RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 SOX1O00570 391 aaPredicted RBP10.82□□□□□ -0.68
TRIM35-202ENST00000519219 ZBTB7BO15156 539 aaPredicted RBP10.82□□□□□ -0.68
TRIM35-202ENST00000519219 MCAMP43121 646 aa10.82□□□□□ -0.68
TRIM35-202ENST00000519219 SPP2Q13103 211 aa10.82□□□□□ -0.68
TRIM35-202ENST00000519219 NKX2-3Q8TAU0 364 aa10.82□□□□□ -0.68
TRIM35-202ENST00000519219 NSUN4Q96CB9 384 aaKnown RBP10.82□□□□□ -0.68
TRIM35-202ENST00000519219 NEUROD6Q96NK8 337 aa10.82□□□□□ -0.68
TRIM35-202ENST00000519219 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.82□□□□□ -0.68
TRIM35-202ENST00000519219 TBC1D12O60347 775 aa10.81□□□□□ -0.68
TRIM35-202ENST00000519219 HMGCS2P54868 508 aa10.81□□□□□ -0.68
TRIM35-202ENST00000519219 MTX1Q13505 466 aa10.81□□□□□ -0.68
TRIM35-202ENST00000519219 IRF5Q13568 498 aa10.81□□□□□ -0.68
TRIM35-202ENST00000519219 MVPQ14764 893 aaKnown RBP10.81□□□□□ -0.68
TRIM35-202ENST00000519219 SPTY2D1Q68D10 685 aaPredicted RBP10.81□□□□□ -0.68
TRIM35-202ENST00000519219 SPATA5Q8NB90 893 aa10.81□□□□□ -0.68
TRIM35-202ENST00000519219 SH3RF3Q8TEJ3 882 aaPredicted RBP10.81□□□□□ -0.68
TRIM35-202ENST00000519219 HTATIP2Q9BUP3 242 aa10.81□□□□□ -0.68
TRIM35-202ENST00000519219 OSBPL5Q9H0X9 879 aaPredicted RBP10.81□□□□□ -0.68
TRIM35-202ENST00000519219 PAK6Q9NQU5 681 aaPredicted RBP10.81□□□□□ -0.68
TRIM35-202ENST00000519219 SNRKQ9NRH2 765 aa10.81□□□□□ -0.68
TRIM35-202ENST00000519219 MYH1P12882 1939 aa10.81□□□□□ -0.68
TRIM35-202ENST00000519219 COL2A1P02458 1487 aaPredicted RBP10.81□□□□□ -0.68
TRIM35-202ENST00000519219 FRMPD3Q5JV73 1810 aa10.8□□□□□ -0.68
TRIM35-202ENST00000519219 TFRCP02786 760 aaKnown RBP10.8□□□□□ -0.68
TRIM35-202ENST00000519219 ARID4AP29374 1257 aaPredicted RBP10.8□□□□□ -0.68
TRIM35-202ENST00000519219 CAP2P40123 477 aa10.8□□□□□ -0.68
TRIM35-202ENST00000519219 FAM110CQ1W6H9 321 aa10.8□□□□□ -0.68
TRIM35-202ENST00000519219 ADGRA1Q86SQ6 560 aa10.8□□□□□ -0.68
TRIM35-202ENST00000519219 SLF2Q8IX21 1173 aa10.8□□□□□ -0.68
TRIM35-202ENST00000519219 PXYLP1Q8TE99 480 aa10.8□□□□□ -0.68
TRIM35-202ENST00000519219 PAWRQ96IZ0 340 aaKnown RBP10.8□□□□□ -0.68
TRIM35-202ENST00000519219 CRISPLD2Q9H0B8 497 aa10.8□□□□□ -0.68
TRIM35-202ENST00000519219 ASCC2Q9H1I8 757 aaPredicted RBP10.8□□□□□ -0.68
TRIM35-202ENST00000519219 DNAJC18Q9H819 358 aa10.8□□□□□ -0.68
TRIM35-202ENST00000519219 RAI14Q9P0K7 980 aa10.8□□□□□ -0.68
TRIM35-202ENST00000519219 NPM3O75607 178 aaKnown RBP10.79□□□□□ -0.68
TRIM35-202ENST00000519219 BCAR3O75815 825 aa10.79□□□□□ -0.68
TRIM35-202ENST00000519219 GNAI3P08754 354 aa10.79□□□□□ -0.68
TRIM35-202ENST00000519219 CT47B1P0C2W7 299 aaPredicted RBP10.79□□□□□ -0.68
TRIM35-202ENST00000519219 TRIM27P14373 513 aa10.79□□□□□ -0.68
TRIM35-202ENST00000519219 MNX1P50219 401 aaPredicted RBP10.79□□□□□ -0.68
TRIM35-202ENST00000519219 POTEEQ6S8J3 1075 aa10.79□□□□□ -0.68
TRIM35-202ENST00000519219 TEX11Q8IYF3 940 aa10.79□□□□□ -0.68
TRIM35-202ENST00000519219 PROCA1Q8NCQ7 364 aaPredicted RBP10.79□□□□□ -0.68
TRIM35-202ENST00000519219 ZNF280CQ8ND82 737 aa10.79□□□□□ -0.68
TRIM35-202ENST00000519219 CLUAP1Q96AJ1 413 aa10.79□□□□□ -0.68
TRIM35-202ENST00000519219 LRCH3Q96II8 777 aa10.79□□□□□ -0.68
TRIM35-202ENST00000519219 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.79□□□□□ -0.68
TRIM35-202ENST00000519219 STAP2Q9UGK3 403 aa10.79□□□□□ -0.68
TRIM35-202ENST00000519219 GJD2Q9UKL4 321 aa10.79□□□□□ -0.68
TRIM35-202ENST00000519219 AKAP2Q9Y2D5 859 aa10.79□□□□□ -0.68
TRIM35-202ENST00000519219 LAMA3Q16787 3333 aa10.78□□□□□ -0.68
TRIM35-202ENST00000519219 EVI5O60447 810 aa10.78□□□□□ -0.68
TRIM35-202ENST00000519219 MTMR2Q13614 643 aa10.78□□□□□ -0.68
TRIM35-202ENST00000519219 GORABQ5T7V8 394 aa10.78□□□□□ -0.68
TRIM35-202ENST00000519219 MAPKAPK5Q8IW41 473 aa10.78□□□□□ -0.68
TRIM35-202ENST00000519219 TRIB2Q92519 343 aa10.78□□□□□ -0.68
TRIM35-202ENST00000519219 COA7Q96BR5 231 aa10.78□□□□□ -0.68
TRIM35-202ENST00000519219 DBNDD2Q9BQY9 259 aa10.78□□□□□ -0.68
TRIM35-202ENST00000519219 TXNRD2Q9NNW7 524 aa10.78□□□□□ -0.68
TRIM35-202ENST00000519219 AATFQ9NY61 560 aaKnown RBP eCLIP10.78□□□□□ -0.68
TRIM35-202ENST00000519219 ZMYND8Q9ULU4 1186 aaPredicted RBP10.78□□□□□ -0.68
TRIM35-202ENST00000519219 COL6A3P12111 3177 aa10.78□□□□□ -0.68
TRIM35-202ENST00000519219 USP17L5A8MUK1 530 aa10.77□□□□□ -0.69
TRIM35-202ENST00000519219 GDF11O95390 407 aa10.77□□□□□ -0.69
TRIM35-202ENST00000519219 GSTO1P78417 241 aa10.77□□□□□ -0.69
TRIM35-202ENST00000519219 SH3D19Q5HYK7 790 aa10.77□□□□□ -0.69
TRIM35-202ENST00000519219 C7orf61Q8IZ16 206 aa10.77□□□□□ -0.69
TRIM35-202ENST00000519219 TGFBRAP1Q8WUH2 860 aa10.77□□□□□ -0.69
TRIM35-202ENST00000519219 ARHGAP45Q92619 1136 aa10.77□□□□□ -0.69
TRIM35-202ENST00000519219 FRAT1Q92837 279 aaPredicted RBP10.77□□□□□ -0.69
TRIM35-202ENST00000519219 P2RX7Q99572 595 aaKnown RBP10.77□□□□□ -0.69
TRIM35-202ENST00000519219 PIH1D3Q9NQM4 214 aaKnown RBP10.77□□□□□ -0.69
TRIM35-202ENST00000519219 TLR7Q9NYK1 1049 aaKnown RBP10.77□□□□□ -0.69
TRIM35-202ENST00000519219 LRP2BPQ9P2M1 347 aa10.77□□□□□ -0.69
TRIM35-202ENST00000519219 SAP30BPQ9UHR5 308 aaKnown RBP10.77□□□□□ -0.69
TRIM35-202ENST00000519219 PNMA3Q9UL41 463 aa10.77□□□□□ -0.69
TRIM35-202ENST00000519219 HDAC5Q9UQL6 1122 aa10.77□□□□□ -0.69
TRIM35-202ENST00000519219 NR2E3Q9Y5X4 410 aa10.77□□□□□ -0.69
TRIM35-202ENST00000519219 HMGCRP04035 888 aa10.76□□□□□ -0.69
TRIM35-202ENST00000519219 GNAI2P04899 355 aa10.76□□□□□ -0.69
TRIM35-202ENST00000519219 CYP2E1P05181 493 aaPredicted RBP10.76□□□□□ -0.69
TRIM35-202ENST00000519219 LDHCP07864 332 aa10.76□□□□□ -0.69
TRIM35-202ENST00000519219 GCLCP48506 637 aaPredicted RBP10.76□□□□□ -0.69
TRIM35-202ENST00000519219 DYNLL1P63167 89 aaKnown RBP10.76□□□□□ -0.69
TRIM35-202ENST00000519219 TMEM57Q8N5G2 664 aa10.76□□□□□ -0.69
TRIM35-202ENST00000519219 C1orf115Q9H7X2 142 aa10.76□□□□□ -0.69
TRIM35-202ENST00000519219 MORF4L1Q9UBU8 362 aa10.76□□□□□ -0.69
TRIM35-202ENST00000519219 PALD1Q9ULE6 856 aa10.76□□□□□ -0.69
TRIM35-202ENST00000519219 FLT1P17948 1338 aa10.76□□□□□ -0.69
TRIM35-202ENST00000519219 SYN1P17600 705 aa10.75□□□□□ -0.69
TRIM35-202ENST00000519219 CYP2B6P20813 491 aa10.75□□□□□ -0.69
TRIM35-202ENST00000519219 ZAP70P43403 619 aa10.75□□□□□ -0.69
TRIM35-202ENST00000519219 G3BP1Q13283 466 aaKnown RBP eCLIP10.75□□□□□ -0.69
TRIM35-202ENST00000519219 POLA2Q14181 598 aa10.75□□□□□ -0.69
TRIM35-202ENST00000519219 CCL14Q16627 93 aa10.75□□□□□ -0.69
TRIM35-202ENST00000519219 Q3C1V9 767 aa10.75□□□□□ -0.69
TRIM35-202ENST00000519219 TNNI3KQ59H18 835 aa10.75□□□□□ -0.69
TRIM35-202ENST00000519219 NAA16Q6N069 864 aaPredicted RBP10.75□□□□□ -0.69
TRIM35-202ENST00000519219 ATF7IPQ6VMQ6 1270 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms