RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 NPM2Q86SE8 214 aaKnown RBP8.05□□□□□ -1.12
PABPC1-207ENST00000518716 LARGE2Q8N3Y3 721 aa8.05□□□□□ -1.12
PABPC1-207ENST00000518716 RSPH6AQ9H0K4 717 aa8.05□□□□□ -1.12
PABPC1-207ENST00000518716 RUBCNLQ9H714 662 aa8.05□□□□□ -1.12
PABPC1-207ENST00000518716 IBTKQ9P2D0 1353 aaPredicted RBP8.05□□□□□ -1.12
PABPC1-207ENST00000518716 NPC1L1Q9UHC9 1359 aa8.05□□□□□ -1.12
PABPC1-207ENST00000518716 A0A1B0GTH6 734 aa8.04□□□□□ -1.12
PABPC1-207ENST00000518716 NOGQ13253 232 aa8.04□□□□□ -1.12
PABPC1-207ENST00000518716 GRM1Q13255 1194 aa8.04□□□□□ -1.12
PABPC1-207ENST00000518716 DGKZQ13574 1117 aa8.04□□□□□ -1.12
PABPC1-207ENST00000518716 CYP2U1Q7Z449 544 aa8.04□□□□□ -1.12
PABPC1-207ENST00000518716 ZNF34Q8IZ26 560 aa8.04□□□□□ -1.12
PABPC1-207ENST00000518716 GLIS2Q9BZE0 524 aaPredicted RBP8.04□□□□□ -1.12
PABPC1-207ENST00000518716 NYXQ9GZU5 481 aa8.04□□□□□ -1.12
PABPC1-207ENST00000518716 ZNRF3Q9ULT6 936 aa8.04□□□□□ -1.12
PABPC1-207ENST00000518716 UBN2Q6ZU65 1347 aa8.03□□□□□ -1.12
PABPC1-207ENST00000518716 CDHR2Q9BYE9 1310 aa8.03□□□□□ -1.12
PABPC1-207ENST00000518716 CLSPNQ9HAW4 1339 aa8.03□□□□□ -1.12
PABPC1-207ENST00000518716 FAM177BA6PVY3 158 aa8.03□□□□□ -1.12
PABPC1-207ENST00000518716 NEURL1BA8MQ27 555 aa8.03□□□□□ -1.12
PABPC1-207ENST00000518716 BNIP3LO60238 219 aa8.03□□□□□ -1.12
PABPC1-207ENST00000518716 GMPSP49915 693 aaPredicted RBP8.03□□□□□ -1.12
PABPC1-207ENST00000518716 LBRQ14739 615 aaKnown RBP8.03□□□□□ -1.12
PABPC1-207ENST00000518716 SLC10A5Q5PT55 438 aa8.03□□□□□ -1.12
PABPC1-207ENST00000518716 SUSD4Q5VX71 490 aa8.03□□□□□ -1.12
PABPC1-207ENST00000518716 CHSY3Q70JA7 882 aa8.03□□□□□ -1.12
PABPC1-207ENST00000518716 NIM1KQ8IY84 436 aa8.03□□□□□ -1.12
PABPC1-207ENST00000518716 TRIM11Q96F44 468 aa8.03□□□□□ -1.12
PABPC1-207ENST00000518716 OSBPL3Q9H4L5 887 aa8.03□□□□□ -1.12
PABPC1-207ENST00000518716 TPSG1Q9NRR2 321 aa8.03□□□□□ -1.12
PABPC1-207ENST00000518716 RAB6BQ9NRW1 208 aa8.03□□□□□ -1.12
PABPC1-207ENST00000518716 SAGE1Q9NXZ1 904 aa8.03□□□□□ -1.12
PABPC1-207ENST00000518716 ATP6V0A2Q9Y487 856 aa8.03□□□□□ -1.12
PABPC1-207ENST00000518716 MAP3K15Q6ZN16 1313 aa8.03□□□□□ -1.12
PABPC1-207ENST00000518716 NUP98P52948 1817 aa8.02□□□□□ -1.13
PABPC1-207ENST00000518716 PPIP5K2O43314 1243 aa8.02□□□□□ -1.13
PABPC1-207ENST00000518716 HTATSF1O43719 755 aaKnown RBP8.02□□□□□ -1.13
PABPC1-207ENST00000518716 TRAK2O60296 914 aa8.02□□□□□ -1.13
PABPC1-207ENST00000518716 AP1G2O75843 785 aa8.02□□□□□ -1.13
PABPC1-207ENST00000518716 NTSR2O95665 410 aa8.02□□□□□ -1.13
PABPC1-207ENST00000518716 ARAFP10398 606 aa8.02□□□□□ -1.13
PABPC1-207ENST00000518716 PRKAR2BP31323 418 aa8.02□□□□□ -1.13
PABPC1-207ENST00000518716 AOC3Q16853 763 aa8.02□□□□□ -1.13
PABPC1-207ENST00000518716 DLK2Q6UY11 383 aa8.02□□□□□ -1.13
PABPC1-207ENST00000518716 TTLL7Q6ZT98 887 aa8.02□□□□□ -1.13
PABPC1-207ENST00000518716 CDC37L1Q7L3B6 337 aa8.02□□□□□ -1.13
PABPC1-207ENST00000518716 MCM10Q7L590 875 aa8.02□□□□□ -1.13
PABPC1-207ENST00000518716 LRP10Q7Z4F1 713 aa8.02□□□□□ -1.13
PABPC1-207ENST00000518716 TRPM4Q8TD43 1214 aa8.02□□□□□ -1.13
PABPC1-207ENST00000518716 RBM17Q96I25 401 aaKnown RBP8.02□□□□□ -1.13
PABPC1-207ENST00000518716 POLR2AP24928 1970 aaKnown RBP8.01□□□□□ -1.13
PABPC1-207ENST00000518716 SHTN1A0MZ66 631 aa8.01□□□□□ -1.13
PABPC1-207ENST00000518716 YDJCA8MPS7 323 aa8.01□□□□□ -1.13
PABPC1-207ENST00000518716 U2SURPO15042 1029 aaKnown RBP8.01□□□□□ -1.13
PABPC1-207ENST00000518716 DYRK3O43781 588 aa8.01□□□□□ -1.13
PABPC1-207ENST00000518716 GTF2E1P29083 439 aaPredicted RBP8.01□□□□□ -1.13
PABPC1-207ENST00000518716 KIAA2012Q0VF49 1180 aa8.01□□□□□ -1.13
PABPC1-207ENST00000518716 CC2D1BQ5T0F9 858 aaKnown RBP8.01□□□□□ -1.13
PABPC1-207ENST00000518716 PNMA1Q8ND90 353 aa8.01□□□□□ -1.13
PABPC1-207ENST00000518716 RPGRQ92834 1020 aaKnown RBP8.01□□□□□ -1.13
PABPC1-207ENST00000518716 RNF186Q9NXI6 227 aa8.01□□□□□ -1.13
PABPC1-207ENST00000518716 PODXL2Q9NZ53 605 aa8.01□□□□□ -1.13
PABPC1-207ENST00000518716 BBOX1O75936 387 aa8□□□□□ -1.13
PABPC1-207ENST00000518716 IL2RAP01589 272 aa8□□□□□ -1.13
PABPC1-207ENST00000518716 MSX1P28360 303 aa8□□□□□ -1.13
PABPC1-207ENST00000518716 SOX10P56693 466 aa8□□□□□ -1.13
PABPC1-207ENST00000518716 HUNKP57058 714 aa8□□□□□ -1.13
PABPC1-207ENST00000518716 DCTN1Q14203 1278 aa8□□□□□ -1.13
PABPC1-207ENST00000518716 TAF7Q15545 349 aaPredicted RBP8□□□□□ -1.13
PABPC1-207ENST00000518716 RGMBQ6NW40 437 aa8□□□□□ -1.13
PABPC1-207ENST00000518716 USP48Q86UV5 1035 aa8□□□□□ -1.13
PABPC1-207ENST00000518716 SP8Q8IXZ3 490 aa8□□□□□ -1.13
PABPC1-207ENST00000518716 CSRNP1Q96S65 589 aa8□□□□□ -1.13
PABPC1-207ENST00000518716 GOLGA2P5Q9HBQ8 144 aa8□□□□□ -1.13
PABPC1-207ENST00000518716 CNOT7Q9UIV1 285 aaKnown RBP8□□□□□ -1.13
PABPC1-207ENST00000518716 ABCC4O15439 1325 aa8□□□□□ -1.13
PABPC1-207ENST00000518716 TCERG1O14776 1098 aaKnown RBP7.99□□□□□ -1.13
PABPC1-207ENST00000518716 EGFRP00533 1210 aa7.99□□□□□ -1.13
PABPC1-207ENST00000518716 SPATA31C1P0DKV0 1188 aa7.99□□□□□ -1.13
PABPC1-207ENST00000518716 GPTP24298 496 aa7.99□□□□□ -1.13
PABPC1-207ENST00000518716 KIF23Q02241 960 aaPredicted RBP7.99□□□□□ -1.13
PABPC1-207ENST00000518716 CENPCQ03188 943 aa7.99□□□□□ -1.13
PABPC1-207ENST00000518716 TNIP1Q15025 636 aa7.99□□□□□ -1.13
PABPC1-207ENST00000518716 NBPF11Q86T75 865 aa7.99□□□□□ -1.13
PABPC1-207ENST00000518716 PGBD3Q8N328 593 aa7.99□□□□□ -1.13
PABPC1-207ENST00000518716 PROCA1Q8NCQ7 364 aaPredicted RBP7.99□□□□□ -1.13
PABPC1-207ENST00000518716 SUPT20HQ8NEM7 779 aa7.99□□□□□ -1.13
PABPC1-207ENST00000518716 DPF2Q92785 391 aa7.99□□□□□ -1.13
PABPC1-207ENST00000518716 ESYT1Q9BSJ8 1104 aa7.99□□□□□ -1.13
PABPC1-207ENST00000518716 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.99□□□□□ -1.13
PABPC1-207ENST00000518716 PLVAPQ9BX97 442 aa7.99□□□□□ -1.13
PABPC1-207ENST00000518716 MIS18AQ9NYP9 233 aa7.99□□□□□ -1.13
PABPC1-207ENST00000518716 KLF15Q9UIH9 416 aa7.99□□□□□ -1.13
PABPC1-207ENST00000518716 HCN2Q9UL51 889 aa7.99□□□□□ -1.13
PABPC1-207ENST00000518716 PCDHB9Q9Y5E1 797 aa7.99□□□□□ -1.13
PABPC1-207ENST00000518716 HRH3Q9Y5N1 445 aa7.99□□□□□ -1.13
PABPC1-207ENST00000518716 KIAA0100Q14667 2235 aaKnown RBP7.98□□□□□ -1.13
PABPC1-207ENST00000518716 DUOX1Q9NRD9 1551 aa7.98□□□□□ -1.13
PABPC1-207ENST00000518716 TRPA1O75762 1119 aa7.98□□□□□ -1.13
PABPC1-207ENST00000518716 RAD17O75943 681 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms