RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 PARD3BQ8TEW8 1205 aa15.32■□□□□ 0.04
PABPC1-208ENST00000519004 AENQ8WTP8 325 aaKnown RBP15.32■□□□□ 0.04
PABPC1-208ENST00000519004 NFE2L3Q9Y4A8 694 aa15.32■□□□□ 0.04
PABPC1-208ENST00000519004 EDC4Q6P2E9 1401 aaKnown RBP15.32■□□□□ 0.04
PABPC1-208ENST00000519004 FOXO3O43524 673 aa15.32■□□□□ 0.04
PABPC1-208ENST00000519004 EPB41P11171 864 aaKnown RBP15.32■□□□□ 0.04
PABPC1-208ENST00000519004 FDPSP14324 419 aaKnown RBP15.32■□□□□ 0.04
PABPC1-208ENST00000519004 E2F5Q15329 346 aa15.32■□□□□ 0.04
PABPC1-208ENST00000519004 MYSM1Q5VVJ2 828 aa15.32■□□□□ 0.04
PABPC1-208ENST00000519004 OTUD7BQ6GQQ9 843 aa15.32■□□□□ 0.04
PABPC1-208ENST00000519004 AACSQ86V21 672 aa15.32■□□□□ 0.04
PABPC1-208ENST00000519004 CCDC50Q8IVM0 306 aa15.32■□□□□ 0.04
PABPC1-208ENST00000519004 FUKQ8N0W3 1084 aa15.32■□□□□ 0.04
PABPC1-208ENST00000519004 HSP90AB2PQ58FF8 381 aa15.31■□□□□ 0.04
PABPC1-208ENST00000519004 ZNF473Q8WTR7 871 aaKnown RBP15.31■□□□□ 0.04
PABPC1-208ENST00000519004 ARL8AQ96BM9 186 aa15.31■□□□□ 0.04
PABPC1-208ENST00000519004 A0A1B0GTH6 734 aa15.31■□□□□ 0.04
PABPC1-208ENST00000519004 CYP21A2P08686 494 aa15.31■□□□□ 0.04
PABPC1-208ENST00000519004 FECHP22830 423 aa15.31■□□□□ 0.04
PABPC1-208ENST00000519004 DRP2Q13474 957 aa15.31■□□□□ 0.04
PABPC1-208ENST00000519004 TTLL7Q6ZT98 887 aa15.31■□□□□ 0.04
PABPC1-208ENST00000519004 STOX1Q6ZVD7 989 aa15.31■□□□□ 0.04
PABPC1-208ENST00000519004 SENP3Q9H4L4 574 aaPredicted RBP15.31■□□□□ 0.04
PABPC1-208ENST00000519004 TEX33O43247 280 aa15.3■□□□□ 0.04
PABPC1-208ENST00000519004 PPP1R12BO60237 982 aaPredicted RBP15.3■□□□□ 0.04
PABPC1-208ENST00000519004 MFAP3LO75121 409 aa15.3■□□□□ 0.04
PABPC1-208ENST00000519004 A1BGP04217 495 aa15.3■□□□□ 0.04
PABPC1-208ENST00000519004 NBPF14Q5TI25 921 aa15.3■□□□□ 0.04
PABPC1-208ENST00000519004 ANO1Q5XXA6 986 aa15.3■□□□□ 0.04
PABPC1-208ENST00000519004 C6orf89Q6UWU4 347 aa15.3■□□□□ 0.04
PABPC1-208ENST00000519004 RRP36Q96EU6 259 aaKnown RBP15.3■□□□□ 0.04
PABPC1-208ENST00000519004 FAM210AQ96ND0 272 aa15.3■□□□□ 0.04
PABPC1-208ENST00000519004 SCLT1Q96NL6 688 aa15.3■□□□□ 0.04
PABPC1-208ENST00000519004 EPN3Q9H201 632 aa15.3■□□□□ 0.04
PABPC1-208ENST00000519004 HOOK1Q9UJC3 728 aaKnown RBP15.3■□□□□ 0.04
PABPC1-208ENST00000519004 GGA2Q9UJY4 613 aa15.3■□□□□ 0.04
PABPC1-208ENST00000519004 FAM184BQ9ULE4 1060 aa15.3■□□□□ 0.04
PABPC1-208ENST00000519004 PCDHA5Q9Y5H7 936 aa15.3■□□□□ 0.04
PABPC1-208ENST00000519004 ARAP3Q8WWN8 1544 aa15.3■□□□□ 0.04
PABPC1-208ENST00000519004 SNUPNO95149 360 aaKnown RBP15.29■□□□□ 0.04
PABPC1-208ENST00000519004 RPSAP08865 295 aaKnown RBP15.29■□□□□ 0.04
PABPC1-208ENST00000519004 GBP2P32456 591 aaPredicted RBP15.29■□□□□ 0.04
PABPC1-208ENST00000519004 LSP1P33241 339 aa15.29■□□□□ 0.04
PABPC1-208ENST00000519004 CPLX3Q8WVH0 158 aa15.29■□□□□ 0.04
PABPC1-208ENST00000519004 HDAC6Q9UBN7 1215 aa15.29■□□□□ 0.04
PABPC1-208ENST00000519004 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.29■□□□□ 0.04
PABPC1-208ENST00000519004 CACNA1FO60840 1977 aa15.29■□□□□ 0.04
PABPC1-208ENST00000519004 POGZQ7Z3K3 1410 aa15.29■□□□□ 0.04
PABPC1-208ENST00000519004 OPA1O60313 960 aa15.29■□□□□ 0.04
PABPC1-208ENST00000519004 MARCKSP29966 332 aaPredicted RBP15.29■□□□□ 0.04
PABPC1-208ENST00000519004 SHC4Q6S5L8 630 aa15.29■□□□□ 0.04
PABPC1-208ENST00000519004 TRMT44Q8IYL2 757 aaKnown RBP15.29■□□□□ 0.04
PABPC1-208ENST00000519004 ENOX1Q8TC92 643 aaKnown RBP15.29■□□□□ 0.04
PABPC1-208ENST00000519004 LMBR1Q8WVP7 490 aa15.29■□□□□ 0.04
PABPC1-208ENST00000519004 SPDL1Q96EA4 605 aa15.29■□□□□ 0.04
PABPC1-208ENST00000519004 THOC1Q96FV9 657 aaKnown RBP15.29■□□□□ 0.04
PABPC1-208ENST00000519004 MED15Q96RN5 788 aa15.29■□□□□ 0.04
PABPC1-208ENST00000519004 SAMSN1Q9NSI8 373 aaKnown RBP15.29■□□□□ 0.04
PABPC1-208ENST00000519004 SSBP05455 408 aaKnown RBP eCLIP15.28■□□□□ 0.04
PABPC1-208ENST00000519004 PBX1P40424 430 aa15.28■□□□□ 0.04
PABPC1-208ENST00000519004 IFT88Q13099 833 aa15.28■□□□□ 0.04
PABPC1-208ENST00000519004 IDI1Q13907 227 aa15.28■□□□□ 0.04
PABPC1-208ENST00000519004 SND1Q7KZF4 910 aaKnown RBP eCLIP15.28■□□□□ 0.04
PABPC1-208ENST00000519004 PPFIBP1Q86W92 1011 aa15.28■□□□□ 0.04
PABPC1-208ENST00000519004 COG3Q96JB2 828 aa15.28■□□□□ 0.04
PABPC1-208ENST00000519004 PLCD4Q9BRC7 762 aa15.28■□□□□ 0.04
PABPC1-208ENST00000519004 PHAXQ9H814 394 aaKnown RBP15.28■□□□□ 0.04
PABPC1-208ENST00000519004 ACTR5Q9H9F9 607 aaPredicted RBP15.28■□□□□ 0.04
PABPC1-208ENST00000519004 LAMA4Q16363 1823 aa15.28■□□□□ 0.04
PABPC1-208ENST00000519004 FAM237AA0A1B0GTK4 181 aa15.28■□□□□ 0.04
PABPC1-208ENST00000519004 SLC8A1P32418 973 aa15.28■□□□□ 0.04
PABPC1-208ENST00000519004 ATP1A2P50993 1020 aa15.28■□□□□ 0.04
PABPC1-208ENST00000519004 ERVK-24P63145 666 aa15.28■□□□□ 0.04
PABPC1-208ENST00000519004 HDLBPQ00341 1268 aaKnown RBP15.28■□□□□ 0.04
PABPC1-208ENST00000519004 TRAF1Q13077 416 aa15.28■□□□□ 0.04
PABPC1-208ENST00000519004 APTXQ7Z2E3 356 aaKnown RBP15.28■□□□□ 0.04
PABPC1-208ENST00000519004 UBE3BQ7Z3V4 1068 aa15.28■□□□□ 0.04
PABPC1-208ENST00000519004 TICAM2Q86XR7 235 aa15.28■□□□□ 0.04
PABPC1-208ENST00000519004 ZBTB10Q96DT7 871 aa15.28■□□□□ 0.04
PABPC1-208ENST00000519004 CCDC114Q96M63 670 aa15.28■□□□□ 0.04
PABPC1-208ENST00000519004 AGXT2Q9BYV1 514 aa15.28■□□□□ 0.04
PABPC1-208ENST00000519004 BOLA2Q9H3K6 86 aa15.28■□□□□ 0.04
PABPC1-208ENST00000519004 PA2G4Q9UQ80 394 aaKnown RBP15.28■□□□□ 0.04
PABPC1-208ENST00000519004 NCAPD2Q15021 1401 aa15.27■□□□□ 0.04
PABPC1-208ENST00000519004 TTC36A6NLP5 189 aa15.27■□□□□ 0.04
PABPC1-208ENST00000519004 KIF28PB7ZC32 967 aa15.27■□□□□ 0.04
PABPC1-208ENST00000519004 SRGAP2O75044 1071 aa15.27■□□□□ 0.04
PABPC1-208ENST00000519004 PEX19P40855 299 aa15.27■□□□□ 0.04
PABPC1-208ENST00000519004 RPS6KA3P51812 740 aa15.27■□□□□ 0.04
PABPC1-208ENST00000519004 HDGFP51858 240 aaKnown RBP15.27■□□□□ 0.04
PABPC1-208ENST00000519004 RBBP5Q15291 538 aaKnown RBP15.27■□□□□ 0.04
PABPC1-208ENST00000519004 ACCSLQ4AC99 568 aa15.27■□□□□ 0.04
PABPC1-208ENST00000519004 DHX32Q7L7V1 743 aaKnown RBP15.27■□□□□ 0.04
PABPC1-208ENST00000519004 NUTM2AQ8IVF1 878 aaPredicted RBP15.27■□□□□ 0.04
PABPC1-208ENST00000519004 HAUS2Q9NVX0 235 aa15.27■□□□□ 0.04
PABPC1-208ENST00000519004 IRAK4Q9NWZ3 460 aa15.27■□□□□ 0.04
PABPC1-208ENST00000519004 CPSF2Q9P2I0 782 aaKnown RBP15.27■□□□□ 0.04
PABPC1-208ENST00000519004 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
PABPC1-208ENST00000519004 CPS1P31327 1500 aa15.27■□□□□ 0.04
PABPC1-208ENST00000519004 ENC1O14682 589 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms