 aa24.59■■□□□ 1.53
HDAC2-207ENST00000520170 BAG3O95817 575 aa24.59■■□□□ 1.53
HDAC2-207ENST00000520170 OS9Q13438 667 aaPredicted RBP24.59■■□□□ 1.53
HDAC2-207ENST00000520170 TMEM57Q8N5G2 664 aa24.59■■□□□ 1.53
HDAC2-207ENST00000520170 ASCC2Q9H1I8 757 aaPredicted RBP24.59■■□□□ 1.53
HDAC2-207ENST00000520170 AS3MTQ9HBK9 375 aa24.59■■□□□ 1.53
HDAC2-207ENST00000520170 SZT2Q5T011 3432 aa24.58■■□□□ 1.53
HDAC2-207ENST00000520170 CCDC158Q5M9N0 1113 aa24.58■■□□□ 1.53
HDAC2-207ENST00000520170 TGFBRAP1Q8WUH2 860 aa24.58■■□□□ 1.53
HDAC2-207ENST00000520170 DBNDD2Q9BQY9 259 aa24.58■■□□□ 1.53
HDAC2-207ENST00000520170 PAK6Q9NQU5 681 aaPredicted RBP24.58■■□□□ 1.53
HDAC2-207ENST00000520170 MAST2Q6P0Q8 1798 aa24.57■■□□□ 1.52
HDAC2-207ENST00000520170 FOCADQ5VW36 1801 aa24.57■■□□□ 1.52
HDAC2-207ENST00000520170 PLCG2P16885 1265 aa24.57■■□□□ 1.52
HDAC2-207ENST00000520170 TNNI3KQ59H18 835 aa24.57■■□□□ 1.52
HDAC2-207ENST00000520170 MAPKAPK5Q8IW41 473 aa24.57■■□□□ 1.52
HDAC2-207ENST00000520170 DHX36Q9H2U1 1008 aaKnown RBP24.57■■□□□ 1.52
HDAC2-207ENST00000520170 FPGT-TNNI3KV9GXZ4 949 aa24.57■■□□□ 1.52
HDAC2-207ENST00000520170 ZBTB7BO15156 539 aaPredicted RBP24.56■■□□□ 1.52
HDAC2-207ENST00000520170 EVI5O60447 810 aa24.56■■□□□ 1.52
HDAC2-207ENST00000520170 SH3D19Q5HYK7 790 aa24.56■■□□□ 1.52
HDAC2-207ENST00000520170 GPR108Q9NPR9 543 aa24.56■■□□□ 1.52
HDAC2-207ENST00000520170 CYP2E1P05181 493 aaPredicted RBP24.55■■□□□ 1.52
HDAC2-207ENST00000520170 PPP4CP60510 307 aa24.55■■□□□ 1.52
HDAC2-207ENST00000520170 MTMR2Q13614 643 aa24.55■■□□□ 1.52
HDAC2-207ENST00000520170 POLA2Q14181 598 aa24.55■■□□□ 1.52
HDAC2-207ENST00000520170 ZKSCAN2Q63HK3 967 aa24.55■■□□□ 1.52
HDAC2-207ENST00000520170 ADGRA1Q86SQ6 560 aa24.55■■□□□ 1.52
HDAC2-207ENST00000520170 CRACR2BQ8N4Y2 399 aaPredicted RBP24.55■■□□□ 1.52
HDAC2-207ENST00000520170 WDR18Q9BV38 432 aa24.55■■□□□ 1.52
HDAC2-207ENST00000520170 CRISPLD2Q9H0B8 497 aa24.55■■□□□ 1.52
HDAC2-207ENST00000520170 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.55■■□□□ 1.52
HDAC2-207ENST00000520170 ALPK3Q96L96 1907 aa24.55■■□□□ 1.52
HDAC2-207ENST00000520170 SURF6O75683 361 aaKnown RBP24.54■■□□□ 1.52
HDAC2-207ENST00000520170 ASNSP08243 561 aa24.54■■□□□ 1.52
HDAC2-207ENST00000520170 CAPN2P17655 700 aa24.54■■□□□ 1.52
HDAC2-207ENST00000520170 IRX3P78415 501 aaPredicted RBP24.54■■□□□ 1.52
HDAC2-207ENST00000520170 JAG1P78504 1218 aa24.54■■□□□ 1.52
HDAC2-207ENST00000520170 ATP8B2P98198 1209 aa24.54■■□□□ 1.52
HDAC2-207ENST00000520170 PAWRQ96IZ0 340 aaKnown RBP24.54■■□□□ 1.52
HDAC2-207ENST00000520170 TRIM34Q9BYJ4 488 aa24.54■■□□□ 1.52
HDAC2-207ENST00000520170 TMOD4Q9NZQ9 345 aa24.54■■□□□ 1.52
HDAC2-207ENST00000520170 GJD2Q9UKL4 321 aa24.54■■□□□ 1.52
HDAC2-207ENST00000520170 PALD1Q9ULE6 856 aa24.54■■□□□ 1.52
HDAC2-207ENST00000520170 PLXNB2O15031 1838 aa24.54■■□□□ 1.52
HDAC2-207ENST00000520170 HMGCRP04035 888 aa24.53■■□□□ 1.52
HDAC2-207ENST00000520170 BACE1P56817 501 aa24.53■■□□□ 1.52
HDAC2-207ENST00000520170 FOXP4Q8IVH2 680 aaPredicted RBP24.53■■□□□ 1.52
HDAC2-207ENST00000520170 SSH3Q8TE77 659 aa24.53■■□□□ 1.52
HDAC2-207ENST00000520170 C1orf115Q9H7X2 142 aa24.53■■□□□ 1.52
HDAC2-207ENST00000520170 SAP30BPQ9UHR5 308 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms