RNA–Protein interactions for RNA: ENST00000519815.5

TRPS1-210, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 3

Gene TRPS1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-210ENST00000519815 ARPP21Q9UBL0 812 aaPredicted RBP12.34□□□□□ -0.43
TRPS1-210ENST00000519815 MKRN1Q9UHC7 482 aaKnown RBP12.34□□□□□ -0.43
TRPS1-210ENST00000519815 HDAC9Q9UKV0 1011 aa12.34□□□□□ -0.43
TRPS1-210ENST00000519815 LIMCH1Q9UPQ0 1083 aa12.34□□□□□ -0.43
TRPS1-210ENST00000519815 CHD4Q14839 1912 aa12.34□□□□□ -0.43
TRPS1-210ENST00000519815 BRCA1P38398 1863 aaKnown RBP12.34□□□□□ -0.43
TRPS1-210ENST00000519815 CCDC88AQ3V6T2 1871 aa12.34□□□□□ -0.43
TRPS1-210ENST00000519815 HSP90AA1P07900 732 aaKnown RBP12.33□□□□□ -0.44
TRPS1-210ENST00000519815 SLC3A2P08195 630 aaKnown RBP12.33□□□□□ -0.44
TRPS1-210ENST00000519815 PCP11498 1178 aaKnown RBP12.33□□□□□ -0.44
TRPS1-210ENST00000519815 MCM5P33992 734 aa12.33□□□□□ -0.44
TRPS1-210ENST00000519815 FGD1P98174 961 aa12.33□□□□□ -0.44
TRPS1-210ENST00000519815 OGFOD1Q8N543 542 aa12.33□□□□□ -0.44
TRPS1-210ENST00000519815 TMX3Q96JJ7 454 aa12.33□□□□□ -0.44
TRPS1-210ENST00000519815 KRT23Q9C075 422 aa12.33□□□□□ -0.44
TRPS1-210ENST00000519815 WDR19Q8NEZ3 1342 aa12.33□□□□□ -0.44
TRPS1-210ENST00000519815 POTEB2H3BUK9 544 aa12.32□□□□□ -0.44
TRPS1-210ENST00000519815 FZD9O00144 591 aa12.32□□□□□ -0.44
TRPS1-210ENST00000519815 POLR3DP05423 398 aaPredicted RBP12.32□□□□□ -0.44
TRPS1-210ENST00000519815 MMP14P50281 582 aa12.32□□□□□ -0.44
TRPS1-210ENST00000519815 EIF6P56537 245 aaKnown RBP12.32□□□□□ -0.44
TRPS1-210ENST00000519815 COL9A3Q14050 684 aaPredicted RBP12.32□□□□□ -0.44
TRPS1-210ENST00000519815 IER5LQ5T953 404 aa12.32□□□□□ -0.44
TRPS1-210ENST00000519815 C12orf60Q5U649 245 aa12.32□□□□□ -0.44
TRPS1-210ENST00000519815 CDC42EP5Q6NZY7 148 aa12.32□□□□□ -0.44
TRPS1-210ENST00000519815 NOL8Q76FK4 1167 aaKnown RBP12.32□□□□□ -0.44
TRPS1-210ENST00000519815 MAPKAPK5Q8IW41 473 aa12.32□□□□□ -0.44
TRPS1-210ENST00000519815 MB21D2Q8IYB1 491 aaPredicted RBP12.32□□□□□ -0.44
TRPS1-210ENST00000519815 FBXL16Q8N461 479 aa12.32□□□□□ -0.44
TRPS1-210ENST00000519815 TCEANC2Q96MN5 208 aa12.32□□□□□ -0.44
TRPS1-210ENST00000519815 SH2B1Q9NRF2 756 aaPredicted RBP12.32□□□□□ -0.44
TRPS1-210ENST00000519815 COL4A5P29400 1685 aa12.32□□□□□ -0.44
TRPS1-210ENST00000519815 CYP2D7A0A087X1C5 515 aa12.31□□□□□ -0.44
TRPS1-210ENST00000519815 PRC1O43663 620 aa12.31□□□□□ -0.44
TRPS1-210ENST00000519815 FGRP09769 529 aa12.31□□□□□ -0.44
TRPS1-210ENST00000519815 USP17L8P0C7I0 530 aa12.31□□□□□ -0.44
TRPS1-210ENST00000519815 RPS12P25398 132 aaKnown RBP12.31□□□□□ -0.44
TRPS1-210ENST00000519815 TOB2Q14106 344 aaPredicted RBP12.31□□□□□ -0.44
TRPS1-210ENST00000519815 E2F4Q16254 413 aa12.31□□□□□ -0.44
TRPS1-210ENST00000519815 CFAP100Q494V2 611 aa12.31□□□□□ -0.44
TRPS1-210ENST00000519815 Q6ZUG5 572 aa12.31□□□□□ -0.44
TRPS1-210ENST00000519815 TOMM22Q9NS69 142 aa12.31□□□□□ -0.44
TRPS1-210ENST00000519815 FER1L6Q2WGJ9 1857 aa12.31□□□□□ -0.44
TRPS1-210ENST00000519815 B4E1Z4 1266 aa12.3□□□□□ -0.44
TRPS1-210ENST00000519815 WDHD1O75717 1129 aaPredicted RBP12.3□□□□□ -0.44
TRPS1-210ENST00000519815 CYP2D6P10635 497 aa12.3□□□□□ -0.44
TRPS1-210ENST00000519815 LMNB1P20700 586 aa12.3□□□□□ -0.44
TRPS1-210ENST00000519815 NT5C2P49902 561 aa12.3□□□□□ -0.44
TRPS1-210ENST00000519815 PRELPP51888 382 aa12.3□□□□□ -0.44
TRPS1-210ENST00000519815 PDE4BQ07343 736 aa12.3□□□□□ -0.44
TRPS1-210ENST00000519815 CUL4AQ13619 759 aa12.3□□□□□ -0.44
TRPS1-210ENST00000519815 DLGAP5Q15398 846 aa12.3□□□□□ -0.44
TRPS1-210ENST00000519815 TMEM132AQ24JP5 1023 aa12.3□□□□□ -0.44
TRPS1-210ENST00000519815 CHST3Q7LGC8 479 aa12.3□□□□□ -0.44
TRPS1-210ENST00000519815 ESR2Q92731 530 aa12.3□□□□□ -0.44
TRPS1-210ENST00000519815 AGXT2Q9BYV1 514 aa12.3□□□□□ -0.44
TRPS1-210ENST00000519815 INCENPQ9NQS7 918 aa12.3□□□□□ -0.44
TRPS1-210ENST00000519815 SAP30BPQ9UHR5 308 aaKnown RBP12.3□□□□□ -0.44
TRPS1-210ENST00000519815 TACC3Q9Y6A5 838 aa12.3□□□□□ -0.44
TRPS1-210ENST00000519815 SCN9AQ15858 1988 aa12.3□□□□□ -0.44
TRPS1-210ENST00000519815 FLT1P17948 1338 aa12.3□□□□□ -0.44
TRPS1-210ENST00000519815 NEDD4P46934 1319 aa12.3□□□□□ -0.44
TRPS1-210ENST00000519815 MYH2Q9UKX2 1941 aa12.29□□□□□ -0.44
TRPS1-210ENST00000519815 POTEFA5A3E0 1075 aa12.29□□□□□ -0.44
TRPS1-210ENST00000519815 ORC4O43929 436 aa12.29□□□□□ -0.44
TRPS1-210ENST00000519815 KDM4AO75164 1064 aa12.29□□□□□ -0.44
TRPS1-210ENST00000519815 ANTXR2P58335 489 aa12.29□□□□□ -0.44
TRPS1-210ENST00000519815 PICALMQ13492 652 aa12.29□□□□□ -0.44
TRPS1-210ENST00000519815 RRP12Q5JTH9 1297 aaKnown RBP12.29□□□□□ -0.44
TRPS1-210ENST00000519815 TTC6Q86TZ1 520 aa12.29□□□□□ -0.44
TRPS1-210ENST00000519815 STK11IPQ8N1F8 1099 aa12.29□□□□□ -0.44
TRPS1-210ENST00000519815 BRF1Q92994 677 aa12.29□□□□□ -0.44
TRPS1-210ENST00000519815 INTS4Q96HW7 963 aaKnown RBP12.29□□□□□ -0.44
TRPS1-210ENST00000519815 TMEM87BQ96K49 555 aa12.29□□□□□ -0.44
TRPS1-210ENST00000519815 LARP6Q9BRS8 491 aaKnown RBP12.29□□□□□ -0.44
TRPS1-210ENST00000519815 MTA3Q9BTC8 594 aa12.29□□□□□ -0.44
TRPS1-210ENST00000519815 IDI2Q9BXS1 227 aa12.29□□□□□ -0.44
TRPS1-210ENST00000519815 LRRC2Q9BYS8 371 aa12.29□□□□□ -0.44
TRPS1-210ENST00000519815 ZNF287Q9HBT7 754 aa12.29□□□□□ -0.44
TRPS1-210ENST00000519815 CWC22Q9HCG8 908 aaKnown RBP12.29□□□□□ -0.44
TRPS1-210ENST00000519815 ZSWIM5Q9P217 1185 aa12.29□□□□□ -0.44
TRPS1-210ENST00000519815 TPCN1Q9ULQ1 816 aa12.29□□□□□ -0.44
TRPS1-210ENST00000519815 ARFGEF1Q9Y6D6 1849 aa12.29□□□□□ -0.44
TRPS1-210ENST00000519815 SMIM22K7EJ46 135 aa12.28□□□□□ -0.44
TRPS1-210ENST00000519815 YBX3P16989 372 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRPS1-210ENST00000519815 SART3Q15020 963 aaKnown RBP12.28□□□□□ -0.44
TRPS1-210ENST00000519815 CYB5R4Q7L1T6 521 aa12.28□□□□□ -0.44
TRPS1-210ENST00000519815 MTMR14Q8NCE2 650 aa12.28□□□□□ -0.44
TRPS1-210ENST00000519815 DPF2Q92785 391 aa12.28□□□□□ -0.44
TRPS1-210ENST00000519815 PRMT6Q96LA8 375 aaPredicted RBP12.28□□□□□ -0.44
TRPS1-210ENST00000519815 TDRD3Q9H7E2 651 aaKnown RBP12.28□□□□□ -0.44
TRPS1-210ENST00000519815 TMOD2Q9NZR1 351 aa12.28□□□□□ -0.44
TRPS1-210ENST00000519815 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRPS1-210ENST00000519815 PCDHAC2Q9Y5I4 1007 aa12.28□□□□□ -0.44
TRPS1-210ENST00000519815 ERICH2A1L162 156 aa12.27□□□□□ -0.45
TRPS1-210ENST00000519815 SOCS7O14512 581 aa12.27□□□□□ -0.45
TRPS1-210ENST00000519815 IFIT3O14879 490 aaKnown RBP12.27□□□□□ -0.45
TRPS1-210ENST00000519815 RANBP6O60518 1105 aaKnown RBP12.27□□□□□ -0.45
TRPS1-210ENST00000519815 PLCD1P51178 756 aa12.27□□□□□ -0.45
TRPS1-210ENST00000519815 EVCP57679 992 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms