RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 ZSCAN22P10073 491 aaPredicted RBP17.03■□□□□ 0.32
CLN8-204ENST00000519254 RPS12P25398 132 aaKnown RBP17.03■□□□□ 0.32
CLN8-204ENST00000519254 EVCP57679 992 aa17.03■□□□□ 0.32
CLN8-204ENST00000519254 EVX2Q03828 476 aa17.03■□□□□ 0.32
CLN8-204ENST00000519254 PRMT6Q96LA8 375 aaPredicted RBP17.03■□□□□ 0.32
CLN8-204ENST00000519254 TDRD3Q9H7E2 651 aaKnown RBP17.03■□□□□ 0.32
CLN8-204ENST00000519254 GPHNQ9NQX3 736 aaPredicted RBP17.03■□□□□ 0.32
CLN8-204ENST00000519254 ARPP21Q9UBL0 812 aaPredicted RBP17.03■□□□□ 0.32
CLN8-204ENST00000519254 ECM29Q5VYK3 1845 aa17.03■□□□□ 0.32
CLN8-204ENST00000519254 WDHD1O75717 1129 aaPredicted RBP17.02■□□□□ 0.32
CLN8-204ENST00000519254 SCRN1Q12765 414 aa17.02■□□□□ 0.32
CLN8-204ENST00000519254 RALYLQ86SE5 291 aaKnown RBP17.02■□□□□ 0.32
CLN8-204ENST00000519254 MICALL2Q8IY33 904 aa17.02■□□□□ 0.32
CLN8-204ENST00000519254 INCENPQ9NQS7 918 aa17.02■□□□□ 0.32
CLN8-204ENST00000519254 TOMM22Q9NS69 142 aa17.02■□□□□ 0.32
CLN8-204ENST00000519254 LMBRD1Q9NUN5 540 aa17.02■□□□□ 0.32
CLN8-204ENST00000519254 MKRN1Q9UHC7 482 aaKnown RBP17.02■□□□□ 0.32
CLN8-204ENST00000519254 TACC3Q9Y6A5 838 aa17.02■□□□□ 0.32
CLN8-204ENST00000519254 LAMB1P07942 1786 aa17.02■□□□□ 0.32
CLN8-204ENST00000519254 FOCADQ5VW36 1801 aa17.02■□□□□ 0.31
CLN8-204ENST00000519254 SPDYE2BA6NHP3 402 aa17.02■□□□□ 0.31
CLN8-204ENST00000519254 GRIN3BO60391 1043 aa17.02■□□□□ 0.31
CLN8-204ENST00000519254 POLR3DP05423 398 aaPredicted RBP17.02■□□□□ 0.31
CLN8-204ENST00000519254 SPDYE6P0CI01 402 aa17.02■□□□□ 0.31
CLN8-204ENST00000519254 NFIAQ12857 509 aa17.02■□□□□ 0.31
CLN8-204ENST00000519254 RBM26Q5T8P6 1007 aaKnown RBP17.02■□□□□ 0.31
CLN8-204ENST00000519254 AMOTL1Q8IY63 956 aa17.02■□□□□ 0.31
CLN8-204ENST00000519254 ZNF274Q96GC6 653 aaPredicted RBP17.02■□□□□ 0.31
CLN8-204ENST00000519254 DDX4Q9NQI0 724 aaKnown RBP17.02■□□□□ 0.31
CLN8-204ENST00000519254 MTMR6Q9Y217 621 aa17.02■□□□□ 0.31
CLN8-204ENST00000519254 UTRNP46939 3433 aa17.01■□□□□ 0.31
CLN8-204ENST00000519254 NEDD4P46934 1319 aa17.01■□□□□ 0.31
CLN8-204ENST00000519254 CLRN2A0PK11 232 aa17.01■□□□□ 0.31
CLN8-204ENST00000519254 PDIA3P30101 505 aaKnown RBP17.01■□□□□ 0.31
CLN8-204ENST00000519254 SKOR2Q2VWA4 1001 aaPredicted RBP17.01■□□□□ 0.31
CLN8-204ENST00000519254 RRP12Q5JTH9 1297 aaKnown RBP17.01■□□□□ 0.31
CLN8-204ENST00000519254 MYOZ2Q9NPC6 264 aa17.01■□□□□ 0.31
CLN8-204ENST00000519254 CNOT7Q9UIV1 285 aaKnown RBP17.01■□□□□ 0.31
CLN8-204ENST00000519254 JAK2O60674 1132 aa17■□□□□ 0.31
CLN8-204ENST00000519254 TCP10Q12799 353 aa17■□□□□ 0.31
CLN8-204ENST00000519254 TRDNQ13061 729 aa17■□□□□ 0.31
CLN8-204ENST00000519254 AKNAD1Q5T1N1 836 aa17■□□□□ 0.31
CLN8-204ENST00000519254 MFSD6Q6ZSS7 791 aa17■□□□□ 0.31
CLN8-204ENST00000519254 CYB5R4Q7L1T6 521 aa17■□□□□ 0.31
CLN8-204ENST00000519254 GPC2Q8N158 579 aa17■□□□□ 0.31
CLN8-204ENST00000519254 DDX60LQ5H9U9 1706 aaKnown RBP17■□□□□ 0.31
CLN8-204ENST00000519254 F13A1P00488 732 aa17■□□□□ 0.31
CLN8-204ENST00000519254 SBK1Q52WX2 424 aa17■□□□□ 0.31
CLN8-204ENST00000519254 LARP1BQ659C4 914 aaKnown RBP17■□□□□ 0.31
CLN8-204ENST00000519254 DPF2Q92785 391 aa17■□□□□ 0.31
CLN8-204ENST00000519254 LLPHQ9BRT6 129 aaKnown RBP17■□□□□ 0.31
CLN8-204ENST00000519254 TMOD2Q9NZR1 351 aa17■□□□□ 0.31
CLN8-204ENST00000519254 BRPF3Q9ULD4 1205 aa17■□□□□ 0.31
CLN8-204ENST00000519254 MYH1P12882 1939 aa16.99■□□□□ 0.31
CLN8-204ENST00000519254 B4E1Z4 1266 aa16.99■□□□□ 0.31
CLN8-204ENST00000519254 DDNO94850 711 aaPredicted RBP16.99■□□□□ 0.31
CLN8-204ENST00000519254 CTDNEP1O95476 244 aa16.99■□□□□ 0.31
CLN8-204ENST00000519254 EGFRP00533 1210 aa16.99■□□□□ 0.31
CLN8-204ENST00000519254 ZNF280AP59817 542 aaPredicted RBP16.99■□□□□ 0.31
CLN8-204ENST00000519254 TBC1D10BQ4KMP7 808 aaPredicted RBP16.99■□□□□ 0.31
CLN8-204ENST00000519254 C12orf60Q5U649 245 aa16.99■□□□□ 0.31
CLN8-204ENST00000519254 SAMD7Q7Z3H4 446 aa16.99■□□□□ 0.31
CLN8-204ENST00000519254 SMARCC2Q8TAQ2 1214 aa16.99■□□□□ 0.31
CLN8-204ENST00000519254 STAG1Q8WVM7 1258 aa16.99■□□□□ 0.31
CLN8-204ENST00000519254 OSBPL5Q9H0X9 879 aaPredicted RBP16.99■□□□□ 0.31
CLN8-204ENST00000519254 ANAPC4Q9UJX5 808 aa16.99■□□□□ 0.31
CLN8-204ENST00000519254 PRPF40AO75400 957 aaKnown RBP16.98■□□□□ 0.31
CLN8-204ENST00000519254 PRDM1O75626 825 aa16.98■□□□□ 0.31
CLN8-204ENST00000519254 SLC3A2P08195 630 aaKnown RBP16.98■□□□□ 0.31
CLN8-204ENST00000519254 PDIA4P13667 645 aaKnown RBP16.98■□□□□ 0.31
CLN8-204ENST00000519254 PDCP20941 246 aa16.98■□□□□ 0.31
CLN8-204ENST00000519254 PLCD1P51178 756 aa16.98■□□□□ 0.31
CLN8-204ENST00000519254 CCT2P78371 535 aaKnown RBP16.98■□□□□ 0.31
CLN8-204ENST00000519254 NBPF9Q3BBW0 867 aa16.98■□□□□ 0.31
CLN8-204ENST00000519254 NSUN7Q8NE18 718 aaKnown RBP16.98■□□□□ 0.31
CLN8-204ENST00000519254 RNF41Q9H4P4 317 aaPredicted RBP16.98■□□□□ 0.31
CLN8-204ENST00000519254 VEZTQ9HBM0 779 aa16.98■□□□□ 0.31
CLN8-204ENST00000519254 NCOA5Q9HCD5 579 aaKnown RBP16.98■□□□□ 0.31
CLN8-204ENST00000519254 ZNF70Q9UC06 446 aaPredicted RBP16.98■□□□□ 0.31
CLN8-204ENST00000519254 TCP10L2B9ZVM9 353 aa16.97■□□□□ 0.31
CLN8-204ENST00000519254 WNT10BO00744 389 aa16.97■□□□□ 0.31
CLN8-204ENST00000519254 MYO1BO43795 1136 aa16.97■□□□□ 0.31
CLN8-204ENST00000519254 ZFPM1Q8IX07 1006 aa16.97■□□□□ 0.31
CLN8-204ENST00000519254 MTMR14Q8NCE2 650 aa16.97■□□□□ 0.31
CLN8-204ENST00000519254 DYNLL2Q96FJ2 89 aa16.97■□□□□ 0.31
CLN8-204ENST00000519254 IDI2Q9BXS1 227 aa16.97■□□□□ 0.31
CLN8-204ENST00000519254 GZF1Q9H116 711 aaPredicted RBP16.97■□□□□ 0.31
CLN8-204ENST00000519254 FAM198AQ9UFP1 575 aa16.97■□□□□ 0.31
CLN8-204ENST00000519254 HPS5Q9UPZ3 1129 aa16.97■□□□□ 0.31
CLN8-204ENST00000519254 VPS37CA5D8V6 355 aaPredicted RBP16.97■□□□□ 0.31
CLN8-204ENST00000519254 H7C1D1 291 aa16.97■□□□□ 0.31
CLN8-204ENST00000519254 KDM4AO75164 1064 aa16.97■□□□□ 0.31
CLN8-204ENST00000519254 KIF4BQ2VIQ3 1234 aa16.97■□□□□ 0.31
CLN8-204ENST00000519254 FOXD4L6Q3SYB3 417 aaPredicted RBP16.97■□□□□ 0.31
CLN8-204ENST00000519254 FOXD4L3Q6VB84 417 aaPredicted RBP16.97■□□□□ 0.31
CLN8-204ENST00000519254 ZSCAN29Q8IWY8 852 aaPredicted RBP16.97■□□□□ 0.31
CLN8-204ENST00000519254 KRT23Q9C075 422 aa16.97■□□□□ 0.31
CLN8-204ENST00000519254 CNNM2Q9H8M5 875 aa16.97■□□□□ 0.31
CLN8-204ENST00000519254 GPRC5DQ9NZD1 345 aa16.97■□□□□ 0.31
CLN8-204ENST00000519254 NAP1L2Q9ULW6 460 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms